Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterocephalus_20glaber_20[refseq_20GCF_5F000247695.1_202012-02-17] 4,229 sequences; 2,618,204,639 total letters Query= NC_008723.1 Length=44041 Score E Sequences producing significant alignments: (Bits) Value seq371 919 0.0 >seq371 Length=40469 Score = 919 bits (1018), Expect = 0.0 Identities = 1318/1833 (72%), Gaps = 47/1833 (3%) Strand=Plus/Minus Query 34329 AGAGCAAGAGAATTTGCAGGACTAGAAGATATGAGTATCGACATGACTAAGCACAGAGCA 34388 ||||||||||| ||| || |||| || ||| || || ||| | | |||| || Sbjct 5239 AGAGCAAGAGAGTTTAACGGTTTAGATGAAGTGACAATTGATATGTCATATCACATGGCG 5180 Query 34389 ATTAAAAAGAAAGTAACTGAAACAACTGAATATGAGGAGGTTGAGTATGACTGAAGAAAC 34448 |||||| | | | | ||| | | ||||||||||| | || ||||| |||| |||| Sbjct 5179 ATTAAACATACACATATAGAAGAAGATAAATATGAGGAGTTAGATTATGAGTGAAAAAAC 5120 Query 34449 ATTATTTAATCAGTTAAATCAGAAAGAT-GTAAACGATCATGTAGAAAAGAAAAACGGAT 34507 ||||||| | |||||||| || || | ||| |||||||| |||||||| || || | Sbjct 5119 ATTATTTGAACAGTTAAA-CACAATTAACGTATCTGATCATGTTGAAAAGAAGAATGGCT 5061 Query 34508 TAACCTACCTAGCATGGTCATACGCTCATCAAGAATTAAAGAAGATAGACAGCAACTACA 34567 | ||| |||| ||| || | || ||| || || | || || | ||| |||||| Sbjct 5060 ATAACTATTTAGCTTGGACACATGCACATGAACAACTTAAAAATGTTGACCCCAACTATG 5001 Query 34568 GTATTAAAACACATGAATTTGTACACCCTGATGTACCACTAGAT-AACTATTTTGTACCT 34626 || || | |||||| ||| |||||| ||| || || || || ||||| |||||| Sbjct 5000 AAATAAAGATACATGAGTTTCCACACCCGGATATAGCAAATGACCAAGTATTT-GTACCT 4942 Query 34627 TATTTAGCTACTCCAGAGGGTTACTTCGTACAAGTGTCAGTAACTGTAAAAGGACAAACT 34686 ||| |||| |||||||| ||||| || ||| |||| ||| | | ||||||| || Sbjct 4941 TATCTAGCAACTCCAGAAGGTTATTTTGTAAAAGTATCAATCATATTAAAAGGTATTACC 4882 Query 34687 GAAACAGAATGGCTTCCAGTATTGGATTTTAGAAACAAATCTTTAGC-AAAGGGTAGCGC 34745 ||| |||||||| | |||||||| || |||| |||||| || ||||| |||||| | || Sbjct 4881 GAATCAGAATGGTTACCAGTATTAGACTTTAAAAACAAGTCGTTAGCGAAAGGGCAA-GC 4823 Query 34746 GACAACGTTCGATATTAATAAAGCTCAAAAACGTTGTTTCGTTAAAGCTGCAGCATTACA 34805 || || |||||||| |||||||||||||||||||| || |||||||| ||||||||||| Sbjct 4822 AACTACATTCGATATCAATAAAGCTCAAAAACGTTGCTTTGTTAAAGCAGCAGCATTACA 4763 Query 34806 TGGCCTAGGTCTTTATATATACAACGGGGAAGAAGTTCCAAGCGCTAAC---GACAATG- 34861 ||| ||||||| || || |||||| | |||||| | || | |||| || ||| Sbjct 4762 CGGCTTAGGTCTATACATCTACAACCGTGAAGAATTACCGAATGCTAGTAGTGAAGATGC 4703 Query 34862 ACATTACAGAATTAGAAGAGCGTATCAACCAGTTTGTA---ACTTCATCTCAAGAAAAAG 34918 ||| ||| ||||||| || | |||||| | |||| |||||||||| Sbjct 4702 ACA----AGAGCTAGAAGATAAGATAGCTGAATTTGTACGCATTTCA---CAAGAAAAAG 4650 Query 34919 GTAGAGACGCAACGCTAGACAAAACAATGCGTTGGTTAGGTATTCAAAACATTAACAAAG 34978 | ||||| ||||| | || |||||||||||||||||||| ||| |||| ||||| || Sbjct 4649 GCAGAGATGCAACATTGGAAAAAACAATGCGTTGGTTAGGCATTGAAAATATTAATAAGT 4590 Query 34979 TTACTAAAAAAGATATAGCAAATGCACATCAAAAACTAGATGCAGGACTAAAACAATTAG 35038 | | | |||| | |||| ||| | |||||||||||||||| |||||||||||| Sbjct 4589 TAAGTGGCAAAGGCTTGGCAACAGCAAACGCAAAACTAGATGCAGGATTAAAACAATTAG 4530 Query 35039 ATAAGGAGAATTCGAATGACTAATTTAACTATTTTAACAGGACGTATCACTAAAGATTTA 35098 | ||||||||| |||| | |||||||| || ||||| ||||| ||||| ||||| ||| Sbjct 4529 ACAAGGAGAAT--GAATAATGAATTTAACAATCTTAACGGGACGAATCACAAAAGACTTA 4472 Query 35099 GAACTTAAACAAGCAGGACAAACACAAGTAACTAACTTCTCTATGGCAGTGGACAATCCA 35158 ||||| ||| | ||||| ||||||||||||| ||||| || | || || || || ||| Sbjct 4471 GAACTAAAAGATGCAGGTAAAACACAAGTAACAAACTTTTCATTAGCGGTAGATAACCCA 4412 Query 35159 TTCAAAAAAGATGACACATCATTCTTTGACATCGTAGCGTTTGGCAAAACTGCACAACTA 35218 || |||||||||||| ||||||||| || || ||||| ||||| ||||| ||| ||||| Sbjct 4411 TTTAAAAAAGATGACGTATCATTCTTCGATATTGTAGCTTTTGGTAAAACAGCAGAACTA 4352 Query 35219 TTAAACGACTATTGCGGTAAGGGAAGCAAAGTTTTAATCGAGGGCAACTTGAAGCAAGAC 35278 ||||| ||||||||||||| || |||||| || || |||||||| || || ||||| Sbjct 4351 TTAAATAACTATTGCGGTAAAGGTAGCAAAATTGGCATTGAGGGCAATTTAAAACAAGAT 4292 Query 35279 CGTTTCCAAGATAAAGAAGGTAACAATCGTTCAGTAGTACGAGTGATTGCAAATAGAATT 35338 |||||| | ||||||||||||||||| |||||||| || |||| || || ||| | || Sbjct 4291 CGTTTCGAGGATAAAGAAGGTAACAAACGTTCAGTTGTTAGAGTAATCGCGAATCGTGTT 4232 Query 35339 GAATTCTTAGATAGCAAAGGTAACAACCAACCTCAAAAACAACAAGAACATACTACACAG 35398 ||||| ||||||| |||| | ||| ||| |||| | | ||| |||| |||| Sbjct 4231 GAATTTTTAGATACAAAAG------AACAATCTC---AACAGAACGGACAAACTAAACAG 4181 Query 35399 ACAAAAAGTAAAAATCCATTCGCAAATGC-AACG--GGCCCTATCGATATAACTGATGAA 35455 | | | ||||| || ||||| |||| || || || ||||| ||||| Sbjct 4180 CAAGCGTCTGAGAATCCTTTTAATAATGCTAACGGTGGACCAATTGATATTCAAGATGAC 4121 Query 35456 GATCTCCCGTTCTGATTGGACTGATTAGATGGTAGTAATTAAAAACTACATTACAGAAGA 35515 ||| | ||||||| | || |||||| |||| ||||| ||||||||||| | || | Sbjct 4120 GATTTACCGTTCTAA--GGTGTGATTATATGGCGGTAATAAAAAACTACATCCAACAAAA 4063 Query 35516 TGACGGTACAACTACTGTAGTCATCAAAGGAGTAGAACTAGATAACAAAACGTCTTTACT 35575 ||| || |||| |||| ||||| | || ||| ||| ||||||| | |||||| Sbjct 4062 TGATGGCACAATAACTGCCGTCATTGAGGGTGTAACACTTACTAACAAAGACTTTTTACT 4003 Query 35576 TTTAGACAATGGTTACGAAGTGGAA-GCAGATGTAAGAGTTGTAGATCCATTCAAGATTA 35634 | || || || | ||||| ||| ||| ||||| ||| || || |||| ||| || | Sbjct 4002 ACTTGATAACGGATTAGAAGTTGAATGCA-ATGTAGCAGTCGTTGACCCATACAAAATAA 3944 Query 35635 CAGATAAGCAGCGCAGAAAGATATTTGCGCTCTGT-AACGACATAGAAGCATATACAGGA 35693 | |||||||| || ||||| |||| || || ||| ||||| |||||||| ||||||| Sbjct 3943 CTGATAAGCAACGTAGAAAAGTATTCGCTCT-TGTGAACGATATAGAAGCTCATACAGGC 3885 Query 35694 CAACCCCGTGACTATATGAGGTATTTGTTCATGGATTACGTAGAAGTCCTCTACGGCTAT 35753 || | || ||||||||| || | ||| || || ||| || || |||||||| Sbjct 3884 ACGCCACAAGATTATATGAGGAATGTATTCCAAGAATATGTACGTGTGCTATACGGCTAC 3825 Query 35754 GAAAAACGCCTCTCATTGAGCGACTGCACAAGAGAACAAGCTAAACAAATTATAGAAGTT 35813 || | ||| | ||| | || || | || || || | ||||||||||| || Sbjct 3824 GATGAGCGCATATCACTTGCTGATTGTTCTAGGAAAGTGGCAAGTCAAATTATAGATGTA 3765 Query 35814 ATTCTCGACTGGGTGTTTCACAACAATATACCACTTAATTATAAGACAAGTGACTTACTC 35873 | || ||| | || | ||||| || || || | ||||| |||||||| || || Sbjct 3764 GCAATTGAATGGATATTCGAGAACAACATCCCGCTCAGATATAAAACAAGTGATCTAATC 3705 Query 35874 AAAAATGATAAAGCGTTCCTTTACTGGTCAACAGTCAATCGTAACTGTGTAATATGCGGA 35933 || ||||| | | |||| | ||| | | || |||| | || || || || || || Sbjct 3704 AAGAATGACAGAACGTTTTTATACATGGCTACTATCAAGAGAAAGTGCGTTATCTGTGGC 3645 Query 35934 ACGCCACGAGCAGAACTTGCGCATTATCACACAGTAGGTCGAGGACGTAACAGACGAAAG 35993 | | | ||||| || || |||||||| |||||||||| ||||| |||||||| ||| Sbjct 3644 AAG---CATGCAGAGCTAGCACATTATCAAGCAGTAGGTCGTGGACGCAACAGACGCAAG 3588 Query 35994 ATAGATCACACAGACAACAAAGTATTAGCGCTATGTTCAAGACATCATAAAGAGCAGCAC 36053 ||||| || ||||||||||||||| |||||||| |||||||||||||| ||| Sbjct 3587 ATAGAACATTTTAACAACAAAGTATTAGGACTATGTTCCTTTCATCATAAAGAGCAACAC 3528 Query 36054 CAAATAGGTATAGATAGTTTTAATGAGAAATACAAATTATATGAAAGT--TGGGTGTCCG 36111 | || || || |||||||| ||| |||| || | ||| | ||| | |||||| || Sbjct 3527 GACATGGGCATGGATAGTTTCAATAAGAAGTATCATTTAGA--AAATTCATGGGTGGACG 3470 Query 36112 TAGATGAACGACTCAACCGAATGTTGAAAGGAG 36144 | || || |||| ||| |||| ||||||||| Sbjct 3469 TTGACGAGAGACTAAACAAAATGCTGAAAGGAG 3437 Score = 461 bits (510), Expect = 2e-125 Identities = 858/1258 (68%), Gaps = 14/1258 (1%) Strand=Plus/Minus Query 37310 ATGAAATCGAAAGTACAATCGTTGCTAGTTTACTTCAAAAACCGGACATAATTGAGAAGT 37369 ||||||| |||||||| || | |||||| || | || ||||| ||| | | ||||||| Sbjct 2365 ATGAAATTGAAAGTACTGTCATCGCTAGTCTATTACAGAAACCTGACTTGCTAGAGAAGT 2306 Query 37370 TACGTGTGAGACCGGAAATGTTCTCACATGATGGTATGAAGTCATTTATGGAATATGTAT 37429 || | | | ||| | |||||| | |||| | | || |||||| | || | | Sbjct 2305 TAAGAATTAAACCATACATGTTCCAAGATGAACATTTTAAAGAGTTTATGAATTACATCT 2246 Query 37430 TCGAAGTCGGTAAGGTAGATCATAACGAAATCTATTTAAAAACCACAAAAGATAAGTCAT 37489 | || || ||||| ||| ||||| || ||| | || | || || || |||| Sbjct 2245 TAGATCAAGGAAAGGTTGATTTGAACGAGATATATCTCAAGAGTGTGAAGGACAAATCAT 2186 Query 37490 TCCTAGATATGGACACCATTTCAAATTTGTATAACTCAAAATTTATAGGTTACGGATTCT 37549 || || || || ||| | || || |||||||| || ||||| || |||||||||| Sbjct 2185 TCTTAAGTAACGATGTAATTACTAAATTATATAACTCTAATTTTATTGGCTACGGATTCT 2126 Query 37550 TTGAAAGATATCAACAAGATTTGCTCAATCTTTATCAAAT----AGAGCGTACGCAAAAC 37605 |||| ||||||||||||||||| | | |||||||| | |||| | | ||| Sbjct 2125 TTGAGAGATATCAACAAGATTTATTACAAAACTATCAAATTATTAAAGCGAATG---AAC 2069 Query 37606 GTATTACAAGAATTCAATTCTGATCCGAATATAC---AAAATTTTGATGAAATGCTTAAC 37662 || | | || || | ||| || || ||| |||| |||||||| || | Sbjct 2068 TTACTGATAATTTTAAACAATTATC----TACACCTGAAACTTTTAATGAAATGGTTGAG 2013 Query 37663 AAACTACAAAAGGTCAGTTTAATTAGTGCAAGTGAAGAAAGTGGGACTaaaaaaaTTGTA 37722 ||||| || || | | | || | | | |||| ||| ||| || | || Sbjct 2012 AAACTTAAAGAGTTAACTAATATCACAACCAAAAAAGAGGATGGCACTCAACGATATGCT 1953 Query 37723 GATCACTTTGTCGAAGAATTATATAGCGAAGAACCAAAACAAAAAATCAATACAGGTTAT 37782 | || || || || || |||||||| || ||||| |||| | | || || ||| Sbjct 1952 AAACAATTAGTTGAGGATTTATATAGTGATGAACCTGTGCAAAGAGTAAAAACCAAATAT 1893 Query 37783 AAACTGGTGGATTACAAAATAGGTGGTTTAGAACCTACACAGTTGATTGTAATCGCTGCG 37842 ||||| |||| || ||||| |||||||| || || | || ||||| ||||| ||||| Sbjct 1892 AAACTCATGGACTATAAAATCGGTGGTTTTGAGCCAAGTCAATTGATAGTAATTGCTGCT 1833 Query 37843 AGACCGTCAGTAGGTAAAACGGGGTTTGCGCTTAATATGATGCTTAATATAGCGTCTCAA 37902 | || || ||||| || || ||||| | ||||||||| || || || ||| Sbjct 1832 CGTCCAAGTGTCGGTAAGACTGGATTTGCATTAAATATGATGTGGAACATTGCAAAACAA 1773 Query 37903 GGCTATAAAACTTCATTCTTCAGTCTAGAGACAACTGGCGTGTCTGTATTGAAAAGGATG 37962 ||| | |||| |||||||| ||| | || |||||||| | || |||| || Sbjct 1772 GGCCACCAAACATCATTCTTTAGTATTGAAACAACTGGAAAAAACATCTTACAAAGATTG 1713 Query 37963 TTATCAGCAGAAACTGGGATAGAACTAACTCGTATCAAAGAAATTAAAGATTTAGAACCG 38022 |||| | ||||| || || ||| ||||| ||| | || |||| | || Sbjct 1712 CTATCTACTATCACTGGTATCGAGTTAAACCGTATTAAAAATGTTCAAGACCTGACGCCA 1653 Query 38023 GATGAATTAACACGTTTAACAACTGCAGCAGACAGAATACTCAAACTTGATATAGATATA 38082 |||||||||| ||||||| ||| ||| |||||| ||| | | |||| | || Sbjct 1652 AATGAATTAACTGATTTAACAGGTGCTATAGATCAAATACTTAAATTAGGTATAAACATT 1593 Query 38083 CACGATAAAAGCAATATTACTACACATGATGTACGTAAACAAGCGATGAAAAACAAAGAT 38142 | || | |||| | || |||| || | | |||||||||||| | | || Sbjct 1592 AATGACGATAGCACAACAACACCACAAGACATTAGAGCACAAGCGATGAAGCATAGTGAC 1533 Query 38143 GTGCAACAGGTTATCTTCATTGACTACTTACAACTTATGCAGACAGACAGTAAGTTAGAT 38202 | ||| ||||| || ||||| ||| | ||| | ||| | ||||| | ||| | ||| Sbjct 1532 AAACCACAAGTTATATTTATTGATTACCTTCAATTAATGGAAACAGATACTAATGTTGAT 1473 Query 38203 CGTCGTAATGGTATCGAAAAGATATCGCGAGATTTGAAGATTATTGCAAATGAAACAGGT 38262 | || || | ||||||||||| || || ||||| || || |||||||||||||| Sbjct 1472 AGACGCGTTGCAGTTGAAAAGATATCACGCGACTTGAAAATCATAGCAAATGAAACAGGA 1413 Query 38263 GCAATTATTGTGTTGCTATCTCAATTGAGCAGAGGTGTAGAAACAAGAAATGACAAAAGA 38322 |||||||| || | || |||||||||| | || || ||| ||||||| || ||| | Sbjct 1412 GCAATTATAGTAGTTCTTTCTCAATTGAATCGTGGAGTTGAATCAAGAAACGATAAACGT 1353 Query 38323 CCTATGCTATCTGACATGAAAGAAGCAGGTGGAATTGAAGCAGATGCAAGTTTAGCTATG 38382 || ||| |||| ||||||||||| ||||||||||||||||||| |||||| | || ||| Sbjct 1352 CCGATGTTATCAGACATGAAAGAGTCAGGTGGAATTGAAGCAGACGCAAGTATGGCGATG 1293 Query 38383 TTGTTATATCGAGATGATTACTACAACCGTGATGATGTTGATGACTCAGGCAAGTCAATT 38442 |||| ||| |||||||||||||| | | ||||| | ||||| || || || || || Sbjct 1292 ATGTTGTATAGAGATGATTACTACGAACAAGATGAAGCAGATGAATCTGGTAAATCTATC 1233 Query 38443 GTTGAATGTAACATCGCAAAGAATAAAGACGGAGAAACAGGTGTAGTTGAGTTTGAGTAC 38502 ||||||||||| || || ||||| ||||| || ||||| ||||| |||| ||||| | Sbjct 1232 GTTGAATGTAATATAGCCAAGAACAAAGATGGTGAAACTGGTGTTATTGAATTTGAATTT 1173 Query 38503 TACAAGAAAACGCAGAGGTTCTTCACATGAAAGTAGTTGAATATCAAAAGTTGTTAGG 38560 ||||||||||| |||||||| ||||||||| |||| ||| |||| || | |||| Sbjct 1172 TACAAGAAAACACAGAGGTTTTTCACATGAGTGTAGCACAATTTCAACAGCTACTAGG 1115 Score = 100 bits (110), Expect = 8e-17 Identities = 80/94 (85%), Gaps = 2/94 (2%) Strand=Plus/Minus Query 21088 ttatttttaggcgcaagtttttgggaatgtttttggtttGGCAAATGTAAATAATTAGAT 21147 ||| |||| ||||||||||||||||||||||||||||| || ||||||||||||||| || Sbjct 18015 TTAGTTTTCGGCGCAAGTTTTTGGGAATGTTTTTGGTTCGGAAAATGTAAATAATTAAAT 17956 Query 21148 TATTAA-GTCGGC-TTTCGAGCCGGCTTTTTATT 21179 | | || |||||| | | | |||||||||||| Sbjct 17955 TTTAAAGGTCGGCGCATAGCGTCGGCTTTTTATT 17922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 140802528629894