Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterocephalus_20glaber_20[refseq_20GCF_5F000247695.1_202012-02-17] 4,229 sequences; 2,618,204,639 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq148 170 4e-37 seq40 138 2e-27 seq22 134 3e-26 seq12 134 3e-26 seq85 131 3e-25 seq15 131 3e-25 seq82 123 5e-23 seq41 116 7e-21 seq3 100 5e-16 seq18 95.1 2e-14 seq84 87.8 3e-12 >seq148 Length=4887613 Score = 170 bits (188), Expect = 4e-37 Identities = 169/219 (77%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303 ||||||| |||| ||| || ||||||||||| ||||| || ||||| || || || | Sbjct 4050555 AGGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATATTGTAATCAGAAAGAGTGCGG 4050614 Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 |||||||| | |||||| || || || ||||| || || |||||||| || |||||||| Sbjct 4050615 CCATCTTCAAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGAGGGATGCCTTCT 4050674 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423 || || || ||||| ||||| || ||| ||||| || | ||| ||||||| |||| Sbjct 4050675 TTATCCTGGATCTTGGCCTTTACATTCTCAATGGTATCACTGGGTTCCACTTCCAGGGTG 4050734 Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 ||||| || || || |||||||| || || ||||||||| Sbjct 4050735 ATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATT 4050773 >seq40 Length=22651954 Score = 138 bits (152), Expect = 2e-27 Identities = 167/227 (74%), Gaps = 4/227 (2%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | || | ||| || || |||||| ||||||| || || ||| Sbjct 7366486 CCACCTCGCAGGCGAAGCACTAGGTGCAGGGTAGACTCT----GGATGTTGTAGTCAGAG 7366541 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | ||| || ||||| ||||| || | || ||||| || || Sbjct 7366542 AGAGTTCGGCCATCCTCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGGGGG 7366601 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| ||||||||||| || || || ||||| |||||||||||| | || || Sbjct 7366602 ATGCCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCGATGGTGTCACTGGGCTCCACC 7366661 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||||||| || || || |||||||| ||||| |||||||| Sbjct 7366662 TCGAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACGAAGATCTGCAT 7366708 >seq22 Length=29172479 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||| ||| || ||||||||||| | |||||| || || ||||| | || ||||| || Sbjct 11894363 ACCAGGTGCAGGGTGGACTCTTTCTAGATGTTGTAGTCAGAGAGAGGTCTGCCATCCTCC 11894422 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | ||| || |||| ||||| || | || ||||| || || ||||| ||||||||||| Sbjct 11894423 AGCTGTTTGTCGGCAAATATCAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCTTGG 11894482 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 || || || ||||| || | ||||||| | || || || | |||||||| || Sbjct 11894483 ATTTTGGCTTTGACATTCTTGGTGGTGTCACTGGGCTCCACCTCGAGGGTGATGGCCTTG 11894542 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| |||||||| | ||| |||||||| Sbjct 11894543 CCCGTCAGGGTCTTCAGGAAGATCTGCAT 11894571 >seq12 Length=34595640 Score = 134 bits (148), Expect = 3e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| || || | ||| || || |||||||| |||| ||| || || ||| Sbjct 22518595 CCACCTCGCAGGCGAAACACTAGGTGCAGGGTAGACTCTTTCTGGACGTTGTAGTCAGAG 22518536 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || ||||| || | ||| | ||||| ||||| || | || ||||| || || Sbjct 22518535 AGAGTTTGGCCATCCTCCAGCTGTCTGCCGGCAAATATCAGACGCTGCTGGTCAGGGGGG 22518476 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGA-TTCTAC 68413 ||||| ||||||||||| || || || |||| || ||||||||| |||| || || Sbjct 22518475 ATGCCCTCCTTGTCTTGGATTTTGGCTCTGACATTCTTGATGGTGTC-ACTGAGCTCCAC 22518417 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||||||| || ||||| ||| || | ||||| |||||||| Sbjct 22518416 CTCGAGGGTGATGGTCTTGCCCGTCAGGATCCTCACGAAGATCTGCAT 22518369 >seq85 Length=11339561 Score = 131 bits (144), Expect = 3e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| | || || | |||| ||| || |||||||| || |||||||| || ||||| Sbjct 11133857 CCTCCCCTCAGACGGAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 11133916 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| | |||||| | || || || || || || ||||| | || Sbjct 11133917 AGGGTGCATCCATCTTCCAGCTGCTTGCTAGCAAAGATCAGCCTCTGCTGGTCAGTGGGG 11133976 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||||| ||||| ||||| || ||| ||||||| | ||| || Sbjct 11133977 ATGCCCGCCTTGTCTTGGATCTTGGCCTTCACATTCTCAGTGGTGTCACTGGGTTCAACC 11134036 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | | | ||||||| || || ||||||||||| | ||| || ||||| Sbjct 11134037 TTGAGGATGATGGTCTTGCCAGTGAGGGTCTTCATGAAGATTTGCAT 11134083 >seq15 Length=34776858 Score = 131 bits (144), Expect = 3e-25 Identities = 155/209 (74%), Gaps = 1/209 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||| ||| | |||||||| || |||||| | || || || || || | |||||||| Sbjct 23700285 ACCAGGTGCAAGGTGGACTCCTTCTGGATGCTGTAGTCAGACAGGGTGCGTCCATCTTCC 23700344 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | |||||| | ||| || || || || || |||| ||| ||| ||| ||||||||||| Sbjct 23700345 AGCTGCTTGCTGGCAAAGATCAGCCTCTGCTGGTTGGGGGGA-TGCTCTCCTTGTCTTGG 23700403 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| |||||||| || ||||| || | ||||||||| | ||||||| | || Sbjct 23700404 ATCTTGGCCTTGACATTCTGAATGGTTTCACTGGGTTCTACTTCGAGGGTGATGATGTTG 23700463 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || |||||||| | ||| || ||||| Sbjct 23700464 CCAGTAAGGGTCTTCATGAAGATTTGCAT 23700492 >seq82 Length=11338420 Score = 123 bits (136), Expect = 5e-23 Identities = 155/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGA--GAGTGTCCTCCCATCTT 68310 |||| |||||| |||||||| || |||||||| || | ||| | |||| || ||||| Sbjct 1447543 ACCAGGTGTAGGGTGGACTCCTTCTGGATGTTGTAGTTGGACGGGGTGTGTTC--ATCTT 1447486 Query 68311 CTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTT 68370 | || ||||| || || || || || || || ||||| || | ||| | |||||||||| Sbjct 1447485 CCAATTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGAGATGGCCTCCTTGTCTT 1447426 Query 68371 GAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTT 68430 | ||||| ||||| | ||| ||||||| | ||| | || | ||||||||| | Sbjct 1447425 GGATCTTGGCCTTCATATTCTCAGTGGTGTCACTGGGTTCACCGTCGAGGGTGATGGTCT 1447366 Query 68431 TTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||||||||||||| | ||| || ||||| Sbjct 1447365 GACCCGTGAGGGTCTTCATGAAGATTTGCAT 1447335 >seq41 Length=20498451 Score = 116 bits (128), Expect = 7e-21 Identities = 126/167 (75%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| | |||| | |||| ||| || |||||||| || ||||| || || || || Sbjct 848186 CCTCCCCTCAGGCAGAGCACCAGGTGCAGGGTGGACTCCTTCTGGATATTGTAGTCAGAC 848245 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| | |||||| ||||| || || || || |||||||| || || Sbjct 848246 AGGGTGCATCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGTTGGTCAGGGGGG 848305 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTC 68401 || || ||||||||||| ||||| ||||| | | ||| |||||||| Sbjct 848306 ATTCCCTCCTTGTCTTGGATCTTGGCCTTCATGTTCTCAATGGTGTC 848352 >seq3 Length=47073470 Score = 100 bits (110), Expect = 5e-16 Identities = 151/211 (72%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||| ||| || |||||||||| |||||||| | || |||| || || | || || Sbjct 10446403 ACCAGGTGCAGGTTGGACTCTTTCTGGATGTTGAAGTCAGAGAAGGTGCTGCAGTCCTCC 10446344 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 || || || ||||| || ||| ||||| | || ||||| ||||||||||| Sbjct 10446343 GTCTTTTTGTTAGCAAATATCAGATGTTGCTGGTCAGAGGGGATGCCGTCCTTGTCTTGG 10446284 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGT--CTGCTGATTCTACTTCCAAGGTGATGGTTT 68430 || || || || || ||| ||||||| ||| | ||| || || | ||||||||| | Sbjct 10446283 ATTTTGGCTTTAACATTCTCAATGGTGTTACTG-GGCTTC-ACCTCAAGGGTGATGGTCT 10446226 Query 68431 TTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | ||||| |||||||| ||||| |||| ||| Sbjct 10446225 TGCCCGTCAGGGTCTTCACGAAGATCTACAT 10446195 >seq18 Length=28467743 Score = 95.1 bits (104), Expect = 2e-14 Identities = 82/102 (80%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 68361 TCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAG 68420 ||||||||||| ||||| ||||||||| ||| |||||||| | ||| || || | | Sbjct 24039225 TCCTTGTCTTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGTTCCACCTCGAGG 24039284 Query 68421 GTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 |||||||| || || ||||||||||| ||||| || |||||| Sbjct 24039285 GTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATTTGCATT 24039326 >seq84 Length=11570013 Score = 87.8 bits (96), Expect = 3e-12 Identities = 150/214 (70%), Gaps = 8/214 (4%) Strand=Plus/Plus Query 68254 CCAAGTGTAGCGTGGACTCTTTTTGGATGTTAT---AATCGGAGAGTGTCCTCCCATCTT 68310 || ||| || ||||||||||| |||||||| | ||| || |||| | ||||||| Sbjct 8923798 CCGAGTACAGAGTGGACTCTTTCTGGATGTTGTTTGTATCAGAAGGTGTGCGGCCATCTT 8923857 Query 68311 C--TAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 | | | ||| || || || ||| | | || ||||| || ||||||||||| || || Sbjct 8923858 CCTTTCTTACTTGCCTGCAAAGATGCGCCCCTGCTGGTCAGG-GGAATGCCTTCTTTATC 8923916 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||||| ||||| | | ||| |||| || | || || |||| ||||||||| Sbjct 8923917 CCCGATCTTGGCCTTCAAGTTCTCAGTGGTATCAAC--GCTCCACCTCCAGGGTGATGGT 8923974 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || ||||| ||||| || | ||| || |||||| Sbjct 8923975 CTTGCCCGTCAGGGTATTCAGGAACATTTGCATT 8924008 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921573680735880