Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterocephalus_20glaber_20[refseq_20GCF_5F000247695.1_202012-02-17] 4,229 sequences; 2,618,204,639 total letters Query= NC_007055.1 Length=43681 Score E Sequences producing significant alignments: (Bits) Value seq371 360 5e-95 >seq371 Length=40469 Score = 360 bits (398), Expect = 5e-95 Identities = 1443/2248 (64%), Gaps = 76/2248 (3%) Strand=Plus/Minus Query 14704 AATGTCGATGAGTTTGGTGCTGATCCAACAGGTGTTAAAGATAGTACAAACGCATTTGTT 14763 ||||| |||| | |||||| || ||||| || | |||| ||| | || ||| Sbjct 22929 AATGTGAATGATTATGGTGCAGACCCAACGGGGCAAACAGATTCTACGGAAGCGTTTAAA 22870 Query 14764 AAAGCATTTGGCAATGGGAATGTACAAGTTACGATGTCTGCTGGGACTTATAAAGTCTAT 14823 ||||| | | ||| ||||| || | ||| |||| || ||||| | | | Sbjct 22869 AAAGCGGTGCGAGGTGGAAATGTTCATGCACACATGACTGCGGGCACTTACATCATTAGT 22810 Query 14824 GGTTTAAAATTACCAAATAACACACGCTTAGTCGGACAAGGTAAAGATATAACAACAATT 14883 || | ||||| ||||| || ||| ||| ||| |||||| ||||| || | | Sbjct 22809 GGACTTAAATTGCCAAACAATACAGTATTATCCGGTGAAGGTATTGATATCACTAATTTG 22750 Query 14884 AAATTAGCAGATGAAGCGCCAGCTGAAACGGTCGTCATTACTAACTTATCTATGGGCGGT 14943 ||| | |||||| || |||||| ||||| | | ||||| || |||| ||| Sbjct 22749 AAAATTGCAGATACTGCACCAGCTCAAACGATAGGTATTACAAATGAGGATATGACAGGT 22690 Query 14944 AATGCAAAAAATATTGCAATAGAAAACTTTAGTGTTGACGGTAATAGAAAACGTAAAAAC 15003 || |||| ||| ||| || || || || | |||| |||||| || | | |||| Sbjct 22689 AACGCAACAAACATTTATATTGATAATTTCACAATTGATGGTAATCGATACAGACAAAAT 22630 Query 15004 AATTCGTTGAAAGCAGCAGGAGGTTCTCTATCAAGCAATGTTCGCTTTGCAGGTGTTAAA 15063 || || || | || || ||||| | ||| || || || ||||| ||||||||| Sbjct 22629 AAAGTATTACAACCTGCGGGTGGTTCATTGTCATCTAACGTACGTTTTGCCGGTGTTAAA 22570 Query 15064 CATGGTTACATTTACAACATTAAGTCATTTAGTACGCTTTTACATGGAATTGATGTAACT 15123 ||| ||| || |||| ||| || | | |||||||| |||| | ||| Sbjct 22569 TTCGGTGGTGCTTATAAAGTTAAATCAATTGATGGTTTATTACATGGCTTTGACATCACT 22510 Query 15124 TATG-GCGTAGATGAATACTTTTACGGCGGAGATGGTGCTAGACCTAGCGAATCATTGGA 15182 |||| | || |||||||||| ||| || ||||||| ||| ||| ||| | | || Sbjct 22509 TATGCGAGT-GATGAATACTATTATCAAGGTGATGGTGTAAGAGTTAGTGAAGCGCTTGA 22451 Query 15183 AAGTAAGTATGTTCATGTAAATAATTGTGAGACTTACGATTTTGGCGATGATGGCATAAC 15242 |||||||||||| | ||| |||| || | | |||||||||||||| || || Sbjct 22450 AAGTAAGTATGTAACGATTGATAGTTGTATTGCTAAAGGCTTTGGCGATGATGGAATTAC 22391 Query 15243 TGTACATTGGAGTAGATACATTCTGATTACAGATTGTTATTCACATGATCCAATAGGCGG 15302 |||| |||||||| | |||| | |||||| || || ||| | Sbjct 22390 AACACATCATAGTAGATATTTAACAATTAGTAACAACTATTCAGCAGACCCTGTAGCAGC 22331 Query 15303 ---TGGA---AACAATAATGGTATTGAAGTTGATGACGGCTCTCAATTTGTGTTTTTATC 15356 | | || || ||||||||||| || ||||| | || ||| ||| | ||||| Sbjct 22330 CTCTCAACCTAATAACAATGGTATTGAGGTAGATGATGCTTCACAACATGTTATGTTATC 22271 Query 15357 TGATAACAAAACTGAAAACAACTATGGCGGATTAGAAATAAAAGCGCATGCTACAGCTAG 15416 |||||| ||||||||| | || || |||||||| |||||||||| || || | Sbjct 22270 GAATAACATTACTGAAAACTGTTTCGGTGGTTTAGAAATTAAAGCGCATGAGACTGCCAC 22211 Query 15417 CGCTCCTCAAAACATTTTTGTAAACAACCACATGTCTATTAGAGATACAC---GTT---- 15469 |||||| | || ||| || | ||| ||| || || | ||||| ||| Sbjct 22210 TGCTCCTAACAATATTCTTATCAACGGCCA----TCAATCA---ATACATTGTGTTAGAG 22158 Query 15470 CATACAATATTCGTCATATCGGGCATCATAAAGCAAGTGACCCTCAATCAAAAACTGCT- 15528 |||||||| | ||||| || || |||||||| | ||| || ||| | ||| | || Sbjct 22157 CATACAATTGGAGACATATTGGACACCATAAAGCTACTGATCCACAAACGAAATCAGCAC 22098 Query 15529 -TTTAATGTGGTATTAAGCAACTGTTCTT----CAGTCTATCCACAATTTAACGGTGTAT 15583 || ||| | || |||| || | || || | | || | || || | Sbjct 22097 ATTCAAT----TGTT--GCAAATGGTATTACTGCAATAGAGCCGGTAGACAATGGCAAGT 22044 Query 15584 ACCCTAATACAAGTCCTAGAGCAATCGTAGTATGCGCATTCCGTAATGTGCTTATAAATA 15643 | || ||| |||||||| || | || | |||| ||| || || | | || Sbjct 22043 ATCCAGGAGCAACACCTAGAGCCATGATTGTGTCTGCATACCGAAACGTTCAAGTTAACG 21984 Query 15644 ATTTCAGTGCATTAGGAGACTCTAAATGGAGTAGTGGTCAACCGGTA---GCAGTTGTCC 15700 ||| | |||| |||| | | | | || ||||||| | |||||| | Sbjct 21983 GTTTTACTGCAATAGGTAGTGGTGAGTTTATGGCAGGGCAACCGGCAATTGCAGTT---C 21927 Query 15701 AGTACAGAGCAGAAAACGTAACGTTTAATGGCGTTAATATTCAAGGCTTTTCCACAGCTA 15760 | || |||| || || |||| ||| || | ||||| || || | || | Sbjct 21926 AATATCGAGCTGAGAATGTAATGTTGAACAATTTAAATATCACTGGTTTCGTTAATGCAA 21867 Query 15761 GTGCGGACTTAAAAATTATGGGTGGAAATAACAGACCTAAAAAGATTACTTTCGCCAATG 15820 ||| || |||||||||||||||| ||||| |||||||| || |||| | | ||| Sbjct 21866 GTGAAGATATAAAAATTATGGGTGGTAATAATAGACCTAAGAACGTTACGATTTCAAATT 21807 Query 15821 TTAATTTGTACAAATCATCTAAAACGACTGGTATTTCTGGTGGTTCTAAAGTTTATGATA 15880 | ||| | | || |||||||| | | || ||| ||| ||||||||||||||||| | Sbjct 21806 TGAATATTTGGAACTCATCTAAGAATATTGCTATCGGTGGCGGTTCTAAAGTTTATGACA 21747 Query 15881 CGAAGATAATCGGTGGTAACTTAATCGGTGCAGGTACTGGTAACGCAATAGAGATGTATA 15940 | | || || || |||||| ||| || ||||| | | || ||||||| Sbjct 21746 CTAGAATTATAAATGCTAACTTGCAAGGTAATGGCACTGGAACAGGTGTATTTATGTATA 21687 Query 15941 ATAACACTGCCGAAATTGTGAATGTGCAAGCAGAAGGCTACACTAACCAAGCTGTTATCG 16000 ||||||||| ||| || | ||| ||||| ||| || ||||| || | || | Sbjct 21686 GTAACACTGCGGAACTTATTGGTGTTCAAGCTACAGGATATACTAATGCGGCAGACATTG 21627 Query 16001 CAGGCAGAAATTATTCTAAAGTCCCAACAGTTGTAAAAGGTGGTTTTAGCGGTGCTAGTA 16060 |||| | || ||| ||||| ||||| ||||||||||| || || || | | || Sbjct 21626 CAGGTAAGAAATATAATAAAGCTCCAACTGTTGTAAAAGGCGGATTCAGTGCAGGCTCTA 21567 Query 16061 CAGGTGGTGGAGCGTTAGCTGAAACATCTGCTTTGATNNNNNNNNNNNNNNNNTCATATG 16120 ||||| | ||| | || ||| ||||| | || | | || Sbjct 21566 CAGGTTCAGCAGCAGTTGCAGAACGTTCTGCGGTTATTGCTTCCACAGGTAATACTTTTG 21507 Query 16121 CTCACAGTAACAGAAGTTGGGTTGCAGGTTCAGGTATGAACTCACACGCTTATGGATCAC 16180 || ||| | |||||||||| |||||| ||||||||||||| | | ||||| |||| Sbjct 21506 CTTTTAGTGATAGAAGTTGGGCTGCAGGAACAGGTATGAACTCGAAAGTGTATGGGTCAC 21447 Query 16181 GTTCTTCAGTTCTCAACTCGCTTGAATCAGAAACAATACCAGGTAGTTACTGTCAAACGA 16240 || | | ||||||| | ||||||||||| | || ||||| | | |||||||| Sbjct 21446 GTAGCGCGATAATCAACTCATTAGAATCAGAAACGACACAAGGTAATCATACTCAAACGA 21387 Query 16241 TTGTCAACAGTCGCGGCGTAAAATCACCAGGTAATTATCATTTCTTATTAGGTTACGGAA 16300 || | || || || || ||| || || ||| | | | | || ||||||| Sbjct 21386 TTATGAATTCACGTGGTGTTAAAACAAATCAAAACTATGTTATTGCAATGGGATACGGAA 21327 Query 16301 CTAACGGAGCGAGAACATCAAATA--TAAAGATTGATATGTCATCTACAAGCGGTAATAT 16358 | || || || |||||| | | | ||| ||| | | || ||||| | Sbjct 21326 CAGGTGGCGCATCCACTGCAAATACTTCATTAGAGATTCGTC--CAATTAGTGGTAACTT 21269 Query 16359 CAAAACAGCAGGACAAGTTACAA--CAAGCAATAACTTTGCAGATTATGCGGAGTATTTC 16416 || || ||||||||| |||| | |||| || |||| || || || ||||||| Sbjct 21268 GAACACGAAAGGACAAGT-ACAATCCGGGCAA-AATTTTGGTGACTACGCAGAGTATTAT 21211 Query 16417 GAGTCACAAAGCGGTGGCGCAATCAGAAATGGTACCATTGTCACGTTAGAGGGTCGTTAT 16476 || || ||||| || | || | ||||||||||| ||| | || ||||||||| Sbjct 21210 GAATCCCAAAGTGGCCAACCGATTCTATTAGGTACCATTGTTACGCTTGATGGTCGTTAT 21151 Query 16477 ATTCGAAAATGCCAAGA-AAATGATGTGCCACTAGGCGTTGTATCTGGGACTGCAGGAAT 16535 ||||||||| || || | |||||||| || |||| || | || || |||||||| || Sbjct 21150 ATTCGAAAA-GCAAACATAAATGATGAACCTTTAGGTATTATTTCAGGCACTGCAGGTAT 21092 Query 16536 TATCTTAGGTGATCAAACTTTCCATCATAAAGATAGATTTGAACGTGATGAATTTGGTGT 16595 ||| ||||||| |||| | ||||| ||||||| ||| | ||||||||||||| Sbjct 21091 TATACTAGGTGACCAAATGTGGCATCACAAAGATAAATTCTTAAAAAATGAATTTGGTGT 21032 Query 16596 TATTCTAACTGAAGAACAATTAAAAA--CTTGGACAGATGATTCAGGAAATGAATACTCA 16653 | || ||||| | ||||||| ||| ||||||| ||| ||| || ||| Sbjct 21031 GACGCTCACTGA--ACTTGTTAAAAAGCAATGGCAAGATGATGAAGGCAATTGGTATTCA 20974 Query 16654 GAGTATGTTGAAGTTCCAATCGAACGTCCAGATTATGA----AG--AAAACGAATACTAT 16707 || | ||||| | || || ||| ||| |||| ||| || || ||||| | ||| Sbjct 20973 GAAGAAGTTGAGTTACCTATAGAAAATCCTGATTTTGATTCTAGCAAAGACGAAGAATAT 20914 Query 16708 GAATCACGTGAAGAACGTCCAGAGTGGAATGTTGTTGGACTAATCGGACAAATCTATATC 16767 |||||| ||||| ||||| |||||||| |||||| |||| |||||||| | | | Sbjct 20913 TTATCACGATCTGAACGCCCAGAATGGAATGTGGTTGGATTAATGGGACAAATAT-TCAC 20855 Query 16768 GCAGTA--GATAATACAGTA---GAAAAAGGCGATTGGATTC---GCTCACGAAACGGAA 16819 || ||| ||| ||| ||| | || | | | | || || || ||| || | Sbjct 20854 GC-GTATTGATGGTACTGTATCTGTGAATGACAA----AATCAAAGC-CAATAAA-GGTA 20802 Query 16820 AAGGTACGAAAGACAACGCTAACGGTTATTATCAAGTAATGGAAGTAACTACTCCATATA 16879 || |||||||| || || |||| |||| || | ||||| ||||| |||| | Sbjct 20801 TTGGAACGAAAGATAATAACAATGGTTTCTATCGTGTGTTAGAAGTTACTACACCATTTG 20742 Query 16880 ATCAAGAAAAAGGTTATGGCGTAGCAGT 16907 || ||||||||||| ||||| ||||| Sbjct 20741 ATTCTGAAAAAGGTTACGGCGTTGCAGT 20714 Score = 288 bits (318), Expect = 3e-73 Identities = 305/402 (76%), Gaps = 0/402 (0%) Strand=Plus/Minus Query 30480 TTAAAATAATTTTTGACTTGCTATAATTCTGCCAATAATTATGACTTCATCATTTTCTCC 30539 |||||| ||| |||||||||||| | ||| || | ||| | ||||||||||| ||| Sbjct 8021 TTAAAACAATCTTTGACTTGCTACCACTCTACCTACTATTTTAACTTCATCATTCAATCC 7962 Query 30540 ATACACTTGTGGATAATGATTTGTATTATTAGACTCCGGAATAAGTATAATTTGATCACC 30599 ||| ||||||||||||||||| | ||| || || || || || | |||||||||||| || Sbjct 7961 ATATACTTGTGGATAATGATTAGGATTGTTGGATTCAGGTATTAATATAATTTGATCTCC 7902 Query 30600 ATTGTATCTGACTCTCTTAACTGTAGCATTATAACCATTTATCATAACCACACCGAGTTG 30659 || ||||| | | ||| || || ||||| ||||| || |||||||| ||||| | ||| Sbjct 7901 GTTATATCTAATGCGCTTTACAGTTGCATTGTAACCGTTAATCATAACAACACCTAATTG 7842 Query 30660 GCCATTTTCTACCGCTGAATCTTTTTCTACAATAACTATATCTCCGTCATCAAATAATTT 30719 |||||||| || | ||||||||||| | | || | ||| || || | ||||| ||| Sbjct 7841 ACCATTTTCAACAGTAGAATCTTTTTCAATCACTACAACATCGCCATCTTGAAATATTTT 7782 Query 30720 GTCCATACTATCACCAGAAACCTTTAAACCGAATTCTTCTTTACCAGGCGCAAGGTCTTT 30779 |||||||| || ||||| || || | ||| ||||| |||||| || ||| | | Sbjct 7781 ATCCATACTGTCGCCAGACACTTTAAGACCAAATTCCTCTTTATTAGAATCAATTTTATC 7722 Query 30780 TTTAGCAAAGTATATGTAATCTATCAAATTTTCTTCGGTATAAATAGGCAGGCCTGCAGA 30839 ||||||||||||||||||| || || |||||||| | || ||||| | || ||||| Sbjct 7721 AGTAGCAAAGTATATGTAATCAATTAAGTTTTCTTCTGAGTAGATAGGTAAACCAGCAGA 7662 Query 30840 TATTTTCGCAAGTACTGGAATCTTTTTTACTGGTAATGTATC 30881 |||||| | || |||||||| ||||| ||||||| ||| || Sbjct 7661 TATTTTAGAAACAACTGGAATTTTTTTAACTGGTAGTGTTTC 7620 Score = 154 bits (170), Expect = 4e-33 Identities = 458/696 (66%), Gaps = 14/696 (2%) Strand=Plus/Minus Query 35513 GATGATTTACCTTTCTAGGAGTGGTTTTAAATGCAAAGAATCACTAATTACATTCAAGAA 35572 || |||||||| ||||| | ||| ||| ||| ||| | || ||||| ||| || Sbjct 4123 GACGATTTACCGTTCTAAG-GTGTGATTATATGGCGGTAATAAAAAACTACATCCAACAA 4065 Query 35573 GATGACGGTACAATTACTGCCGTCATCAAGAATGTAAAACTTGGCAACAAAGAAACCTTG 35632 |||| || ||||| ||||||||||| || ||||| |||| |||||||| || Sbjct 4064 AATGATGGCACAATAACTGCCGTCATTGAGGGTGTAACACTTACTAACAAAGACTTTTTA 4005 Query 35633 TTACTGGATAATGGAATGGATGTAGAAGTCGAAGTAAAGGTAGTAGATCCTTTTCTAATT 35692 |||| ||||| ||| | || || ||| | | ||| || || || || | ||| Sbjct 4004 CTACTTGATAACGGATTAGAAGTTGAATGCAATGTAGCAGTCGTTGACCCATACAAAATA 3945 Query 35693 AGCGATAAACAACGCCGGAAAATATTCGCT-TTATGTAATGACATAGAGAGC-CACACAG 35750 | ||||| ||||| | ||| |||||||| || || || || ||||| ||| || |||| Sbjct 3944 ACTGATAAGCAACGTAGAAAAGTATTCGCTCTTGTG-AACGATATAGA-AGCTCATACAG 3887 Query 35751 GGCAACCTCGAGACTATATGAGGTATTTGTTCATGGATTACGTAGAAGTCCTCTATGGGT 35810 | || | ||| ||||||||| || | ||| || || ||| || || || || | Sbjct 3886 GCACGCCACAAGATTATATGAGGAATGTATTCCAAGAATATGTACGTGTGCTATACGGCT 3827 Query 35811 ATGAAAAACGTCTCTCATTAAGCGACTGTACACGTACCCAAGCAAACCAAATCATAGAGG 35870 | || | || | ||| | || ||| | | | |||| ||||| ||||| | Sbjct 3826 ACGATGAGCGCATATCACTTGCTGATTGTTCTAGGAAAGTGGCAAGTCAAATTATAGATG 3767 Query 35871 TTACGCTTGATTGGATATTTCATAACAATATTCCATTAACTTATAAAACAAGCGACCTGC 35930 | | |||| |||||||| | ||||| || || | | ||||||||||| || || Sbjct 3766 TAGCAATTGAATGGATATTCGAGAACAACATCCCGCTCAGATATAAAACAAGTGATCTAA 3707 Query 35931 TTAAACAAGATAAATCTTTCTTGTACTGGTCTACAGTCAACCGTAACTGTGTTATCTGCG 35990 | || | || | | | || || ||| | |||| |||| | || || |||||||| | Sbjct 3706 TCAAGAATGACAGAACGTTTTTATACATGGCTACTATCAAGAGAAAGTGCGTTATCTGTG 3647 Query 35991 GTAAACCTCATTCAGACCTTGCACACCATTACGCAATAGGTAGAGGA---AAGAACCGTA 36047 | || ||| |||| || ||||| || | ||| ||||| | ||| || | || | Sbjct 3646 GCAA---GCATGCAGAGCTAGCACATTATCAAGCAGTAGGTCGTGGACGCAACAGACGCA 3590 Query 36048 AGACAATGAATCATTACGGATATGAAGTGTTAGCGCTATGCAGAGAGCATCATTCCGAGC 36107 ||| | ||| |||| | |||| |||| ||||| |||||| |||| Sbjct 3589 AGATA--GAA-CATTTTAACAACAAAGTATTAGGACTATGTTCCTTTCATCATAAAGAGC 3533 Query 36108 AGCATAACATAGGCGTAGACACATTCGATAAGAAATACCACTTAGAGAACAGTTGGATAA 36167 | || |||| ||| | || | ||| ||||||| || || ||||| || ||| | Sbjct 3532 AACACGACATGGGCATGGATAGTTTCAATAAGAAGTATCATTTAGAAAATTCATGGGTGG 3473 Query 36168 AAGTCGATGATCGGCTTAACAAAATGTTGAAAGGAG 36203 | || || || | || ||||||||| ||||||||| Sbjct 3472 ACGTTGACGAGAGACTAAACAAAATGCTGAAAGGAG 3437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139650586482614