Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterocephalus_20glaber_20[refseq_20GCF_5F000247695.1_202012-02-17] 4,229 sequences; 2,618,204,639 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq16 109 5e-19 seq148 95.1 1e-14 >seq16 Length=31725842 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342 || ||||| |||||||| ||||| || ||||| || ||||| || |||| || || Sbjct 21647254 AAGATGCAGATTTTTGTAAAAACTCTTACGGGGAAGACCATCACGCTCGAGGTTGAACCC 21647195 Query 115343 AGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402 |||||| | | | | |||||| || || ||||| ||||| | || |||| Sbjct 21647194 TCAGACACTATAGAAAATGTAAAAGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 21647135 Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462 |||||||| || || | ||| || || ||| | ||||||| || || | ||||| Sbjct 21647134 CAGCAAAGGCTGATCTTTGCTGGTAAGCAACTGGAAGATGGAGGTACTTTGTCTGATTAC 21647075 Query 115463 AACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||||||||| ||||| || | ||| | ||||||||||| || || || Sbjct 21647074 AACATTCAAAAGGAGTCCACCCTTCATCTTGTGTTGAGATTCCGTGGTGG 21647025 >seq148 Length=4887613 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342 |||||||||||||| || || || || || || || ||||| ||| | ||| ||| || Sbjct 4051003 AAAATGCAAATTTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTAGAAGTGGAACCC 4050944 Query 115343 AGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402 || || || ||| | || || || || |||||||||||| |||| ||| Sbjct 4050943 AGTGATACCATTGAGAATGTGAAGGCCAAGATCCAGGATAAAGAAGGCATCCCTCCTGAC 4050884 Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462 ||||| || || || | ||| |||||||| | ||||||| | || | | || || Sbjct 4050883 CAGCAGAGGCTCATCTTTGCAGGCAAACAGCTTGAAGATGGCCGCACTCTTTCTGACTAC 4050824 Query 115463 AACATTCAAAAAGAGTCTACTATACATATGGT 115494 ||||| || |||||||||||| | || |||| Sbjct 4050823 AACATCCAGAAAGAGTCTACTCTGCACCTGGT 4050792 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425322077371480