Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterocephalus_20glaber_20[refseq_20GCF_5F000247695.1_202012-02-17] 4,229 sequences; 2,618,204,639 total letters Query= NC_013195.1 Length=40761 Score E Sequences producing significant alignments: (Bits) Value seq371 535 1e-147 >seq371 Length=40469 Score = 535 bits (592), Expect = 1e-147 Identities = 863/1234 (70%), Gaps = 11/1234 (1%) Strand=Plus/Minus Query 10299 CAATTCGAAATTGAAAGTACAATAATCGCTACGCTACTTAAACAACCGGACGTATTAGAA 10358 |||| |||||||||||||| | ||||||| ||| | | |||| ||| | |||| Sbjct 2369 CAATATGAAATTGAAAGTACTGTCATCGCTAGTCTATTACAGAAACCTGACTTGCTAGAG 2310 Query 10359 AAGATAAGAGTTAAAGATTACATGTTTACGAACGAAAAGTTTAAAACCTTTTTCAATTAT 10418 ||| ||||| ||||| |||||||| | ||| | |||||| ||| | ||||| Sbjct 2309 AAGTTAAGAATTAAACCATACATGTTCCAAGATGAACATTTTAAAGAGTTTATGAATTAC 2250 Query 10419 GTAATGGACGTCGGAAAGATAGATCATCAAGAAATCTATTTAAAAGCAACTAAAGATAAA 10478 | | || |||||| | ||| | || || ||| | || || || ||| Sbjct 2249 ATCTTAGATCAAGGAAAGGTTGATTTGAACGAGATATATCTCAAGAGTGTGAAGGACAAA 2190 Query 10479 GAATTTTTAGATGCAGATACTATAACTAAACTTTACAACTCCGATTTCATTGGATATGGC 10538 ||| ||| | ||| || |||||| | || ||||| |||| ||||| || || Sbjct 2189 TCATTCTTAAGTAACGATGTAATTACTAAATTATATAACTCTAATTTTATTGGCTACGGA 2130 Query 10539 TTCTTTGAACGTTATCAACAAGAATTATTGGAAAGTTATCAGCTCAACAAAGCTAACGAA 10598 |||||||| | ||||||||||| ||||| ||| ||||| | | ||||| || ||| Sbjct 2129 TTCTTTGAGAGATATCAACAAGATTTATTACAAAACTATCAAATTATTAAAGCGAATGAA 2070 Query 10599 -TTGGTAACTGAGTTCAAACAACAACCTACGAACCAAAACTTT-AACAACTTGATTGATG 10656 || | | | | || |||||| | |||| | | ||||||| || | || |||| Sbjct 2069 CTTACTGA-TAATTTTAAACAATTATCTAC-ACCTGAAACTTTTAATGAAATGGTTGAGA 2012 Query 10657 AACTCAAGGATTTAAAAACAATTACTAACAAAAAAGAAGATGGAAC-CAAGAAGTTTGTT 10715 |||| || || |||| | || || | ||||||||| ||||| || ||| | | || | Sbjct 2011 AACTTAAAGAGTTAACTAATATCACAACCAAAAAAGAGGATGGCACTCAACGA-TATGCT 1953 Query 10716 GANNNNNNNNNNNNNNNNNNATACAGCGATAGCCCTAAGAAGCAAATTAAGACGGGTTAC 10775 | ||| || ||| ||| | | | | || || || Sbjct 1952 AAACAATTAGTTGAGGATTTATATAGTGATGAACCTGTGCAAAGAGTAAAAACCAAATAT 1893 Query 10776 AAGCTAATGGATTACAAAATAGGGGGATTAGAACCATCACAATTAATCGTCATCGCAGCG 10835 || || ||||| || ||||| || || || || ||| ||||| || || || || || Sbjct 1892 AAACTCATGGACTATAAAATCGGTGGTTTTGAGCCAAGTCAATTGATAGTAATTGCTGCT 1833 Query 10836 CGTCCCTCAGTGGGTAAGACAGGTTTTGCATTAAACATGATGCTGAACATAGCACAAAAT 10895 ||||| || |||||||| || ||||||||||| |||||| |||||| ||| || | Sbjct 1832 CGTCCAAGTGTCGGTAAGACTGGATTTGCATTAAATATGATGTGGAACATTGCAAAACAA 1773 Query 10896 GGATACAAAACATCTTTCTTTAGTCTCGAAACAACCGGCACATCGGTATTGAAACGTATG 10955 || || ||||||| ||||||||| | |||||||| || | | | || || | || Sbjct 1772 GGCCACCAAACATCATTCTTTAGTATTGAAACAACTGGAAAAAACATCTTACAAAGATTG 1713 Query 10956 TTATCAACAATTACTGGTATTGAGTTAACAAAGATAAAAGAAAT-CAGGAACTTAACGCC 11014 |||| || || |||||||| ||||||| || ||| | | || || || | |||| Sbjct 1712 CTATCTACTATCACTGGTATCGAGTTAAACCGTATTAAAAATGTTCAAGACCTGA-CGCC 1654 Query 11015 GGATGACTTAACAAAGTTAACGAATGCGATGGATAAAATCATGAAATTAGGCATTGATAT 11074 |||| ||||| | ||||| ||| || ||| |||| | |||||||| || | || Sbjct 1653 AAATGAATTAACTGATTTAACAGGTGCTATAGATCAAATACTTAAATTAGGTATAAACAT 1594 Query 11075 TTCTGATAAAAGTAATATCACACCGCAAGATGTGCGAGCACAAGCAATGAGGCATTCAGA 11134 | ||| | || | | ||||| ||||| | |||||||||| |||| |||| || Sbjct 1593 TAATGACGATAGCACAACAACACCACAAGACATTAGAGCACAAGCGATGAAGCATAGTGA 1534 Query 11135 CGGTCAACAAGTTATTTTTATAGATTACCTTCAACTGATGGATACTGATGCGAAAGTTGA 11194 | | ||||||||| ||||| |||||||||||| | ||||| || ||| | || ||||| Sbjct 1533 CAAACCACAAGTTATATTTATTGATTACCTTCAATTAATGGAAACAGATACTAATGTTGA 1474 Query 11195 TAGACGTGTAGCAGTAGAAAAGATATCACGTGACTTAAAGATAATCGCTAATGAGACAGG 11254 |||||| || ||||| |||||||||||||| ||||| || || || || ||||| ||||| Sbjct 1473 TAGACGCGTTGCAGTTGAAAAGATATCACGCGACTTGAAAATCATAGCAAATGAAACAGG 1414 Query 11255 CGCAATCATCGTACTACTTTCACAACTGAATCGTGGCGTCGAGTCTAGACAGGATAAAAG 11314 ||||| || ||| | ||||| ||| |||||||||| || || || ||| | |||||| | Sbjct 1413 AGCAATTATAGTAGTTCTTTCTCAATTGAATCGTGGAGTTGAATCAAGAAACGATAAACG 1354 Query 11315 ACCAATGCTATCGGACATGAAAGAATCAGGCGGAATAGAAGCAGATGCGAGTTTAGCAAT 11374 || ||| |||| ||||||||||| ||||| ||||| |||||||| || ||| | || || Sbjct 1353 TCCGATGTTATCAGACATGAAAGAGTCAGGTGGAATTGAAGCAGACGCAAGTATGGCGAT 1294 Query 11375 GTTACTTTACCGCGATGATTATTATAACCGTGACGAAGATGACAGTATCACTGGCAAATC 11434 | | | || | |||||||| || | | || |||| || | || |||| ||||| Sbjct 1293 GATGTTGTATAGAGATGATTACTACGAACAAGATGAAGCAGA-TGAAT--CTGGTAAATC 1237 Query 11435 TATTGTTGAATGTAACATAGCCAAAAACAAAGACGGTGAAACCGGAATAATTGAATTTGA 11494 ||| ||||||||||| |||||||| |||||||| |||||||| || | ||||||||||| Sbjct 1236 TATCGTTGAATGTAATATAGCCAAGAACAAAGATGGTGAAACTGGTGTTATTGAATTTGA 1177 Query 11495 GTATTACAAGAAGACTCAGAGGTTTTTCACATGA 11528 | ||||||||| || |||||||||||||||||| Sbjct 1176 ATTTTACAAGAAAACACAGAGGTTTTTCACATGA 1143 Score = 374 bits (414), Expect = 2e-99 Identities = 574/811 (71%), Gaps = 12/811 (1%) Strand=Plus/Minus Query 7314 GATATTAGTTACTCCACAAATAGAAATAGAGCTAGGGAGTTTAACGGTATGGAAGAAGCG 7373 || ||||| ||||| || | | |||||| || |||||||||||| | || |||| | Sbjct 5266 GAAATTAGCTACTCAACGCAGTTTAGTAGAGCAAGAGAGTTTAACGGTTTAGATGAAGTG 5207 Query 7374 AGTATCAATATGGATTATCACAAAGCAATCAAGAAAACAGTGACAGAAACTATTGAGTAC 7433 | || ||||| ||||||| || || || | ||| | |||| | | || Sbjct 5206 ACAATTGATATGTCATATCACATGGCGATTAAACATACACATATAGAAGAAGATAAATAT 5147 Query 7434 GAGGAGGTAGAACATGACTGAACAAACATTATTTGAACAGTTGAACAGTAAAAACGTGAA 7493 |||||| |||| |||| |||| ||||||||||||||||||| |||| | ||||| Sbjct 5146 GAGGAGTTAGATTATGAGTGAAAAAACATTATTTGAACAGTTAAACACAATTAACGTATC 5087 Query 7494 TGATCATACAGAACaaaaaaaTGGAT-TAACTTATCTAGCATGGTCATATGCACACCAAG 7552 ||||||| ||| | || ||||| | ||||| || |||| ||| || ||||||| || Sbjct 5086 TGATCATGTTGAAAAGAAGAATGGCTATAACT-ATTTAGCTTGGACACATGCACATGAAC 5028 Query 7553 AGCTGAAAAAGATTGACCCAAACTACACAGTAAAAGTACACGAGTTTCCACATCCAGATA 7612 | || ||||| ||||||| ||||| | |||| |||| ||||||||||| || |||| Sbjct 5027 AACTTAAAAATGTTGACCCCAACTATGAAATAAAGATACATGAGTTTCCACACCCGGATA 4968 Query 7613 TTAACACAGAA--AATTATTTTGTACCTTATTTGGCTACACCAGAAGGCTATTTTGTACA 7670 | | || | | || ||||| ||||||||| | || || |||||||| ||||||||| | Sbjct 4967 T-AGCAAATGACCAAGTATTT-GTACCTTATCTAGCAACTCCAGAAGGTTATTTTGTAAA 4910 Query 7671 GGTATCTGTGACTGTGAAAGATAGTACAGAGACTGAGTGGCTTCCAGTATTGGACTTTAG 7730 ||||| | | | |||| || ||| || | || ||| | |||||||| ||||||| Sbjct 4909 AGTATCAATCATATTAAAAGGTATTACCGAATCAGAATGGTTACCAGTATTAGACTTTAA 4850 Query 7731 AAATAAATCGCTTGCTAAAGGTAGTGCAACAACTTTCGATATTAACAAAGCGCAAAAACG 7790 ||| || ||| | || ||||| ||||| || |||||||| || ||||| |||||||| Sbjct 4849 AAACAAGTCGTTAGCGAAAGGGCAAGCAACTACATTCGATATCAATAAAGCTCAAAAACG 4790 Query 7791 ATGTTTTGTTAAAGCTTCGGCTTTACACGGTTTAGGCTTATATATCTACAACGGCGAGGA 7850 || ||||||||||| | || |||||||| ||||| |||| ||||||||| | || || Sbjct 4789 TTGCTTTGTTAAAGCAGCAGCATTACACGGCTTAGGTCTATACATCTACAACCGTGAAGA 4730 Query 7851 ACTACCAAGTGCAAGTGACAACGATATTACAGAATTAGAAGAGCGTATCAATCAGTTCGT 7910 | |||| | ||| ||| | ||| ||| ||||||| || | | || || Sbjct 4729 ATTACCGAATGCTAGTAGTGAAGATGCACAAGAGCTAGAAGATAAGATAGCTGAATTTGT 4670 Query 7911 GAACTTATCTCAAGAAAAAGGGCGAGATGCAACTATCGATAAAACGATGAGATGGCTAAA 7970 | | || ||||||||||| |||||||||| | || ||||| ||| | ||| || Sbjct 4669 ACGCATTTCACAAGAAAAAGGCAGAGATGCAACATTGGAAAAAACAATGCGTTGGTTAGG 4610 Query 7971 AATATCTAACATTAATAAATTAAGTCAAAAACAAATCGCAGAAGCACACCAAAAATTAGA 8030 || || |||||||| |||||| ||| | ||| |||| || |||| |||| Sbjct 4609 CATTGAAAATATTAATAAGTTAAGTGGCAAAGGCTTGGCAACAGCAAACGCAAAACTAGA 4550 Query 8031 TGCGGGATTAAAACAATTGGATAGTGAGGAGAAACAATAATGTTAAACAGAGCAGTATTA 8090 ||| |||||||||||||| || | ||||||| ||||||| || | || | ||| Sbjct 4549 TGCAGGATTAAAACAATTAGACA---AGGAGAATGAATAATG---AATTTAACAATCTTA 4496 Query 8091 GTAGGACGCTTAACAAAAGACCCAGAATTAA 8121 ||||| | ||||||||| |||| ||| Sbjct 4495 ACGGGACGAATCACAAAAGACTTAGAACTAA 4465 Score = 224 bits (248), Expect = 3e-54 Identities = 475/702 (68%), Gaps = 9/702 (1%) Strand=Plus/Minus Query 8478 GATGATGACTTACCGTTCTGATTGGAATGATTAGATGCCAATAATTACTAGTTATATCAC 8537 ||||| || |||||||||| | || |||||| ||| | |||| | | || ||| Sbjct 4126 GATGACGATTTACCGTTCTAA--GGTGTGATTATATGGCGGTAATAAAAAACTACATCCA 4069 Query 8538 TCAAGATGACGGTACAACAACAGTTGTCATCTCGGGTGTTGAATTAGGCAATAAAGAAAC 8597 ||| |||| || |||| ||| | ||||| |||||| | | || ||||| Sbjct 4068 ACAAAATGATGGCACAATAACTGCCGTCATTGAGGGTGTAACACTTACTAACAAAGACTT 4009 Query 8598 ATTACTACTTGATAACGGATTTGATGTGGAAGTCGATGTAAGCGTCATAGATCCGTTTCA 8657 |||||||||||||||||||| || || ||| | ||||| ||| | || || | | Sbjct 4008 TTTACTACTTGATAACGGATTAGAAGTTGAATGCAATGTAGCAGTCGTTGACCCATACAA 3949 Query 8658 AATTACCGGCAAGCAACGACGAAAAATATTCGCGCTTGTCAAAGACATAGAAGAATATAC 8717 ||| || | |||||||| ||||| ||||||| ||||| || || ||||||| |||| Sbjct 3948 AATAACTGATAAGCAACGTAGAAAAGTATTCGCTCTTGTGAACGATATAGAAGCTCATAC 3889 Query 8718 AGGTCAACCAATGGACTATATGCGACATATGTTCATCGAGTATGTAAG-GACTTACTACG 8776 ||| ||| || |||||| | || | ||| || |||||| | | || |||| Sbjct 3888 AGGCACGCCACAAGATTATATGAGGAATGTATTCCAAGAATATGTACGTGTGCTA-TACG 3830 Query 8777 GCTATGATGAACGTATTTCACTAAGTAATTGTACGAGAACACAAGCAAGTCAAATCATTG 8836 |||| ||||| || || ||||| | ||||| | || | | ||||||||||| || | Sbjct 3829 GCTACGATGAGCGCATATCACTTGCTGATTGTTCTAGGAAAGTGGCAAGTCAAATTATAG 3770 Query 8837 AAGCAACGCTTGACTGGACGTTCTACAATGACATACCACTTAGCTACAAAACGAGTAATC 8896 | | | | |||| |||| ||| | || |||| || || || || ||||| ||| ||| Sbjct 3769 ATGTAGCAATTGAATGGATATTCGAGAACAACATCCCGCTCAGATATAAAACAAGTGATC 3710 Query 8897 TACTGAAACAAGATAAATCATTCTTATACTGGTCAACTGTTAACCGCAACTGTGTAATAT 8956 || | || | || | | | || |||||| | | ||| | || | || || || || | Sbjct 3709 TAATCAAGAATGACAGAACGTTTTTATACATGGCTACTATCAAGAGAAAGTGCGTTATCT 3650 Query 8957 GCGGAAAGCCTCACGCAGACCTGGCACATTATGAAGCAGTCGGCAGAGGTATGAACAGAA 9016 | || ||| || ||||| || ||||||||| ||||||| || | || |||||| Sbjct 3649 GTGGCAAG---CATGCAGAGCTAGCACATTATCAAGCAGTAGGTCGTGGACGCAACAGAC 3593 Query 9017 ACAAGATGAATCACTACGACAAACATGTGTTAGCACTGTGTAGACAACATCATAATGAAC 9076 |||||| | || | |||| | || |||| ||| ||| |||||||| || | Sbjct 3592 GCAAGATAGAACATTTTAACAACAAAGTATTAGGACTATGTTCCTTTCATCATAAAGAGC 3533 Query 9077 AGCACGCAATTGGTGTTAAGTCGTTT-GATGATAAATATCAATTGCATGACTCGTGGATA 9135 | |||| || || | | | |||| || | || ||||| || | | || ||| | Sbjct 3532 AACACGACATGGGCATGGA-TAGTTTCAATAAGAAGTATCATTTAGAAAATTCATGGGTG 3474 Query 9136 AAAGTTGATGAGAGGCTCAATAAAATGTTGAAAGGAGAGAAA 9177 | ||||| ||||| || || |||||| ||||||||| |||| Sbjct 3473 GACGTTGACGAGAGACTAAACAAAATGCTGAAAGGAGTGAAA 3432 Score = 187 bits (206), Expect = 6e-43 Identities = 266/375 (71%), Gaps = 6/375 (2%) Strand=Plus/Minus Query 29823 AAAGTATTATCAGCAAAATTAAAAGTCATATCGGCGGTATGGTAGATGCTATTAAAAAAG 29882 || ||||||| ||||||||||||||| || || ||||||||| | |||| | Sbjct 28631 AAGGTATTATTGACAAAATTAAAAGTCACATAACTGGCATGGTAGATAAAGTAAAAAGTG 28572 Query 29883 GACTTAATAAATTAATCGACGGTTTAAACTGGGTCGGTGGTAAGTTGGGCATGGATAAAA 29942 |||| || ||| | ||||| ||| | |||||||| | || || | || ||||| ||| Sbjct 28571 GACTAAACAAACTTATCGAAGGTGTTAACTGGGTAGCAGGAAAACTTGGAATGGACAAAC 28512 Query 29943 TACCTAA------GTTACATACTGGTACAGAGCACACACATACTACTACAAGATTAGTTA 29996 ||||||| |||||| || ||||| || || || |||| ||||| | | |||| Sbjct 28511 TACCTAAAATCAAGTTACACACAGGTACTGAACATACTAATACGACTACTAACGTTGTTA 28452 Query 29997 AGAACGGTAAGATTGCACGTGACACATTCGCTACAGTTGGAGATAAGGGACGCGGAAATG 30056 | |||||||||||||| ||||||||||| || || || |||| || || |||| Sbjct 28451 AAAACGGTAAGATTGCTAAAGACACATTCGCAACTGTGGGCGATAGAGGTAAAGGTAATG 28392 Query 30057 GTCCAAATGGTTTTAGAAACGAAATGATTGAATTCCCTAATGGTAAACGTGTAATCACAC 30116 |||| |||||| || | ||||||||| | || || |||||| || |||||||| Sbjct 28391 GTCCCGGTGGTTTCCGACATGAAATGATTCGTTATCCAAACGGTAAAACTGCAATCACAC 28332 Query 30117 CAAATACAGATACTACTGCTTATTTACCTAAAGGCTCAAAAGTATATAACGGTGCACAAA 30176 | || | |||||| || || ||| | || |||| || | || || || || || || | Sbjct 28331 CTAACAGAGATACAACAGCATATCTTCCACAAGGTTCTACTGTCTACAATGGCGCGCAGA 28272 Query 30177 CTTATTCAATGTTAA 30191 | || ||||||||| Sbjct 28271 CACATGCAATGTTAA 28257 Score = 132 bits (146), Expect = 1e-26 Identities = 278/420 (66%), Gaps = 12/420 (3%) Strand=Plus/Minus Query 12397 TGAGTAAATACAACGCTAAGAAAGTTGAGTACAAAGGAATTGTATTTGATAGCAAAGTAG 12456 ||||||||||||| || |||||||||||||| ||||| || || ||||||||||| | Sbjct 748 TGAGTAAATACAATGCAAAGAAAGTTGAGTATAAAGGTATAACGTTCGATAGCAAAGTTG 689 Query 12457 AGTGCGAATATTACCAATATTTAGAA-----AGTAAT-ATGAATGGCACTAACTATGATC 12510 | || || || ||| | || |||||| | |||| || |||| | ||||| Sbjct 688 AATGTGATTACTACAAGTACTTAGAACAACGATTAATTATAGATGGTTATGACTAT---- 633 Query 12511 GTATCGAACTACAACCTAAATNNNNNNNNNNNNNNNNNNNNGGGAAGCAAAGACCGATTA 12570 ||||| ||||||| | || || || ||| | | | Sbjct 632 --ATCGAGATACAACCGAGATATGAGCTAATACCTAAATTTGGTAAACAACGTAAAACTG 575 Query 12571 CGTATATAGCCGATTTCTCTTTGTGGAAGGAAGGGAAACTGGTTGAAGTTATAGACGTTA 12630 ||||| || || || | | ||||| | | || || ||||||| |||||||||| Sbjct 574 AATATATTGCAGACTTTGCACTATGGAATAACGACAAGTTGATTGAAGTCATAGACGTTA 515 Query 12631 AAGGTAAGGCGACTGAAGTTGCCAACATCAAAGCGAAGATATTCAGATATCAGTATAGAG 12690 |||| | |||||| ||| || || | || |||||| |||| ||||||| ||| Sbjct 514 AAGGCATGGCGACAGAAACGGCTAAGTTAAAGGCGAAGTTATTTAGATATCTATATCCCA 455 Query 12691 ATGTGAATTTAACGTGGATATGTAAAGCGCCTAAATACACAGGTCAAGAATGGATGGTAT 12750 |||| || | || |||||||||||||| ||||| ||||||||| |||| ||| | | Sbjct 454 ATGTAAAACTTACTTGGATATGTAAAGCACCTAAGTACACAGGTAAAGACTGGGTAACGT 395 Query 12751 ATGAGGACTTAGTGAAAGTCAGACGTAAAAGAAAAAGAGAAATGAAGTGATTTAATGCAA 12810 |||| || || || || ||||| || | || | || | || |||||| ||| || Sbjct 394 ATGAAGAATTGAACAAGGTGAGACGCGAACGCAAGAAAGCTAAGAGGTGATTAGATGAAA 335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130307055732454