Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterocephalus_20glaber_20[refseq_20GCF_5F000247695.1_202012-02-17] 4,229 sequences; 2,618,204,639 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq16 150 4e-31 seq148 143 6e-29 seq117 125 2e-23 seq126 114 3e-20 seq39 109 1e-18 seq41 95.1 3e-14 seq85 89.7 1e-12 seq40 87.8 4e-12 seq35 87.8 4e-12 seq15 86.0 1e-11 >seq16 Length=31725842 Score = 150 bits (166), Expect = 4e-31 Identities = 161/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| ||||| || || || ||||||||||| | |||||| |||| |||||| | ||| Sbjct 21647036 TCTCAACACAAGATGAAGGGTGGACTCCTTTTGAATGTTGTAATCAGACAAAGTACCTCC 21647095 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 ||||||||| ||||| || || ||||| || | ||||| || ||| ||||||||| Sbjct 21647096 ATCTTCCAGTTGCTTACCAGCAAAGATCAGCCTTTGCTGATCAGGAGGAATTCCTTCCTT 21647155 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 ||||| ||||| || || ||| | ||||||| | ||| || || | |||||| Sbjct 21647156 ATCCTGGATCTTGGCTTTTACATTTTCTATAGTGTCTGAGGGTTCAACCTCGAGCGTGAT 21647215 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| |||||||| |||||||| || Sbjct 21647216 GGTCTTCCCCGTAAGAGTTTTTACAAAAATCTG 21647248 >seq148 Length=4887613 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||||||||| ||||| |||||||| |||| |||||||||| | ||| | |||||| Sbjct 4050333 AGGACAAGGTGCAGAGTGGACTCCTTCTGGATATTGTAGTCAGAAAGAGTGCGGCCATCT 4050392 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| || || |||||||| | ||||||||| ||| || |||||| ||| Sbjct 4050393 TCCAGCTGCTTCCCTGCAAAGATGAGCCTCTGCTGGTCAGGAGGGATGCCTTCTTTATCC 4050452 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| |||||| || | ||| || | | || || |||| ||||| ||| Sbjct 4050453 TGGATCTTGGCCTTCACATTCTCAATGGTATCACTAGGCTCCACCTCCAGGGTGATGGTC 4050512 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || |||||||| || || Sbjct 4050513 TTGCCAGTCAGGGTCTTCACAAAGATCTG 4050541 Score = 134 bits (148), Expect = 3e-26 Identities = 161/218 (74%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| ||||| ||||| || |||| ||||||||||| | ||| | |||||| Sbjct 4050789 AGGACCAGGTGCAGAGTAGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCT 4050848 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||| || || || |||||||| | ||||||||| ||| || |||||| ||| Sbjct 4050849 TCAAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGAGGGATGCCTTCTTTATCC 4050908 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| |||||| || | ||| || | | ||| || || | ||||| ||| Sbjct 4050909 TGGATCTTGGCCTTCACATTCTCAATGGTATCACTGGGTTCCACTTCTAGGGTGATGGTC 4050968 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635 || || || || || ||||| |||||||| |||||| Sbjct 4050969 TTGCCAGTCAGGGTCTTCACGAAAATTTG---CATTTT 4051003 >seq117 Length=6347111 Score = 125 bits (138), Expect = 2e-23 Identities = 159/218 (73%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||||||||| ||||| |||||||| || | ||||||||||| | ||| |||||| Sbjct 1554193 AGGACAAGGTGCAGAGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGAGTGTGGCCATCT 1554134 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| || | |||||||| | ||| ||||| ||| || |||||| ||| Sbjct 1554133 TCCAGCTGCTTGCCTGTAAAGATGAGCCTCTGGTGGTCAGGAGGGATGCCTTCTTTATCC 1554074 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| || || | ||| || | | ||| || |||| ||||| ||| Sbjct 1554073 TGGATCTTGGCCTTTACATTCTCAATGGTATCACTGGGTTCCACTTCCAGAGTGATGGTC 1554014 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635 || || || || || |||| || ||||| |||||| Sbjct 1554013 TTGCCAGTCAGGGTCTTCATGAAGATTTG---CATTTT 1553979 >seq126 Length=6421402 Score = 114 bits (126), Expect = 3e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || ||||||| |||| || || | ||||||||||| | |||||| || | |||||| Sbjct 2409818 CGGAGTCTCAATGCAAGATGAAGGATGGACTCCTTTTGAATGTTGTAATCCGACAAAGTA 2409877 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| |||||| ||||| || || ||||| || | ||||| || ||| ||||||| Sbjct 2409878 CGTCCATGTTCCAGTTGCTTACCAGCAAAGATCAGCCCTTGCTGATCAGGAGGAATTCCT 2409937 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| || || ||| | ||||||| | ||| | || | Sbjct 2409938 TCCTTATCCTGGATCTTGGCTTTTACATTTTCTATAGTGTCTGAGGGTTCAGCCTCAAGT 2409997 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || || || ||||| || ||||| || Sbjct 2409998 GTGATGGTCTTCCCTGTAAGGGTTTTTACGAAAATCTG 2410035 >seq39 Length=21454635 Score = 109 bits (120), Expect = 1e-18 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 ||||||| ||||| || || || |||||||||| | |||||| |||| |||||| | | Sbjct 17272296 AGTCTCAACACAAGATGAAGGGTGAACTCCTTTTGAATGTTGTAATCAGACAAAGTACGT 17272237 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 ||||||||||| ||||| || || ||||| || | ||||| || || ||||||||| Sbjct 17272236 CCATCTTCCAGTTGCTTACCAGCAAAGATCAGCCTTTGCTGATCAAGAGGAATTCCTTCC 17272177 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 ||||| ||||| || || ||| ||||| | ||| || || | |||| Sbjct 17272176 TTATCCTGGATCTTGGCTTTTACATTTTCTGTTGTGTCCTAGGGTTCAACCTCGAGCGTG 17272117 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || | | ||||| || ||||| || Sbjct 17272116 ATGGTCTTCTCCATAAAGGTTTTTACGAAAATCTG 17272082 >seq41 Length=20498451 Score = 95.1 bits (104), Expect = 3e-14 Identities = 112/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| || || |||||||| |||| |||||||||| || || | ||||||| Sbjct 848201 AGCACCAGGTGCAGGGTGGACTCCTTCTGGATATTGTAGTCAGACAGGGTGCATCCATCT 848260 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| ||||| ||||| || | ||| ||||| || ||||| || || Sbjct 848261 TCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGTTGGTCAGGGGGGATTCCCTCCTTGTCT 848320 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTC 199569 || ||||| ||||| | || | |||||| Sbjct 848321 TGGATCTTGGCCTTCATGTTCTCAATGGTGTC 848352 >seq85 Length=11339561 Score = 89.7 bits (98), Expect = 1e-12 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| || || |||||||| |||| ||||||||| | || || | ||||||| Sbjct 11133872 AGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCATCCATCT 11133931 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| | || ||||| || | ||||||||| | || || | || Sbjct 11133932 TCCAGCTGCTTGCTAGCAAAGATCAGCCTCTGCTGGTCAGTGGGGATGCCCGCCTTGTCT 11133991 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| |||||| || |||||| | | ||| || | | |||| ||| Sbjct 11133992 TGGATCTTGGCCTTCACATTCTCAGTGGTGTCACTGGGTTCAACCTTGAGGATGATGGTC 11134051 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || |||| || ||||| Sbjct 11134052 TTGCCAGTGAGGGTCTTCATGAAGATTTG 11134080 >seq40 Length=22651954 Score = 87.8 bits (96), Expect = 4e-12 Identities = 147/210 (70%), Gaps = 6/210 (3%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| || || ||||| |||| ||||||||||| | ||| | ||||| Sbjct 7366501 AGCACTAGGTGCAGGGTAGACTC----TGGATGTTGTAGTCAGAGAGAGTTCGGCCATCC 7366556 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||||||| || ||||| || || |||||||||||||| || || || || || Sbjct 7366557 TCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCT 7366616 Query 199538 TGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 || || ||| || || || |||| |||||| | | || || || | ||||| || Sbjct 7366617 TGGAT-TTTGGCTTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCGAGGGTGATGGT 7366675 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || || || || ||||| || || || Sbjct 7366676 CTTGCCTGTCAGGGTCTTCACGAAGATCTG 7366705 >seq35 Length=22943593 Score = 87.8 bits (96), Expect = 4e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 199436 GACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCG 199495 ||||||||||| | |||||| |||| ||||| ||||||||||| ||||| || || Sbjct 21587369 GACTCCTTTTGAATGTTGTAATCAGACAAAGCATGTCCATCTTCCACTTGCTTACCAGCA 21587310 Query 199496 AAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACG 199555 || || || ||||| || ||| ||||||||| ||||| ||||| || || Sbjct 21587309 AATATCAGCTTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTCTACA 21587250 Query 199556 GATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTC 199615 ||| | || |||| ||| || || | ||||| ||||| | | |||||||| Sbjct 21587249 TTTTCTATAGTATCTGAGAGTTCAACCTCAAGAGTGATGGTCTTCCTTGCAAGAGTTTTT 21587190 Query 199616 ACAAAAATTTG 199626 |||||||| || Sbjct 21587189 ACAAAAATCTG 21587179 >seq15 Length=34776858 Score = 86.0 bits (94), Expect = 1e-11 Identities = 77/97 (79%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| | || |||||||| |||| | ||||||||| || || | ||||||| Sbjct 23700282 AGCACCAGGTGCAAGGTGGACTCCTTCTGGATGCTGTAGTCAGACAGGGTGCGTCCATCT 23700341 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGT 199514 ||||||||||| | ||| ||||| || | |||||||| Sbjct 23700342 TCCAGCTGCTTGCTGGCAAAGATCAGCCTCTGCTGGT 23700378 Score = 84.2 bits (92), Expect = 5e-11 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 |||||| ||||| || || ||||||| |||| ||||||||||| | || | |||||| Sbjct 23700508 CAGGACCAGGTGCAGGGTGGACTCCTAGTGGATGTTGTAGTCAGATAGGGTGCGTCCATC 23700567 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTG 199512 ||||||||| || ||||| ||||| || | ||| || Sbjct 23700568 TTCCAGCTGTTTGCCGGCAAAGATCAGCCTCTGTTG 23700603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178857721238343