Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterocephalus_20glaber_20[refseq_20GCF_5F000247695.1_202012-02-17] 4,229 sequences; 2,618,204,639 total letters Query= NC_007051.1 Length=41318 Score E Sequences producing significant alignments: (Bits) Value seq371 230 6e-56 >seq371 Length=40469 Score = 230 bits (254), Expect = 6e-56 Identities = 285/390 (73%), Gaps = 0/390 (0%) Strand=Plus/Minus Query 24978 CTTGAAACAACTTTACCAACGACTTTAATTTCATCGTCATTTGTATAAACTTGTGGTAAA 25037 |||| || ||| |||| || | ||||| |||||| | | ||| |||||||| || Sbjct 8005 CTTGCTACCACTCTACCTACTATTTTAACTTCATCATTCAATCCATATACTTGTGGATAA 7946 Query 25038 TGGTCGCTATTGTTAGATTCAGGTAATAAAATAATTTTATCTTCGTTGTATCTAATTCGT 25097 || | |||||| |||||||||| ||| ||||||| |||| |||| |||||||| || Sbjct 7945 TGATTAGGATTGTTGGATTCAGGTATTAATATAATTTGATCTCCGTTATATCTAATGCGC 7886 Query 25098 TTTACAGTTGCGTTATATCCATTGACGTTTACTACACCAATTTGACCATTTTCTACCACA 25157 ||||||||||| || || || || | | || ||||| | |||||||||||| || | Sbjct 7885 TTTACAGTTGCATTGTAACCGTTAATCATAACAACACCTAATTGACCATTTTCAACAGTA 7826 Query 25158 GAATCTTTTTCTACTACTACCACATCTCCTTCACGAAATTCTTTGTCCATTGAATCGCCA 25217 ||||||||||| | ||||| ||||| || || ||||| ||| ||||| |||||| Sbjct 7825 GAATCTTTTTCAATCACTACAACATCGCCATCTTGAAATATTTTATCCATACTGTCGCCA 7766 Query 25218 GAAACTTTTAATCCGAACAACTCTTTGCCACCTTTAGTCATTTGAGAAGGTATGTATGTA 25277 || ||||| | || || |||||| | | | | | | || || | |||| | Sbjct 7765 GACACTTTAAGACCAAATTCCTCTTTATTAGAATCAATTTTATCAGTAGCAAAGTATATG 7706 Query 25278 TATTCGATTATATTTTCTTCTGTGTAGATAGGTAATCCAGCACTTATTTTTGCTACAACT 25337 || || |||| |||||||||| |||||||||||| |||||| |||||| | |||||| Sbjct 7705 TAATCAATTAAGTTTTCTTCTGAGTAGATAGGTAAACCAGCAGATATTTTAGAAACAACT 7646 Query 25338 GGAATTGCTGTAACAGGTAATGTGTCAATT 25367 |||||| | |||| |||| ||| |||||| Sbjct 7645 GGAATTTTTTTAACTGGTAGTGTTTCAATT 7616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132089366221440