Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterocephalus_20glaber_20[refseq_20GCF_5F000247695.1_202012-02-17] 4,229 sequences; 2,618,204,639 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq34 87.8 1e-12 >seq34 Length=23970518 Score = 87.8 bits (96), Expect = 1e-12 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 22748 TGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGC 22807 ||||||| ||||| || ||||| || | || || ||||| ||||||||||| ||||||| Sbjct 19377193 TGGCCTTCGCGGCCGTGGAAGGAGTGTTCTTCTCGGGGTCCTTTGCGGCCATCTTCTGGC 19377134 Query 22808 TGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACG 22867 ||||||| | |||||||| || | | || ||||||||| | || ||| | |||| Sbjct 19377133 TGAAGAAGAGAGGCCTCATGCCGGGCCTCACCTTCTCCAACGAGCTCATCAGCAGAGACG 19377074 Query 22868 A 22868 | Sbjct 19377073 A 19377073 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356215239386287