Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterocephalus_20glaber_20[refseq_20GCF_5F000247695.1_202012-02-17] 4,229 sequences; 2,618,204,639 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq148 114 1e-20 seq40 109 6e-19 seq16 96.9 4e-15 seq15 96.9 4e-15 seq18 91.5 2e-13 seq117 89.7 6e-13 seq97 89.7 6e-13 seq57 89.7 6e-13 seq27 89.7 6e-13 seq22 89.7 6e-13 seq21 89.7 6e-13 seq85 87.8 2e-12 seq39 86.0 7e-12 seq12 82.4 8e-11 >seq148 Length=4887613 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || ||||| | |||| |||| |||| ||| ||| || || ||||||||||||| Sbjct 4050546 CCACCTCTCAGGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATATTGTAATCAGAA 4050605 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 ||||| || | || || |||||||| || || || ||||| | ||||||||||| || Sbjct 4050606 AGAGTGCGGCCATCTTCAAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGAGGG 4050665 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161 | || || || ||| ||| || || | || | | || || || | |||||| Sbjct 4050666 ATGCCTTCTTTATCCTGGATCTTGGCCTTTACATTCTCAATGGTATCACTGGGTTCCACT 4050725 Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 || | |||||||| ||||| || || ||||| |||||||| |||||| Sbjct 4050726 TCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATT 4050773 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||| || || || ||||| |||| ||||| || | || || ||||| || || || || Sbjct 4050809 CTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCAAGCTGTTTGCCTGCAAA 4050868 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| | ||||||||| | || | || || || ||| ||| || || | | Sbjct 4050869 GATGAGCCTCTGCTGGTCAGGAGGGATGCCTTCTTTATCCTGGATCTTGGCCTTCACATT 4050928 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | || || || | |||||| || | |||||||| ||||| || || ||||| || Sbjct 4050929 CTCAATGGTATCACTGGGTTCCACTTCTAGGGTGATGGTCTTGCCAGTCAGGGTCTTCAC 4050988 Query 42197 AAAGATTTGCATTTTCAC 42214 || ||||||||||| || Sbjct 4050989 GAAAATTTGCATTTTGAC 4051006 >seq40 Length=22651954 Score = 109 bits (120), Expect = 6e-19 Identities = 135/185 (73%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 42024 TGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGT 42083 || || ||||| |||| ||||| || | || || ||||| || || || ||||| || Sbjct 7366524 TGGATGTTGTAGTCAGAGAGAGTTCGGCCATCCTCCAGCTGTTTGCCGGCAAATATCAGA 7366583 Query 42084 CGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACC 42143 ||||||||||| | || | || ||||||||| |||||| ||||| || | | Sbjct 7366584 CGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCGATG 7366643 Query 42144 GTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATT 42203 ||||| || | ||||| |||| |||||||| ||||| || || ||||| || ||||| Sbjct 7366644 GTGTCACTGGGCTCCACCTCGAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACGAAGATC 7366703 Query 42204 TGCAT 42208 ||||| Sbjct 7366704 TGCAT 7366708 >seq16 Length=31725842 Score = 96.9 bits (106), Expect = 4e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 41996 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 42055 |||||| | ||| | ||| |||||||||||| |||||||||| || ||| | | || Sbjct 21647039 CAACACAAGATGAAGGGTGGACTCCTTTTGAATGTTGTAATCAGACAAAGTACCTCCATC 21647098 Query 42056 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTC 42115 || || ||||||||||| || || || | ||||| || | || | | ||||| || Sbjct 21647099 TTCCAGTTGCTTACCAGCAAAGATCAGCCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 21647158 Query 42116 CATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGT 42175 | ||| || ||| | | | | ||||| | ||| || |||| ||||||||| Sbjct 21647159 CTGGATCTTGGCTTTTACATTTTCTATAGTGTCTGAGGGTTCAACCTCGAGCGTGATGGT 21647218 Query 42176 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 42211 || ||||| || || |||||||| || ||||| || Sbjct 21647219 CTTCCCCGTAAGAGTTTTTACAAAAATCTGCATCTT 21647254 >seq15 Length=34776858 Score = 96.9 bits (106), Expect = 4e-15 Identities = 159/228 (70%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 |||||| || | | | | ||||| ||||| ||| |||||| || || |||| |||| Sbjct 23700266 ACCTCCCCTCAGATGGAGCACCAGGTGCAAGGTGGACTCCTTCTGGATGCTGTAGTCAGA 23700325 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 ||| || || | || || |||||||| | || || || || | |||||||| || || Sbjct 23700326 CAGGGTGCGTCCATCTTCCAGCTGCTTGCTGGCAAAGATCAGCCTCTGCTGGTTGGGGGG 23700385 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | |||||||||||| ||| || |||| || | || || || | ||| || Sbjct 23700386 -ATGCTCTCCTTGTCTTGGATCTTGGCCTTGACATTCTGAATGGTTTCACTGGGTTCTAC 23700444 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||| |||||| | ||||| || || ||||| | ||||||||||| Sbjct 23700445 TTCGAGGGTGATGATGTTGCCAGTAAGGGTCTTCATGAAGATTTGCAT 23700492 >seq18 Length=28467743 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 24050708 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 24050767 Query 57067 TACTACCGAGGAT 57079 ||||| ||||||| Sbjct 24050768 TACTAACGAGGAT 24050780 Score = 84.2 bits (92), Expect = 2e-11 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 57020 AATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGA 57078 |||||||||| |||||||||||||||| |||| |||||||||||||||||| |||||| Sbjct 24047162 AATCGAACCCCGGTCTCCCGCGTGACAAGCGGGGATACTCACCACTATACTAACGAGGA 24047220 >seq117 Length=6347111 Score = 89.7 bits (98), Expect = 6e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 42006 TGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGC 42065 |||| ||| |||||| ||||| ||||| |||| ||||| | | || || |||||| Sbjct 1554184 TGCAGAGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGAGTGTGGCCATCTTCCAGCTGC 1554125 Query 42066 TTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTT 42125 || || | || ||||| | ||| ||||| | || | || || || ||| ||| || Sbjct 1554124 TTGCCTGTAAAGATGAGCCTCTGGTGGTCAGGAGGGATGCCTTCTTTATCCTGGATCTTG 1554065 Query 42126 TGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTT 42185 || | || | | || || || | |||||| || | |||||||| ||||| || Sbjct 1554064 GCCTTTACATTCTCAATGGTATCACTGGGTTCCACTTCCAGAGTGATGGTCTTGCCAGTC 1554005 Query 42186 AGCGTCTTTACAAAGATTTGCATTTTCAC 42214 || ||||| | |||||||||||||| || Sbjct 1554004 AGGGTCTTCATGAAGATTTGCATTTTGAC 1553976 >seq97 Length=8736462 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 3667 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 3608 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 3607 TACTAACGAGGA 3596 >seq57 Length=14644473 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 10788492 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 10788551 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 10788552 TACTAACGAGGA 10788563 >seq27 Length=25514964 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 24302478 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 24302419 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 24302418 TACTAACGAGGA 24302407 >seq22 Length=29172479 Score = 89.7 bits (98), Expect = 6e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 41999 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAG-TCCGCTCGTCAT 42057 ||||| |||| ||| ||| || | || ||||| |||| |||| || || | || | Sbjct 11894362 CACCAGGTGCAGGGTGGACTCTTTCTAGATGTTGTAGTCAGAGAGAGGTCTGC-CATCCT 11894420 Query 42058 CTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCA 42117 | ||||| || | || ||||| || ||||||||||| | || | || ||||||||| Sbjct 11894421 CCAGCTGTTTGTCGGCAAATATCAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCTT 11894480 Query 42118 TGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTT 42177 |||||| ||||| || ||||| || | ||||| |||| ||||||| | Sbjct 11894481 GGATTTTGGCTTTGACATTCTTGGTGGTGTCACTGGGCTCCACCTCGAGGGTGATGGCCT 11894540 Query 42178 TGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||||| || ||||| | ||||| ||||| Sbjct 11894541 TGCCCGTCAGGGTCTTCAGGAAGATCTGCAT 11894571 >seq21 Length=28505965 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 11274126 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 11274185 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 11274186 TACTAACGAGGA 11274197 >seq85 Length=11339561 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 |||||| || | ||| | ||||| |||| ||| |||||| || || ||||| || | Sbjct 11133856 ACCTCCCCTCAGACGGAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 11133915 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 ||| || | | || || |||||||| | ||| || || || | ||||||||| | || Sbjct 11133916 CAGGGTGCATCCATCTTCCAGCTGCTTGCTAGCAAAGATCAGCCTCTGCTGGTCAGTGGG 11133975 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | || | ||||||| ||| || || | || | ||||| || | ||| || Sbjct 11133976 GATGCCCGCCTTGTCTTGGATCTTGGCCTTCACATTCTCAGTGGTGTCACTGGGTTCAAC 11134035 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || ||||||| ||||| || || ||||| | ||||||||||| Sbjct 11134036 CTTGAGGATGATGGTCTTGCCAGTGAGGGTCTTCATGAAGATTTGCAT 11134083 >seq39 Length=21454635 Score = 86.0 bits (94), Expect = 7e-12 Identities = 55/60 (92%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 57020 AATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGAT 57079 |||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||| Sbjct 17474576 AATCAAACCCTGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTATACTAATGAGGAT 17474517 >seq12 Length=34595640 Score = 82.4 bits (90), Expect = 8e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 41994 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 42053 || ||||| | |||| || ||| || || | ||||| |||| ||||| | | Sbjct 22518583 CGAAACACTAGGTGCAGGGTAGACTCTTTCTGGACGTTGTAGTCAGAGAGAGTTTGGCCA 22518524 Query 42054 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTG 42113 || || ||||| | || || ||||| || ||||||||||| | || | || ||||||| Sbjct 22518523 TCCTCCAGCTGTCTGCCGGCAAATATCAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTG 22518464 Query 42114 TCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATG 42173 || |||||| | ||| || | ||||| || ||||| |||| |||||| Sbjct 22518463 TCTTGGATTTTGGCTCTGACATTCTTGATGGTGTCACTGAGCTCCACCTCGAGGGTGATG 22518404 Query 42174 GTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || |||||||| || || | || ||||| ||||| Sbjct 22518403 GTCTTGCCCGTCAGGATCCTCACGAAGATCTGCAT 22518369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543184084413360