Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterocephalus_20glaber_20[refseq_20GCF_5F000247695.1_202012-02-17] 4,229 sequences; 2,618,204,639 total letters Query= NC_008722.1 Length=43420 Score E Sequences producing significant alignments: (Bits) Value seq371 886 0.0 >seq371 Length=40469 Score = 886 bits (982), Expect = 0.0 Identities = 1311/1838 (71%), Gaps = 52/1838 (3%) Strand=Plus/Minus Query 32631 GTAGAGCAAGAGAATTTGCAGGACTAGAAGATGTGAGTATCGACATGACAAAGCATACAG 32690 ||||||||||||| ||| || |||| || |||| || || ||| || | || | | Sbjct 5241 GTAGAGCAAGAGAGTTTAACGGTTTAGATGAAGTGACAATTGATATGTCATATCACATGG 5182 Query 32691 CAATTAAAAAGACAGTAACAGAATCAACTGAGTATGAGGAGGTTAAGTATGACTGAGGAA 32750 | |||||| | ||| | |||| | | | ||||||||| | | ||||| ||| || Sbjct 5181 CGATTAAACATACACATATAGAAGAAGATAAATATGAGGAGTTAGATTATGAGTGAAAAA 5122 Query 32751 ACACTATTTAATCAATTAAATCAGAAAGAT-GTAAACGACCATGTAGAAAAGAAAAATGG 32809 ||| ||||| | || ||||| || || | ||| || ||||| |||||||| ||||| Sbjct 5121 ACATTATTTGAACAGTTAAA-CACAATTAACGTATCTGATCATGTTGAAAAGAAGAATGG 5063 Query 32810 ATTAACCTACCTAGCATGGTCATACGCTCATCAAGAATTAAAGAAGATAGACAGTAACTA 32869 | | ||| |||| ||| || | || ||| || || | || || | ||| ||||| Sbjct 5062 CTATAACTATTTAGCTTGGACACATGCACATGAACAACTTAAAAATGTTGACCCCAACTA 5003 Query 32870 CAGTATTAAGACACATGAATTTGTACACCCTGACGTACCACAAGAC-AACTATTTTGTAC 32928 || |||| |||||| ||| |||||| || || || | ||| || ||||| |||| Sbjct 5002 TGAAATAAAGATACATGAGTTTCCACACCCGGATATAGCAAATGACCAAGTATTT-GTAC 4944 Query 32929 CTTATTTAGCTACTCCTGAGGGCTATTTTGTACAAGTGTCAGTAACTGTGAAAGGACAAA 32988 ||||| |||| ||||| || || ||||||||| |||| ||| | | | ||||| | Sbjct 4943 CTTATCTAGCAACTCCAGAAGGTTATTTTGTAAAAGTATCAATCATATTAAAAGGTATTA 4884 Query 32989 CAGAAACAGAGTGGCTTCCAGTATTGGATTTTAGAAACAAATCTTTAGC-AAAGGGTAGC 33047 | ||| |||| ||| | |||||||| || |||| |||||| || ||||| |||||| | Sbjct 4883 CCGAATCAGAATGGTTACCAGTATTAGACTTTAAAAACAAGTCGTTAGCGAAAGGGCAA- 4825 Query 33048 GCGACAACATTCGATATTAATAAAGCTCAAAAACGTTGTTTTGTTAAAGCTGCAGCATTA 33107 || || ||||||||||| |||||||||||||||||||| ||||||||||| ||||||||| Sbjct 4824 GCAACTACATTCGATATCAATAAAGCTCAAAAACGTTGCTTTGTTAAAGCAGCAGCATTA 4765 Query 33108 CATGGTCTAGGACTTTATATATATAACGGGGAAGAAGTTCCGAGCGCTAATGATAATGAC 33167 || || |||| || || || || ||| | |||||| | |||| |||| | | | || Sbjct 4764 CACGGCTTAGGTCTATACATCTACAACCGTGAAGAATTACCGAATGCTAGTAGTGAAGAT 4705 Query 33168 ATAACAGAATTAGAAGAACGTATTAACCAATTTGT-CACTTTATCTCAAGAAAAAGGCAG 33226 | ||| ||||||| || ||||||| | | || || |||||||||||||| Sbjct 4704 GCACAAGAGCTAGAAGATAAGATAGCTGAATTTGTACGCATT-TCACAAGAAAAAGGCAG 4646 Query 33227 AGATGCAACACTAGACAAAACAATGCGTTGGTTAGGTATTCAAAACATTAACAAAGTTAC 33286 |||||||||| | || |||||||||||||||||||| ||| |||| ||||| || | | Sbjct 4645 AGATGCAACATTGGAAAAAACAATGCGTTGGTTAGGCATTGAAAATATTAATAAGTTAAG 4586 Query 33287 TAAAAAAGATATAGCAAATGCACATCAAAAACTAGATGCAGGACTAAAACAATTAGATAA 33346 | |||| | |||| ||| | |||||||||||||||| ||||||||||||| || Sbjct 4585 TGGCAAAGGCTTGGCAACAGCAAACGCAAAACTAGATGCAGGATTAAAACAATTAGACAA 4526 Query 33347 GGAGAATTCGAATGACTAATTTAACTATTTTAACAGGACGTATCACTAAAGATTTAGAAC 33406 ||||||| |||| | |||||||| || ||||| ||||| ||||| ||||| ||||||| Sbjct 4525 GGAGAAT--GAATAATGAATTTAACAATCTTAACGGGACGAATCACAAAAGACTTAGAAC 4468 Query 33407 TTAAACAAGCAGGACAAACACAAGTAACTAACTTTTCTATGGCAGTAGACAATCCATTCA 33466 | ||| | ||||| ||||||||||||| |||||||| | || ||||| || ||||| | Sbjct 4467 TAAAAGATGCAGGTAAAACACAAGTAACAAACTTTTCATTAGCGGTAGATAACCCATTTA 4408 Query 33467 AAAAAGATGACACATCATTCTTCGACATCGTAGCGTTCGGTAAAACTGCACAACTATTAA 33526 ||||||||||| |||||||||||| || ||||| || |||||||| ||| ||||||||| Sbjct 4407 AAAAAGATGACGTATCATTCTTCGATATTGTAGCTTTTGGTAAAACAGCAGAACTATTAA 4348 Query 33527 ACGACTATTGCGGTAAGGGAAGCAAAGTTTTAATCGAAGGCAACTTGAAGCAAGACCGTT 33586 | ||||||||||||| || |||||| || || || ||||| || || ||||| |||| Sbjct 4347 ATAACTATTGCGGTAAAGGTAGCAAAATTGGCATTGAGGGCAATTTAAAACAAGATCGTT 4288 Query 33587 TCCAAGATAAAGAAGGTAACAATCGTTCAGTAGTACGAGTGATTGCAAATAGAATTGAAT 33646 || | ||||||||||||||||| |||||||| || |||| || || ||| | |||||| Sbjct 4287 TCGAGGATAAAGAAGGTAACAAACGTTCAGTTGTTAGAGTAATCGCGAATCGTGTTGAAT 4228 Query 33647 TCTTAGATAGCAAAGGTAGTAATCAATCTAACAACCAATCCCCAAAACGAGGGCAAGC-- 33704 | ||||||| |||| | |||||| ||| || ||| || ||| | Sbjct 4227 TTTTAGATACAAAAG------AACAATCT--CAA--------CAGAAC--GGACAAACTA 4186 Query 33705 ACCAGCAGGC----AATAATCCGTT------TGCTAACGG------CACAGATATAGAAA 33748 | ||||| || | ||||| || ||||||||| | ||||| || Sbjct 4185 AACAGCAAGCGTCTGAGAATCCTTTTAATAATGCTAACGGTGGACCAATTGATATTCAAG 4126 Query 33749 ATTCAGAATTACCGTTCTGATTGGACTGATTAGATGGTAGTAATAAAAAACTACATTACA 33808 || || |||||||||| | || |||||| |||| ||||||||||||||||| | Sbjct 4125 ATGACGATTTACCGTTCTAA--GGTGTGATTATATGGCGGTAATAAAAAACTACATCCAA 4068 Query 33809 GAAGATGACGGTACAACGACTGTAGTCATCAAAGGAGTAGAACTAGATAACAAAACATCT 33868 || |||| || |||| |||| ||||| | || ||| ||| ||||||| | | Sbjct 4067 CAAAATGATGGCACAATAACTGCCGTCATTGAGGGTGTAACACTTACTAACAAAGACTTT 4008 Query 33869 TTACTTTTAGACAACGGTTACGAAGTAGAA-GCAGATGTAAGAGTTGTAGATCCATTCAA 33927 ||||| | || ||||| | ||||| ||| ||| ||||| ||| || || |||| ||| Sbjct 4007 TTACTACTTGATAACGGATTAGAAGTTGAATGCA-ATGTAGCAGTCGTTGACCCATACAA 3949 Query 33928 GATTACAGATAAGCAGCGTAGAAAAGTATTTGCTCTCTGT-AACGACATAGAAGCTTACA 33986 || || |||||||| |||||||||||||| ||||| ||| ||||| ||||||||| | | Sbjct 3948 AATAACTGATAAGCAACGTAGAAAAGTATTCGCTCT-TGTGAACGATATAGAAGCTCATA 3890 Query 33987 CAGGACAACCTCGTGACTATATGAGGTATATGTTCATGGATTACGTAGAAGTCCTATACG 34046 |||| || | || ||||||||| || | ||| || || ||| || ||||||| Sbjct 3889 CAGGCACGCCACAAGATTATATGAGGAATGTATTCCAAGAATATGTACGTGTGCTATACG 3830 Query 34047 GCTACGAAAAACGCCTCTCTTTGAGTGATTGTACTAGAGAACAAGCGAGTCAAGTTATAG 34106 ||||||| | ||| | || | ||||||| |||| || || |||||| |||||| Sbjct 3829 GCTACGATGAGCGCATATCACTTGCTGATTGTTCTAGGAAAGTGGCAAGTCAAATTATAG 3770 Query 34107 AAGTCATTATTGACTGGGTGTTTCATAACAATATCCCACTCAACTATAAGACAAGTGACT 34166 | || ||||| ||| | || | ||||| ||||| |||| ||||| |||||||| Sbjct 3769 ATGTAGCAATTGAATGGATATTCGAGAACAACATCCCGCTCAGATATAAAACAAGTGATC 3710 Query 34167 TACTTAAGAATGATAAGGCGTTTCTTTACTGGTCGACAGTCAATCGTAACTGTGTAATAT 34226 || | |||||||| | ||||| | ||| | | || |||| | || || || || | Sbjct 3709 TAATCAAGAATGACAGAACGTTTTTATACATGGCTACTATCAAGAGAAAGTGCGTTATCT 3650 Query 34227 GCGGTAAACATGGAGAACTGGCACATCATAAAGCGATTGGTAGAGGTGCTAATCGTAAGA 34286 | || || |||| ||| || |||||| || |||| | ||| | || || | | Sbjct 3649 GTGGCAAGCATGCAGAGCTAGCACATTATCAAGCAGTAGGTCGTGGACGCAACAGACGCA 3590 Query 34287 AAATGGATCATTACGGTTTTGAAGTGCTGTGTCTATGTAGAGAACATCATCAATCGCAGC 34346 | || || |||| |||| | | |||||| |||||| || ||| | Sbjct 3589 AGATAGAACATTTTAACAACAAAGTATTAGGACTATGTTCCTTTCATCATAAAGAGCAAC 3530 Query 34347 ATGATATGGGCGTAGAAACCTTTGATAAATTACATCACCTTGAAAATTCGTGGCTTTCAG 34406 | || |||||| | || | || |||| |||| | |||||||| ||| | | Sbjct 3529 ACGACATGGGCATGGATAGTTTCAATAAGAAGTATCATTTAGAAAATTCATGGGTGGACG 3470 Query 34407 TAGATGAGCGCTTAAACAAAATGTTGAAAGGAGTTAAA 34444 | || ||| | ||||||||||| |||||||||| ||| Sbjct 3469 TTGACGAGAGACTAAACAAAATGCTGAAAGGAGTGAAA 3432 Score = 311 bits (344), Expect = 2e-80 Identities = 296/376 (79%), Gaps = 7/376 (2%) Strand=Plus/Minus Query 37222 TTGAGTAAATACAATTCTAAAAAAGTTGAATATAAAGGTTTTGTGTTCGATAGCAAAATT 37281 ||||||||||||||| | || |||||||| ||||||||| | ||||||||||||| || Sbjct 749 TTGAGTAAATACAATGCAAAGAAAGTTGAGTATAAAGGTATAACGTTCGATAGCAAAGTT 690 Query 37282 GAATGCGACTATTACCAACATTTAGAACGTAAC--TTAGGTA---AGGGATATGATCATA 37336 ||||| || || ||| | | ||||||| ||| ||| || | || ||||| ||| Sbjct 689 GAATGTGATTACTACAAGTACTTAGAAC--AACGATTAATTATAGATGGTTATGACTATA 632 Query 37337 TCGAATTACAACCTAGATATGAGTTGATACCTAAGTTTGATAACCAACGTAAAACAGAAT 37396 |||| ||||||| ||||||||| | |||||||| |||| ||| ||||||||||| |||| Sbjct 631 TCGAGATACAACCGAGATATGAGCTAATACCTAAATTTGGTAAACAACGTAAAACTGAAT 572 Query 37397 ATATAGCCGACTTTGCATTATGGAAAAATAACAAGCTGCTAGAAGTGATAGACGTAAAAG 37456 |||| || ||||||||| ||||||| || ||||| || | ||||| |||||||| |||| Sbjct 571 ATATTGCAGACTTTGCACTATGGAATAACGACAAGTTGATTGAAGTCATAGACGTTAAAG 512 Query 37457 GTATGCCAACAGAAGTAGCGAAGTTGAAAGCGAAGATATTCAGATATCAAAACAGAGAAG 37516 | ||| | |||||| || ||||| || |||||| |||| ||||||| | | | | Sbjct 511 GCATGGCGACAGAAACGGCTAAGTTAAAGGCGAAGTTATTTAGATATCTATATCCCAATG 452 Query 37517 TACCACTCACGTGGATATGTAAAGCACCTAAATATACAGGTCAAGAGTGGATAACGTATG 37576 || ||| || |||||||||||||||||||| || |||||| |||| ||| ||||||||| Sbjct 451 TAAAACTTACTTGGATATGTAAAGCACCTAAGTACACAGGTAAAGACTGGGTAACGTATG 392 Query 37577 AAGAATTAATTAAGGT 37592 ||||||| | ||||| Sbjct 391 AAGAATTGAACAAGGT 376 Score = 159 bits (176), Expect = 1e-34 Identities = 334/492 (68%), Gaps = 17/492 (3%) Strand=Plus/Minus Query 36276 TGCTATAGATCAAAT---TAAAAAATGTAATTCTTTAAAGATTGAGGATCA-AGCTCAAA 36331 ||||||||||||||| |||| | ||| |||| ||| | || | ||| ||| Sbjct 1629 TGCTATAGATCAAATACTTAAATTAGGTA------TAAACATTAATGACGATAGCACAAC 1576 Query 36332 TGACACCACAAGACGTTAGAGAAGTCGCATCTCAAAAAACAGACAAACCTCACGTTATAT 36391 |||||||||||| |||||| | || | | | |||||||| || ||||||| Sbjct 1575 A-ACACCACAAGACATTAGAGCACAAGCGATGAAGCATAGTGACAAACCACAAGTTATAT 1517 Query 36392 TTATTGATTATCTTACACTCATGCAATCAGATGTTCCTCAACGTGATAGACGATTAGAAG 36451 |||||||||| ||| | | ||| || ||||| || | ||||||||| | | || Sbjct 1516 TTATTGATTACCTTCAATTAATGGAAACAGATA---CTAATGTTGATAGACGCGTTGCAG 1460 Query 36452 TTGAAAAAATTTCTCGTGATTTAAAAATTATAGCTAAAGAAACAGGTTGTATCATTATCG 36511 ||||||| || || || || || ||||| ||||| || |||||||| || || | | Sbjct 1459 TTGAAAAGATATCACGCGACTTGAAAATCATAGCAAATGAAACAGGAGCAATTATAGTAG 1400 Query 36512 CGCTATCTCAATTAAGTAGAGGTGTAGAAAGTCGTAGTGATAAACGTCCGATGATGTCAG 36571 || |||||||| | | | || || ||| | | ||||||||||||||| | |||| Sbjct 1399 TTCTTTCTCAATTGAATCGTGGAGTTGAATCAAGAAACGATAAACGTCCGATGTTATCAG 1340 Query 36572 ATTTAAGAGAAGCAGGAGGAATTGAGCAAGACGCGAATATGATTTTCTTCTTATACCGTG 36631 | | | ||| |||| |||||||| |||||| | |||| | | || || | | Sbjct 1339 ACATGAAAGAGTCAGGTGGAATTGAAGCAGACGCAAGTATGGCGATGATGTTGTATAGAG 1280 Query 36632 ACGATTATTACGACCAAGACCAACAAGACAACATTACAGGTAAGTCGGAAATTGAATTCA 36691 | ||||| ||||| ||||| || ||| | || | ||||| || |||||| | Sbjct 1279 ATGATTACTACGAACAAGATGAAGCAGATGA-AT--CTGGTAAATCTATCGTTGAATGTA 1223 Query 36692 TTATTTCTAAAAATAAAGACGGAGAAACAGGGGTGGCACACCTCGATTTCTACAAGAAAA 36751 ||| | || || ||||| || ||||| || || | | || || |||||||||| Sbjct 1222 ATATAGCCAAGAACAAAGATGGTGAAACTGGTGTTATTGAATTTGAATTTTACAAGAAAA 1163 Query 36752 CGCAGAGGTTTT 36763 | |||||||||| Sbjct 1162 CACAGAGGTTTT 1151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138815428425836