Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterocephalus_20glaber_20[refseq_20GCF_5F000247695.1_202012-02-17] 4,229 sequences; 2,618,204,639 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq117 82.4 5e-11 >seq117 Length=6347111 Score = 82.4 bits (90), Expect = 5e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 21822 TAATAGTGCAAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAA 21881 ||| || |||||||||||| || || || || | || ||||| ||||| || ||||| Sbjct 1553970 TAACAGGTCAAAATGCAAATCTTCATGAAGACCCTGACTGGCAAGACCATCACTCTGGAA 1554029 Query 21882 ACGGAAGCCGCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTA 21941 |||| || || || | | || | ||| || || |||||||| || | Sbjct 1554030 GTGGAACCCAGTGATACCATTGAGAATGTAAAGGCCAAGATCCAGGATAAAGAAGGCATC 1554089 Query 21942 CCTGTAAACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATG 22001 ||| |||| ||||| || |||||| | ||||| || || |||||| | ||| | Sbjct 1554090 CCTCCTGACCACCAGAGGCTCATCTTTACAGGCAAGCAGCTGGAAGATGGCCACACTCTT 1554149 Query 22002 GCCGATTACAATATTCAGAAGGAATCTACTCTTCA 22036 | || ||||| ||||||||||| || ||||| || Sbjct 1554150 TCTGACTACAACATTCAGAAGGAGTCCACTCTGCA 1554184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358106341912066