Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterocephalus_20glaber_20[refseq_20GCF_5F000247695.1_202012-02-17] 4,229 sequences; 2,618,204,639 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq16 89.7 4e-13 >seq16 Length=31725842 Score = 89.7 bits (98), Expect = 4e-13 Identities = 155/223 (70%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 ||| ||||| | ||||||||||| | || || || | || || |||| || || | Sbjct 21647255 CAAGATGCAGATTTTTGTAAAAACTCTTACGGGGAAGACCATCACGCTCGAGGTTGAACC 21647196 Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 | ||||| || || | || ||| ||||| || || ||||| || ||||| || Sbjct 21647195 CTCAGACACTATAGAAAATGTAAAAGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGA 21647136 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATT 24165 ||| || || ||||| | | || |||||||| ||||||| || || | | |||| Sbjct 21647135 TCAGCAAAGGCTGATCTTTGCTGGTAAGCAACTGGAAGATG-GAGGTACTTTGTCTGATT 21647077 Query 24166 ATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATT 24208 | ||||||||||| || || || ||||| | ||||| ||||| Sbjct 21647076 ACAACATTCAAAAGGAGTCCACCCTTCATCTTGTGTTGAGATT 21647034 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429913840695495