Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterocephalus_20glaber_20[refseq_20GCF_5F000247695.1_202012-02-17] 4,229 sequences; 2,618,204,639 total letters Query= NC_007065.1 Length=43440 Score E Sequences producing significant alignments: (Bits) Value seq371 578 1e-160 >seq371 Length=40469 Score = 578 bits (640), Expect = 1e-160 Identities = 871/1234 (71%), Gaps = 9/1234 (1%) Strand=Plus/Minus Query 37343 GCAATTCGAAATTGAAAGCACAATAATCGCTACGCTACTTAAACAACCGGACGTACTAGA 37402 ||||| ||||||||||| || | ||||||| ||| | | |||| ||| | ||||| Sbjct 2370 GCAATATGAAATTGAAAGTACTGTCATCGCTAGTCTATTACAGAAACCTGACTTGCTAGA 2311 Query 37403 AAAGATAAGAGTTAAAGATTACATGTTTACGAACGAAAAGTTTAAAACCTTTTTCAATTA 37462 ||| ||||| ||||| |||||||| | ||| | |||||| ||| | ||||| Sbjct 2310 GAAGTTAAGAATTAAACCATACATGTTCCAAGATGAACATTTTAAAGAGTTTATGAATTA 2251 Query 37463 TGTAATGGACGCCGGAAAGATAGACCATCAAGAAATCTATTTAAAAGCAACTAAAGATAA 37522 | | || |||||| | || | || || ||| | || || || || Sbjct 2250 CATCTTAGATCAAGGAAAGGTTGATTTGAACGAGATATATCTCAAGAGTGTGAAGGACAA 2191 Query 37523 AGAGTTTTTAGATGCAGATACTATAACTAAACTTTACAACTCCGATTTCATTGGGTACGG 37582 | || ||| | ||| || |||||| | || ||||| |||| ||||| ||||| Sbjct 2190 ATCATTCTTAAGTAACGATGTAATTACTAAATTATATAACTCTAATTTTATTGGCTACGG 2131 Query 37583 CTTCTTTGAACGTTACCAACAAGAATTATTAGAAAGTTATCAACTTAACAAAGCGAATGA 37642 |||||||| | || |||||||| |||||| ||| |||||| ||| ||||||||||| Sbjct 2130 ATTCTTTGAGAGATATCAACAAGATTTATTACAAAACTATCAAATTATTAAAGCGAATGA 2071 Query 37643 A-TTGGTCACTGAGTTCAAACAACAACCTACGAATCAAAACTTTAACAACTTGATTGATG 37701 | || | | | | || |||||| | |||| | ||| ||||| | || |||| Sbjct 2070 ACTTACTGA-TAATTTTAAACAATTATCTACACCTGAAACTTTTAATGAAATGGTTGAGA 2012 Query 37702 AACTCAAGGATTTAAAAACAATTACTAACAAAAAAGAAGATGGAAC-CAAGAAGTTTGTT 37760 |||| || || |||| | || || | ||||||||| ||||| || ||| | | || | Sbjct 2011 AACTTAAAGAGTTAACTAATATCACAACCAAAAAAGAGGATGGCACTCAACGA-TATGCT 1953 Query 37761 GANNNNNNNNNNNNNNNNNNATACAGCGATAGCCCTAAGAAGCAAATTAAGACGGGTTAC 37820 | ||| || ||| ||| | | | | || || || Sbjct 1952 AAACAATTAGTTGAGGATTTATATAGTGATGAACCTGTGCAAAGAGTAAAAACCAAATAT 1893 Query 37821 AAGCTAATGGATTACAAAATAGGGGGATTGGAGCCATCACAATTAATCGTCATCGCAGCG 37880 || || ||||| || ||||| || || || |||||| ||||| || || || || || Sbjct 1892 AAACTCATGGACTATAAAATCGGTGGTTTTGAGCCAAGTCAATTGATAGTAATTGCTGCT 1833 Query 37881 CGTCCCTCAGTGGGTAAGACAGGTTTTGCATTAAACATGATGCTGAACATAGCACAAAAT 37940 ||||| || |||||||| || ||||||||||| |||||| |||||| ||| || | Sbjct 1832 CGTCCAAGTGTCGGTAAGACTGGATTTGCATTAAATATGATGTGGAACATTGCAAAACAA 1773 Query 37941 GGATATAAAACATCTTTCTTTAGTCTCGAAACAACTGGCACATCAGTATTGAAACGTATG 38000 || | ||||||| ||||||||| | ||||||||||| | | | || || | || Sbjct 1772 GGCCACCAAACATCATTCTTTAGTATTGAAACAACTGGAAAAAACATCTTACAAAGATTG 1713 Query 38001 TTATCAACAATTACTGGTATTGAGTTAACCAAGATAAAAGAAAT-CAGGAACTTAACGCC 38059 |||| || || |||||||| ||||||| | || ||| | | || || || | |||| Sbjct 1712 CTATCTACTATCACTGGTATCGAGTTAAACCGTATTAAAAATGTTCAAGACCTGA-CGCC 1654 Query 38060 GGATGACTTAACAAAGTTAACGAATGCGATGGATAAAATCATGAAATTAGGTATTGATAT 38119 |||| ||||| | ||||| ||| || ||| |||| | ||||||||||| | || Sbjct 1653 AAATGAATTAACTGATTTAACAGGTGCTATAGATCAAATACTTAAATTAGGTATAAACAT 1594 Query 38120 TTCTGATAAAAGTAATATCACACCGCAAGATGTGCGAGCACAAGCAATGAGGCATTCAGA 38179 | ||| | || | | ||||| ||||| | |||||||||| |||| |||| || Sbjct 1593 TAATGACGATAGCACAACAACACCACAAGACATTAGAGCACAAGCGATGAAGCATAGTGA 1534 Query 38180 CGGTCAACAAGTTATTTTTATTGATTACCTTCAACTGATGGATACTGATGCGAAAGTTGA 38239 | | ||||||||| |||||||||||||||||| | ||||| || ||| | || ||||| Sbjct 1533 CAAACCACAAGTTATATTTATTGATTACCTTCAATTAATGGAAACAGATACTAATGTTGA 1474 Query 38240 TAGACGTGTAGCAGTAGAAAAGATATCACGCGACTTAAAGATAATTGCTAATGAGACAGG 38299 |||||| || ||||| |||||||||||||||||||| || || || || ||||| ||||| Sbjct 1473 TAGACGCGTTGCAGTTGAAAAGATATCACGCGACTTGAAAATCATAGCAAATGAAACAGG 1414 Query 38300 CGCAATCATCGTACTACTTTCACAACTGAATCGTGGTGTCGAGTCTAGACAGGATAAAAG 38359 ||||| || ||| | ||||| ||| |||||||||| || || || ||| | |||||| | Sbjct 1413 AGCAATTATAGTAGTTCTTTCTCAATTGAATCGTGGAGTTGAATCAAGAAACGATAAACG 1354 Query 38360 ACCAATGCTATCAGACATGAAAGAATCAGGCGGAATAGAAGCAGATGCGAGTTTAGCAAT 38419 || ||| |||||||||||||||| ||||| ||||| |||||||| || ||| | || || Sbjct 1353 TCCGATGTTATCAGACATGAAAGAGTCAGGTGGAATTGAAGCAGACGCAAGTATGGCGAT 1294 Query 38420 GCTACTTTACCGTGATGATTACTATAACCGTGACGAAGATGACGGTATTACAGGCAAATC 38479 | | | || | ||||||||||| | | || |||| || | || | || ||||| Sbjct 1293 GATGTTGTATAGAGATGATTACTACGAACAAGATGAAGCAGA-TGAAT--CTGGTAAATC 1237 Query 38480 TATTGTTGAATGTAACATAGCCAAAAACAAAGACGGAGAAACTGGAATAATTGAATTTGA 38539 ||| ||||||||||| |||||||| |||||||| || |||||||| | ||||||||||| Sbjct 1236 TATCGTTGAATGTAATATAGCCAAGAACAAAGATGGTGAAACTGGTGTTATTGAATTTGA 1177 Query 38540 GTATTACAAGAAGACGCAGAGGTTTTTCACATGA 38573 | ||||||||| || |||||||||||||||||| Sbjct 1176 ATTTTACAAGAAAACACAGAGGTTTTTCACATGA 1143 Score = 363 bits (402), Expect = 4e-96 Identities = 573/813 (70%), Gaps = 16/813 (2%) Strand=Plus/Minus Query 34359 GATATTAGTTACTCCACAAATAGAAATAGAGCTAGGGAGTTTAACGGTATGGAAGAAGCA 34418 || ||||| ||||| || | | |||||| || |||||||||||| | || |||| Sbjct 5266 GAAATTAGCTACTCAACGCAGTTTAGTAGAGCAAGAGAGTTTAACGGTTTAGATGAAGTG 5207 Query 34419 AGCATCAATATGGATTATCACAAAGCGATTAAGAAAACAGTGACAGAAACAATTGAGTAC 34478 | || ||||| ||||||| |||||||| | ||| | |||| | | | || Sbjct 5206 ACAATTGATATGTCATATCACATGGCGATTAAACATACACATATAGAAGAAGATAAATAT 5147 Query 34479 GAGGAGGTAGAACATGACTGAACAAACATTATTTGAACAGTTGAACAGTAAAAATGTGAA 34538 |||||| |||| |||| |||| ||||||||||||||||||| |||| | || || Sbjct 5146 GAGGAGTTAGATTATGAGTGAAAAAACATTATTTGAACAGTTAAACACAATTAACGTATC 5087 Query 34539 CGATCATACAGAACaaaaaaaTGGAT-TAACTTATCTAGCGTGGTCATATGCACATCAAG 34597 |||||| ||| | || ||||| | ||||| || |||| ||| || |||||||| || Sbjct 5086 TGATCATGTTGAAAAGAAGAATGGCTATAACT-ATTTAGCTTGGACACATGCACATGAAC 5028 Query 34598 AGTTAAAAAAGATTGACCCTAACTACACAGTAAAAGTACACGAGTTTCCACATCCAGATA 34657 | | ||||| ||||||| ||||| | |||| |||| ||||||||||| || |||| Sbjct 5027 AACTTAAAAATGTTGACCCCAACTATGAAATAAAGATACATGAGTTTCCACACCCGGATA 4968 Query 34658 TTAACACAGAA--AATTATTTTGTACCTTATTTAGCTACACCAGAGGGCTATTTTGTACA 34715 | | || | | || ||||| ||||||||| |||| || ||||| || ||||||||| | Sbjct 4967 T-AGCAAATGACCAAGTATTT-GTACCTTATCTAGCAACTCCAGAAGGTTATTTTGTAAA 4910 Query 34716 GGTATCTGTGACTGTGAAAGATAGTACAGAGACTGAGTGGCTCCCAGTATTGGACTTTAG 34775 ||||| | | | |||| || ||| || | || ||| | |||||||| ||||||| Sbjct 4909 AGTATCAATCATATTAAAAGGTATTACCGAATCAGAATGGTTACCAGTATTAGACTTTAA 4850 Query 34776 AAATAAATCACTTGCTAAAGGTAGTGCAACAACTTTTGATATCAACAAAGCGCAAAAACG 34835 ||| || || | || ||||| ||||| || || |||||||| ||||| |||||||| Sbjct 4849 AAACAAGTCGTTAGCGAAAGGGCAAGCAACTACATTCGATATCAATAAAGCTCAAAAACG 4790 Query 34836 ATGTTTCGTTAAAGCTTCGGCTTTACACGGTTTAGGCTTATATATTTACAACGGCGAGGA 34895 || || |||||||| | || |||||||| ||||| |||| || |||||| | || || Sbjct 4789 TTGCTTTGTTAAAGCAGCAGCATTACACGGCTTAGGTCTATACATCTACAACCGTGAAGA 4730 Query 34896 ACTGCCAAGTGCAAGTGACAACGATATTACAGAATTAGAAGAGCGTATCAATCAGTTTGT 34955 | | || | ||| ||| | ||| ||| ||||||| || | | ||||| Sbjct 4729 ATTACCGAATGCTAGTAGTGAAGATGCACAAGAGCTAGAAGATAAGATAGCTGAATTTGT 4670 Query 34956 GAACTTATCTCAAGAAAAAGGGCGAGATGCAACTATCGACAAAACGATGAGATGGCTAAA 35015 | | || ||||||||||| |||||||||| | || ||||| ||| | ||| || Sbjct 4669 ACGCATTTCACAAGAAAAAGGCAGAGATGCAACATTGGAAAAAACAATGCGTTGGTTAGG 4610 Query 35016 AATATCTAACATTAATAAATTAAGTCAAAAACAAATCGCAGAAGCACACCAAAAATTAGA 35075 || || |||||||| |||||| ||| | ||| |||| || |||| |||| Sbjct 4609 CATTGAAAATATTAATAAGTTAAGTGGCAAAGGCTTGGCAACAGCAAACGCAAAACTAGA 4550 Query 35076 TGCGGGATTAAAACAATTGGATAGTGAGGAGAAACAATAATG--TTAAACAGAGTAGTTT 35133 ||| |||||||||||||| || | ||||||| ||||||| || ||| | | | Sbjct 4549 TGCAGGATTAAAACAATTAGACA---AGGAGAATGAATAATGAATTTAAC-----AATCT 4498 Query 35134 TAGTAGGACGATTAACAAAAGACCCAGAATTAA 35166 || |||||| | ||||||||| |||| ||| Sbjct 4497 TAACGGGACGAATCACAAAAGACTTAGAACTAA 4465 Score = 257 bits (284), Expect = 5e-64 Identities = 327/444 (74%), Gaps = 22/444 (5%) Strand=Plus/Minus Query 38995 ATATTTGATAT-TTAGAGG--TGGCGCAAT-GAGTAAATACAATGCTAAGAAAGTTGAGT 39050 ||||||||| | ||| ||| ||||||| | ||||||||||||||| ||||||||||||| Sbjct 778 ATATTTGATTTCTTATAGGAGTGGCGCACTTGAGTAAATACAATGCAAAGAAAGTTGAGT 719 Query 39051 ACAAAGGAATTGTATTTGATAGCAAAGTAGAGTGTGAATATTACCAATATTTAGAA---- 39106 | ||||| || || ||||||||||| || ||||| || ||| | || |||||| Sbjct 718 ATAAAGGTATAACGTTCGATAGCAAAGTTGAATGTGATTACTACAAGTACTTAGAACAAC 659 Query 39107 -AGTAAT-ATGAATGGCACTAATTATGATCATATCGAAATACAACCGAAATTCGAATTAT 39164 | |||| || |||| |||||| ||||||| |||||||||| || || || Sbjct 658 GATTAATTATAGATGG------TTATGACTATATCGAGATACAACCGAGATATGAGCTAA 605 Query 39165 TACCAAAACTAGATAAACAACGAAAGATTGAATATATTGCAGACTTCGCGTTAT---ATC 39221 |||| ||| | | ||||||||| || | |||||||||||||||||| || ||| || Sbjct 604 TACCTAAATTTGGTAAACAACGTAAAACTGAATATATTGCAGACTTTGCACTATGGAATA 545 Query 39222 TCGATGGCAAACTGATTGAAGTTATCGACATTAAAGGCATGCCAACCGAAGTAGCGAAAC 39281 ||| ||| |||||||||| || ||| ||||||||||| | || ||| || || Sbjct 544 ACGA---CAAGTTGATTGAAGTCATAGACGTTAAAGGCATGGCGACAGAAACGGCTAAGT 488 Query 39282 TTAAAGCTAAGATTTTCAGACACAAATACAGAAACATAAAACTCAATTGGATATGTAAAG 39341 | || || ||| | || ||| | ||| || ||||||| | |||||||||||||| Sbjct 487 TAAAGGCGAAGTTATTTAGATATCTATATCCCAATGTAAAACTTACTTGGATATGTAAAG 428 Query 39342 CGCCTAAGTATACAGGTAAAACATGGATTACGTACGAGGAATTAATTAAAGTAAGACGAG 39401 | |||||||| ||||||||| ||| | ||||| || ||||| | || || ||||| | Sbjct 427 CACCTAAGTACACAGGTAAAGACTGGGTAACGTATGAAGAATTGAACAAGGTGAGACGCG 368 Query 39402 AACGCAAAAGAGAAATGAAGTGAT 39425 ||||||| | || | || ||||| Sbjct 367 AACGCAAGAAAGCTAAGAGGTGAT 344 Score = 251 bits (278), Expect = 2e-62 Identities = 210/256 (82%), Gaps = 1/256 (0%) Strand=Plus/Minus Query 30636 CCATAATATTTTCTGGTTTTATATTCAAACCTTTACAAATTTTTATAATATTTTCTACTT 30695 |||| |||| ||| ||||| |||| ||||||||||||||||| || | |||||||||| Sbjct 7587 CCATTATATCTTCGGGTTTAATATCTAAACCTTTACAAATTTTGATGACGTTTTCTACTT 7528 Query 30696 TGGCATTAAATACACCTCGCTCCAAAATTGAACGAACTGTTGTATAAGCTAACCCTATAT 30755 | || ||||||| |||| || ||||| || | |||||||||||||||||| || | | Sbjct 7527 TAGCGTTAAATATTCCTCTTTCTAAAATAGATCTAACTGTTGTATAAGCTAAACCAACTT 7468 Query 30756 CTTCTGAAAAAGCTTTTACTGAACCGGATTTCATTTCCATTAAATGTTTTAAATGCTTTT 30815 ||||||||||||| || || ||| ||||| |||||||||| | ||||||||| |||| Sbjct 7467 CTTCTGAAAAAGCCTTCACACTACCTGATTTTATTTCCATTAGACGTTTTAAATCTTTTT 7408 Query 30816 CTTTATCCAT-TTTGGTTACCTCATTTCTAAAATATACTTATATAATAACATGCGAAAAA 30874 ||||| ||| || | ||||||||||||||| | ||| ||||||||| ||||||||||| Sbjct 7407 CTTTAGTCATATTCGTTTACCTCATTTCTAATTTGTACCTATATAATATCATGCGAAAAA 7348 Query 30875 TCGTATATCAAGATAA 30890 |||||||||||| ||| Sbjct 7347 TCGTATATCAAGTTAA 7332 Score = 237 bits (262), Expect = 4e-58 Identities = 472/695 (68%), Gaps = 7/695 (1%) Strand=Plus/Minus Query 35520 GACTTACCGTTCTGATTGGAATGATTAAATGCCAAAAATTACTAGTTATATCACTCAAGA 35579 || |||||||||| | || |||||| ||| | ||| | | || ||| ||| | Sbjct 4120 GATTTACCGTTCTAA--GGTGTGATTATATGGCGGTAATAAAAAACTACATCCAACAAAA 4063 Query 35580 CGACGGCACAACAACAGTTGTCATCTCGGGTGTCGAATTAGGCAATAAAGAAACATTACT 35639 || ||||||| ||| | ||||| |||||| | | || ||||| ||||| Sbjct 4062 TGATGGCACAATAACTGCCGTCATTGAGGGTGTAACACTTACTAACAAAGACTTTTTACT 4003 Query 35640 ACTTGATAACGGTTTTGATGTAGAAGTCGATGTAAGCGTCATAGATCCGTTTCGAATTAC 35699 |||||||||||| || || || ||| | ||||| ||| | || || | ||| || Sbjct 4002 ACTTGATAACGGATTAGAAGTTGAATGCAATGTAGCAGTCGTTGACCCATACAAAATAAC 3943 Query 35700 CGGCAAGCAACGACGAAAAATATTCGCGCTTGTCAAAGACATAGAAGAACATACAGGTCA 35759 | |||||||| ||||| ||||||| ||||| || || ||||||| |||||||| Sbjct 3942 TGATAAGCAACGTAGAAAAGTATTCGCTCTTGTGAACGATATAGAAGCTCATACAGGCAC 3883 Query 35760 ACCAATGGACTATATGCGGCATATGTTCATCGAGTATGTAAG-GACTTACTACGGCTATG 35818 ||| || |||||| || || | ||| || |||||| | | || |||||||| | Sbjct 3882 GCCACAAGATTATATGAGGAATGTATTCCAAGAATATGTACGTGTGCTA-TACGGCTACG 3824 Query 35819 ATGAACGTATTTCGCTAAGTAATTGTACGAGAACACAAGCGAGTCAAATCATTGAAGCAA 35878 |||| || || || || | ||||| | || | | || |||||||| || || | | Sbjct 3823 ATGAGCGCATATCACTTGCTGATTGTTCTAGGAAAGTGGCAAGTCAAATTATAGATGTAG 3764 Query 35879 CGCTTGACTGGACTTTCCATAACGACATACCGCTTAGCTACAAAACAAGCGATTTAATGA 35938 | |||| |||| ||| | ||| |||| ||||| || || |||||||| ||| |||| | Sbjct 3763 CAATTGAATGGATATTCGAGAACAACATCCCGCTCAGATATAAAACAAGTGATCTAATCA 3704 Query 35939 AACAAGATAAATCGTTCTTATACTGGTCAACTGTTAACCGCAACTGTGTAATATGCGGAA 35998 | | || | | |||| |||||| | | ||| | || | || || || || || || | Sbjct 3703 AGAATGACAGAACGTTTTTATACATGGCTACTATCAAGAGAAAGTGCGTTATCTGTGGCA 3644 Query 35999 AGCCTCACGCTGACCTAGCACATTACGAAGCAGTAGGTAGAGGCATGAACAGAAATAAGA 36058 || || || || ||||||||||| ||||||||||| | || |||||| |||| Sbjct 3643 AG---CATGCAGAGCTAGCACATTATCAAGCAGTAGGTCGTGGACGCAACAGACGCAAGA 3587 Query 36059 TGAATCACTATGACAAACATGTATTAGCGTTATGTCGCGAACATCATAACCAGCAACATG 36118 | | || | | |||| | ||||||| ||||| | |||||||| ||||||| | Sbjct 3586 TAGAACATTTTAACAACAAAGTATTAGGACTATGTTCCTTTCATCATAAAGAGCAACACG 3527 Query 36119 CGATTGGCGTTAAGTCATTTGATGATAAATATCAATTGCATGACTCGTGGATAAAAGTTG 36178 || ||| | | || || | || ||||| || | | || ||| | | |||| Sbjct 3526 ACATGGGCATGGATAGTTTCAATAAGAAGTATCATTTAGAAAATTCATGGGTGGACGTTG 3467 Query 36179 ATGAGAGGCTCAATAAAATGCTGAAAGGAGAGAAA 36213 | ||||| || || |||||||||||||||| |||| Sbjct 3466 ACGAGAGACTAAACAAAATGCTGAAAGGAGTGAAA 3432 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138879425211796