Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterocephalus_20glaber_20[refseq_20GCF_5F000247695.1_202012-02-17] 4,229 sequences; 2,618,204,639 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq148 192 1e-43 seq16 181 2e-40 seq126 159 8e-34 seq117 156 1e-32 seq39 154 3e-32 seq26 143 6e-29 seq35 136 9e-27 seq52 116 9e-21 seq17 102 2e-16 seq41 95.1 3e-14 seq73 86.0 1e-11 >seq148 Length=4887613 Score = 192 bits (212), Expect = 1e-43 Identities = 183/234 (78%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| ||||| || | ||| || || || | ||||| |||||||| || || |||||| Sbjct 4050771 ATTCCACCTCTCAGGCGAAGGACCAGGTGCAGAGTAGACTCTTTCTGGATGTTGTAGTCA 4050830 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || ||||| | || ||||| || ||||| || ||||| || |||||||| || |||||| Sbjct 4050831 GAAAGAGTGCGGCCATCTTCAAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGA 4050890 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || |||||||||||||| ||||| || || ||||| || | |||||| || ||||| Sbjct 4050891 GGGATGCCTTCTTTATCCTGGATCTTGGCCTTCACATTCTCAATGGTATCACTGGGTTCC 4050950 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563 || ||||| || || ||||| ||||| || || || || || || ||||||||| Sbjct 4050951 ACTTCTAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAAATTTGCATTTTG 4051004 Score = 174 bits (192), Expect = 4e-38 Identities = 177/231 (77%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| || | || || || || | || || |||||||| ||||| || ||| Sbjct 4050543 ATCCCACCTCTCAGGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATATTGTAATCA 4050602 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || ||||| | || ||||| || || || || ||||| || |||||||| || || ||| Sbjct 4050603 GAAAGAGTGCGGCCATCTTCAAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGA 4050662 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || |||||||||||||| ||||| || |||||||| || | |||||| || ||||| Sbjct 4050663 GGGATGCCTTCTTTATCCTGGATCTTGGCCTTTACATTCTCAATGGTATCACTGGGTTCC 4050722 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || || || || ||||| ||||| || || || ||||| ||||||||| Sbjct 4050723 ACTTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATT 4050773 Score = 170 bits (188), Expect = 4e-37 Identities = 156/197 (79%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| ||||| |||||||| ||||| | || ||||| || || || || Sbjct 4050348 GTGGACTCCTTCTGGATATTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTCCCT 4050407 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || |||||||| || |||||||| || |||||||||||||| ||||| || || Sbjct 4050408 GCAAAGATGAGCCTCTGCTGGTCAGGAGGGATGCCTTCTTTATCCTGGATCTTGGCCTTC 4050467 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | |||||| ||||| || ||||| || || || ||||| ||||| || || Sbjct 4050468 ACATTCTCAATGGTATCACTAGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTC 4050527 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| |||||||| Sbjct 4050528 TTCACAAAGATCTGCAT 4050544 >seq16 Length=31725842 Score = 181 bits (200), Expect = 2e-40 Identities = 168/213 (79%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 || ||||| | || || || || ||||| || || ||||| | ||| | || ||||| Sbjct 21647043 ACAAGATGAAGGGTGGACTCCTTTTGAATGTTGTAATCAGACAAAGTACCTCCATCTTCC 21647102 Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470 ||||| || |||||||| || ||||| || ||||||||||| |||||||| |||||||| Sbjct 21647103 AGTTGCTTACCAGCAAAGATCAGCCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGG 21647162 Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530 ||||| |||||||||||||||| || || ||||| ||||| || || || ||||| Sbjct 21647163 ATCTTGGCTTTTACATTTTCTATAGTGTCTGAGGGTTCAACCTCGAGCGTGATGGTCTTC 21647222 Query 104531 CCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563 || ||||| ||||||||||| |||||||| ||| Sbjct 21647223 CCCGTAAGAGTTTTTACAAAAATCTGCATCTTG 21647255 >seq126 Length=6421402 Score = 159 bits (176), Expect = 8e-34 Identities = 154/198 (78%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 104366 GATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCA 104425 || || || ||||| || || || || | ||| | || | ||| ||||| || |||||| Sbjct 2409845 GACTCCTTTTGAATGTTGTAATCCGACAAAGTACGTCCATGTTCCAGTTGCTTACCAGCA 2409904 Query 104426 AAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACA 104485 || || |||| || ||||||||||| |||||||| |||||||| ||||| ||||||||| Sbjct 2409905 AAGATCAGCCCTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCTTTTACA 2409964 Query 104486 TTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTT 104545 ||||||| || || ||||| |||| ||||| || ||||| || ||||| |||||| Sbjct 2409965 TTTTCTATAGTGTCTGAGGGTTCAGCCTCAAGTGTGATGGTCTTCCCTGTAAGGGTTTTT 2410024 Query 104546 ACAAATATCTGCATTTTG 104563 || || |||||||| ||| Sbjct 2410025 ACGAAAATCTGCATCTTG 2410042 >seq117 Length=6347111 Score = 156 bits (172), Expect = 1e-32 Identities = 155/201 (77%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || |||||||| || |||||||| ||||| || ||||| || || || || Sbjct 1554178 GTGGACTCCTTCTGAATGTTGTAGTCAGAAAGAGTGTGGCCATCTTCCAGCTGCTTGCCT 1554119 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 | ||| || |||||||| || |||||||| || |||||||||||||| ||||| || ||| Sbjct 1554118 GTAAAGATGAGCCTCTGGTGGTCAGGAGGGATGCCTTCTTTATCCTGGATCTTGGCCTTT 1554059 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | |||||| || ||||| || || || || || ||||| ||||| || || Sbjct 1554058 ACATTCTCAATGGTATCACTGGGTTCCACTTCCAGAGTGATGGTCTTGCCAGTCAGGGTC 1553999 Query 104543 TTTACAAATATCTGCATTTTG 104563 || | || || ||||||||| Sbjct 1553998 TTCATGAAGATTTGCATTTTG 1553978 >seq39 Length=21454635 Score = 154 bits (170), Expect = 3e-32 Identities = 164/214 (77%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 || ||||| | || | || || ||||| || || ||||| | ||| | || ||||| Sbjct 17272287 ACAAGATGAAGGGTGAACTCCTTTTGAATGTTGTAATCAGACAAAGTACGTCCATCTTCC 17272228 Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470 ||||| || |||||||| || ||||| || |||||| |||| |||||||| |||||||| Sbjct 17272227 AGTTGCTTACCAGCAAAGATCAGCCTTTGCTGATCAAGAGGAATTCCTTCCTTATCCTGG 17272168 Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTA-GGTTCTACCTCTAGTGTAATAGTCTT 104529 ||||| ||||||||||||||| || || ||| ||||| ||||| || || || ||||| Sbjct 17272167 ATCTTGGCTTTTACATTTTCTGTTGTGTC-CTAGGGTTCAACCTCGAGCGTGATGGTCTT 17272109 Query 104530 ACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563 | ||| |||||||| || |||||||| ||| Sbjct 17272108 CTCCATAAAGGTTTTTACGAAAATCTGCATCTTG 17272075 >seq26 Length=26652979 Score = 143 bits (158), Expect = 6e-29 Identities = 393/597 (66%), Gaps = 9/597 (2%) Strand=Plus/Minus Query 268691 AACCCAGATAGATTTGTGATATTTCCAATACAGCATGGTGATATATGGAGGATGTACAAA 268750 ||||| ||| | |||||||| ||||| || || | |||| ||| |||||| || Sbjct 3408660 AACCCCGAT-GCTTTGTGATCTTTCCTATCGAGTACCACAATATTTGGCAGATGTATAAG 3408602 Query 268751 CAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACTTAATAGAT 268810 | |||| || || |||||||| | || | | ||||| || | ||| | | Sbjct 3408601 AAAGCCGAAGCCTCCTTTTGGACGGCTGAGG---TGGATCTTTCCAAAGACATTCAGCAC 3408545 Query 268811 TGGAAAAATTTAAAACCAGAAGAAAGAAGATTTATATCTTATATTCTTGCGTTTTTTGCA 268870 ||| || |||| || | || ||| ||||| || || | || | || ||||| Sbjct 3408544 TGGGAAGCACTAAAGCCTGGGGAGAGATATTTTATTTCACATGTCCTCTCTTTCTTTGCT 3408485 Query 268871 GTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAGATT 268930 | || ||||| || | ||||| ||||| || ||| || | ||||| || |||||| Sbjct 3408484 GCCAGCGATGGCATACTCAACGAGAATCTGGTGGAGCGATTTAGCCAAGAAGTTCAGATT 3408425 Query 268931 CCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGATG 268990 | |||||| | ||||| || || ||||| || || || |||||||| ||||| || ||| Sbjct 3408424 ACAGAAGCCCGCTGTTTCTATGGCTTCCAAATTGCCATGGAAAATATCCATTCTGAAATG 3408365 Query 268991 TACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAAGACTATTTTCT 269050 |||||||| | || || ||||| | | || ||| |||| | || ||| | Sbjct 3408364 TACAGTCTCCTTATTGACACTTACGTTAAAGACTCCAAAGAAAGAGAGTTTCTGTTTACC 3408305 Query 269051 TCTAT-GAGAACTATGGACTGTGTGAGaaaaaaaTCTGAATGGGCTCTGAAATGGATAAA 269109 | || ||| || ||| ||| ||| || || | || ||||| || ||| | Sbjct 3408304 ACCATCGAG-ACCATGCCCTGCATGAAGAAGAAGGCGGACTGGGCCTTGCGCTGGCTTGG 3408246 Query 269110 CGATAGCGCG---CCTTACGGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATT 269166 || | | | | || |||||| | | |||| |||||||| | ||||| || || Sbjct 3408245 GGACAAAGAGGTCACCTATGGAGAACGTGTGCTTGCCTTTGCCGCCATGGAAGGGATCTT 3408186 Query 269167 CTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATT 269226 |||||| || |||||||| | ||||| | | | |||||| || | ||||| || | Sbjct 3408185 CTTTTCCGGTTCTTTTGCGTCGATCTTCTTGCTCAAGAAACAGGGAATAATGCCTGGTCT 3408126 Query 269227 AACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTG 269283 || || || ||| | | | ||||| ||||| || || ||||| ||||| || || Sbjct 3408125 CACCTTTTCCAACTGACTTACTAGCAGAGACGAGGGCTTGCACTGTGACTTTGCCTG 3408069 >seq35 Length=22943593 Score = 136 bits (150), Expect = 9e-27 Identities = 149/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 104366 GATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCA 104425 || || || ||||| || || ||||| | || || ||||| | ||| || |||||| Sbjct 21587369 GACTCCTTTTGAATGTTGTAATCAGACAAAGCATGTCCATCTTCCACTTGCTTACCAGCA 21587310 Query 104426 AAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACA 104485 || || ||| | || ||||||||||| |||||||| |||||||| ||||| || | |||| Sbjct 21587309 AATATCAGCTTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTCTACA 21587250 Query 104486 TTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTT 104545 ||||||| ||||| |||| ||||| || || || ||||| | | ||| |||||| Sbjct 21587249 TTTTCTATAGTATCTGAGAGTTCAACCTCAAGAGTGATGGTCTTCCTTGCAAGAGTTTTT 21587190 Query 104546 ACAAATATCTGCATTTTG 104563 ||||| ||||| || ||| Sbjct 21587189 ACAAAAATCTGTATCTTG 21587172 >seq52 Length=15405845 Score = 116 bits (128), Expect = 9e-21 Identities = 123/162 (76%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 || ||||| ||| || |||||||| || |||||||| ||||||||||| ||||||| Sbjct 7919933 CCATCTTCCAGTCACTTACCAGCAAAGATCAGCCTCTGCTGATCAGGAGGAGTTCCTTCC 7919874 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521 || |||| ||||| | |||||||||||| | || ||||| |||| ||||| Sbjct 7919873 TTGTCCTTGATCTTGACCTTTACATTTTCTGTAATGTCTGAGGGTTCAGCCTCGAGTGTG 7919814 Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563 || ||||| || ||||| ||||||| || |||||||| ||| Sbjct 7919813 ATGGTCTTCCCCGTAAGAGTTTTTATGAAAATCTGCATCTTG 7919772 >seq17 Length=29327949 Score = 102 bits (112), Expect = 2e-16 Identities = 144/201 (72%), Gaps = 10/201 (5%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 ||| |||| |||||||| || |||||||| | ||| || ||||| ||||| || | | Sbjct 17447669 GTAAATTCCTTCTGAATGTTGTAGTCAGACAAAGTATGTCCATCTTCCAGTTGCTTACAA 17447728 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 | || | || |||| |||||| |||||||| ||||||| |||| |||||| Sbjct 17447729 GTAAT--------TTTGCTGAT-AGGAGGCATTCCTTCCCTATCCTGGATCTGGGCTTTT 17447779 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 |||||||||| ||| | | ||||| |||| || | || | ||| || ||||| | | Sbjct 17447780 ACATTTTCTATAGTA-CCCAGGGTTCAGCCTCAAGCATGATGGGCTTCCCTGTAAGAGCT 17447838 Query 104543 TTTACAAATATCTGCATTTTG 104563 |||| || || ||||| ||| Sbjct 17447839 TTTATGAAAATATGCATCTTG 17447859 >seq41 Length=20498451 Score = 95.1 bits (104), Expect = 3e-14 Identities = 127/177 (72%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || || || | || || || || | || || || ||||| ||||| |||||| Sbjct 848183 ATACCTCCCCTCAGGCAGAGCACCAGGTGCAGGGTGGACTCCTTCTGGATATTGTAGTCA 848242 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || || | || ||||| || || || || ||||| || ||||||||||| ||||| Sbjct 848243 GACAGGGTGCATCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGTTGGTCAGGG 848302 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT 104506 || ||||| || || || || ||||| || || | || || | ||| || || ||| Sbjct 848303 GGGATTCCCTCCTTGTCTTGGATCTTGGCCTTCATGTTCTCAATGGTGTCACTGGGT 848359 >seq73 Length=13357033 Score = 86.0 bits (94), Expect = 1e-11 Identities = 111/151 (74%), Gaps = 2/151 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| | | |||||||| || || | | |||||| ||||| || || Sbjct 11937831 GTGGACTCCTTCTGGGTGCTGTAGTCAGACAGTGTACATCTGTCTTCCAGTTGCTTACCT 11937890 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || |||| || |||||||| | || ||||| ||||||| |||| || ||| Sbjct 11937891 GCAAAGATCAGCCATTGCTGATCAGGTGA-ATCCCTTCCATATCCTGGATCTG-GCCTTT 11937948 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCT 104513 |||||||||| ||||| ||||| |||| Sbjct 11937949 ACATTTTCTATAGTATCCAAGGGTTCAACCT 11937979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151336012557132