Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterocephalus_20glaber_20[refseq_20GCF_5F000247695.1_202012-02-17] 4,229 sequences; 2,618,204,639 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq148 82.4 6e-11 >seq148 Length=4887613 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 111184 AAAATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCC 111243 |||||||||||||| || || || |||| ||||| ||||| ||| | ||| ||||||| Sbjct 4051003 AAAATGCAAATTTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTAGAAGTGGAACCC 4050944 Query 111244 AGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGAT 111303 || ||| | ||| | || || || || || ||||||||| | || || Sbjct 4050943 AGTGATACCATTGAGAATGTGAAGGCCAAGATCCAGGATAAAGAAGGCATCCCTCCTGAC 4050884 Query 111304 CAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 111363 || || ||||| || | ||| |||||||| | |||||| ||| | | || || Sbjct 4050883 CAGCAGAGGCTCATCTTTGCAGGCAAACAGCTTGAAGATGGCCGCACTCTTTCTGACTAC 4050824 Query 111364 AATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || || || ||||| ||||| || || | || | || ||| | ||||| Sbjct 4050823 AACATCCAGAAAGAGTCTACTCTGCACCTGGTCCTTCGCCTGAGAGGTGG 4050774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423018196121800