Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterocephalus_20glaber_20[refseq_20GCF_5F000247695.1_202012-02-17] 4,229 sequences; 2,618,204,639 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq26 241 1e-58 seq40 120 3e-22 seq85 116 4e-21 seq148 113 5e-20 seq22 107 2e-18 seq82 95.1 1e-14 seq34 93.3 4e-14 seq135 84.2 2e-11 seq117 84.2 2e-11 >seq26 Length=26652979 Score = 241 bits (266), Expect = 1e-58 Identities = 529/783 (68%), Gaps = 11/783 (1%) Strand=Plus/Plus Query 132724 AGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGA 132783 |||||||| |||||||| |||||||| ||| ||| | ||| || | || | || Sbjct 3407899 AGCCTGTCAGCCACGAATTCGATGTACTGCTTCATTAAATTGCAGTTCATCCCGATGAG- 3407957 Query 132784 CGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATT 132843 | ||| |||| || |||||||| || |||||||| || || | | | | ||| Sbjct 3407958 CTCACAGGCAAGGCCTCGGTGAGGAACTCCTGCTCGATCCTGAAGGCATTGATAATGATC 3408017 Query 132844 TCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAG 132903 ||| | || | | | | || ||||| | ||||||||||||| ||| |||||| Sbjct 3408018 TCCTTCACTCTCTACTCTGAGGGTTTGTGCACAAGGTGCTTGAACATCAGGCAGGCAAAG 3408077 Query 132904 TCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATG 132963 || || |||||||||||||| ||| | | ||| |||| || || | || ||||| Sbjct 3408078 TCACAGTGCAAGCCCTCGTCTCTGCTAGTAAGTCAGTTGGAAAAGGTGAGACCAGGCATT 3408137 Query 132964 AGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCG 133023 | || |||| |||||| | || || | || ||| || |||||||||| || || Sbjct 3408138 ATTCCCTGTTTCTTGAGCAAGAAGATCGACGCAAAAGAACCGGAAAAGAAGATCCCTTCC 3408197 Query 133024 ACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGC 133083 | ||| || || || | || || || || | ||| | |||||| | | ||||||| Sbjct 3408198 ATGGCGGCAAAGGCAAGCACACGTTCTCCATAGGTGACCTCTTTGTCCCCAAGCCAGCGC 3408257 Query 133084 AGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGG 133143 | ||||| || ||||| | || | ||| ||||| || ||||||| | | |||| | Sbjct 3408258 AAGGCCCAGTCCGCCTTCTTCTTCATGCAGGGCATGGTCTCGATGGTGGTAAACAGAAAC 3408317 Query 133144 AGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGT 133203 | | |||| ||| ||||| ||||| || ||| |||||||| || || Sbjct 3408318 TCTCTTTCTTTGGAGTCTTTAACGTAAGTGTCAATAAGGAGACTGTACATTTCAGAATGG 3408377 Query 133204 ACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCT 133263 | || |||||||| ||||| ||||| || || || || || || | ||| |||||| Sbjct 3408378 ATATTTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCT 3408437 Query 133264 TGAGCGAAA-CGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGC 133322 || || ||| ||||| |||||||| ||||||| ||||| |||||||| || || || | Sbjct 3408438 TG-GCTAAATCGCTCCACCAGATTCTCGTTGAGTATGCCATCGCTGGCAGCAAAGAAAGA 3408496 Query 133323 CAGCACGTGCTTGATGAAATGGCGCT-CGTTGTCGTTCAAGCGC-TCCCAGTCGCGCGTG 133380 || || || || |||| | || | | | || || || ||||||| | || Sbjct 3408497 GAGGACATGTGAAATAAAATATCTCTCCCCAGGCTTT--AGTGCTTCCCAGTGCTGAATG 3408554 Query 133381 TCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACATA 133440 || ||||| || |||| |||| | |||||||| || || |||||||| || ||||| Sbjct 3408555 TCTTTGGAAAGATCCA---CCTCAGCCGTCCAAAAGGAGGCTTCGGCTTTCTTATACATC 3408611 Query 133441 CTCCACATGTCCGAATATTGTATGGGAAAAATCACAAACCGGCGGGGGTTTTCGCGCAAC 133500 ||| || | || | || ||||| |||||||| | | |||||| || | || | Sbjct 3408612 TGCCAAATATTGTGGTACTCGATAGGAAAGATCACAAAGCATC-GGGGTTCTCTCTCAGC 3408670 Query 133501 AGC 133503 ||| Sbjct 3408671 AGC 3408673 >seq40 Length=22651954 Score = 120 bits (132), Expect = 3e-22 Identities = 163/227 (72%), Gaps = 4/227 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || ||||| ||||||||| |||| || ||| ||| Sbjct 7366708 ATGCAGATCTTCGTGAAGACCCTGACAGGCAAGACCATCACCCTCGAGGTGGAGCCCAGT 7366649 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | |||| ||||||| ||||| ||||| || ||| | ||||| Sbjct 7366648 GACACCATCGAGAATGTCAAAGCCAAAATCCAAGACAAGGAGGGCATCCCCCCTGACCAG 7366589 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | || |||||||||||||| || | || || ||| ||||||||| Sbjct 7366588 CAGCGTCTGATATTTGCCGGCAAACAGCTGGAGGATGGCCGAACTCTCTCTGACTACAAC 7366529 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| || | || ||||| | ||||| || || |||| || Sbjct 7366528 ATCCA----GAGTCTACCCTGCACCTAGTGCTTCGCCTGCGAGGTGG 7366486 >seq85 Length=11339561 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||| | || || ||||| ||||| ||||||| | || | || || ||| Sbjct 11134083 ATGCAAATCTTCATGAAGACCCTCACTGGCAAGACCATCATCCTCAAGGTTGAACCCAGT 11134024 Query 38304 GACAGCG-TGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | || || | | || | || |||| ||||| | ||| || ||| | ||||| Sbjct 11134023 GACACCACTGAGAATG-TGAAGGCCAAGATCCAAGACAAGGCGGGCATCCCCACTGACCA 11133965 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| |||| || | || |||| |||||||| || | ||||||| ||||||||| Sbjct 11133964 GCAGAGGCTGATCTTTGCTAGCAAGCAGCTGGAAGATGGATGCACCCTGTCCGACTACAA 11133905 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| ||||| | || ||||| ||||||| ||| |||| || || Sbjct 11133904 CATCCAGAAGGAGTCCACCCTGCACCTGGTGCTCCGTCTGAGGGGAGG 11133857 >seq148 Length=4887613 Score = 113 bits (124), Expect = 5e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 ||||||||||| ||||| || || || || ||||| ||||||||| | || || || || Sbjct 4051003 AAAATGCAAATTTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTAGAAGTGGAACCC 4050944 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 | || | | | | | | || | || |||| || ||||| || || || | ||| Sbjct 4050943 AGTGATACCATTGAGAATGTGAAGGCCAAGATCCAGGATAAAGAAGGCATCCCTCCTGAC 4050884 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || ||| ||||||| | || ||||||||||| || || | ||||| || |||||| Sbjct 4050883 CAGCAGAGGCTCATCTTTGCAGGCAAACAGCTTGAAGATGGCCGCACTCTTTCTGACTAC 4050824 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||| || || | || ||||| |||| || || ||||||| || Sbjct 4050823 AACATCCAGAAAGAGTCTACTCTGCACCTGGTCCTTCGCCTGAGAGGTGG 4050774 >seq22 Length=29172479 Score = 107 bits (118), Expect = 2e-18 Identities = 153/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||| | || || || |||||||| |||||||| |||| || ||| ||| Sbjct 11894571 ATGCAGATCTTCCTGAAGACCCTGACGGGCAAGGCCATCACCCTCGAGGTGGAGCCCAGT 11894512 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | |||| ||||||| ||||| ||||| || ||| | ||||| Sbjct 11894511 GACACCACCAAGAATGTCAAAGCCAAAATCCAAGACAAGGAGGGCATCCCCCCTGACCAG 11894452 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACC-CTCAACGACTACAA 38422 ||||| || || | || | |||||||||||| || | || ||| ||| |||||||| Sbjct 11894451 CAGCGTCTGATATTTGCCGACAAACAGCTGGAGGATG-GCAGACCTCTCTCTGACTACAA 11894393 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 |||| | || || | || ||||| ||||||| Sbjct 11894392 CATCTAGAAAGAGTCCACCCTGCACCTGGTGCT 11894360 >seq82 Length=11338420 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||| | || || |||||||| | ||||||||| |||||| || ||| Sbjct 1447335 ATGCAAATCTTCATGAAGACCCTCACGGGTCAGACCATCACCCTCGACGGTGAACCCAGT 1447394 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | || |||| ||||| |||| || || | ||||| Sbjct 1447395 GACACCACTGAGAATATGAAGGCCAAGATCCAAGACAAGGAGGCCATCTCCCCTGACCAG 1447454 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| |||| || | || ||||| || |||| || || | ||||| | |||||||| Sbjct 1447455 CAGAGGCTGATCTTTGCAGGCAAGCAATTGGAAGATGAACACACCCCGTCCAACTACAAC 1447514 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| ||||| | || || || ||||||| || |||| || || Sbjct 1447515 ATCCAGAAGGAGTCCACCCTACACCTGGTGCTCTGTCTGAGGGGAGG 1447561 >seq34 Length=23970518 Score = 93.3 bits (102), Expect = 4e-14 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 132917 CCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTT 132976 ||||||| ||| ||||| |||||| ||| || | ||| ||||||||||| | || | Sbjct 19377071 CCTCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTGAGGCCCGGCATGAGGCCTCTCTTCT 19377130 Query 132977 TGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAG 133036 | ||||| || ||||| || || ||||| ||||| || || || ||||||||||| | Sbjct 19377131 TCAGCCAGAAGATGGCCGCAAAGGACCCCGAGAAGAACACTCCTTCCACGGCCGCGAAGG 19377190 Query 133037 CCACCA 133042 |||||| Sbjct 19377191 CCACCA 19377196 >seq135 Length=5576972 Score = 84.2 bits (92), Expect = 2e-11 Identities = 171/248 (69%), Gaps = 7/248 (3%) Strand=Plus/Minus Query 133189 TACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCG 133248 |||||||| || || | ||| |||||||| ||||| ||||| ||||| | | || || Sbjct 5108973 TACATTTCAGAATGGAGGTTTTCCATGGCAATTTGGAAGCCATAAAAAGAGTGGGCTTCT 5108914 Query 133249 ACCACCTGCACTTCTTGAGCGAAACGC-TCGACCAGATTTTCGTTGACGATGCCGTCGCT 133307 || || |||||| | | ||| | || | || || || |||| ||||| | ||| Sbjct 5108913 GTAACTTGAACTTCTGG--CTAAATTCCTCCATGAGGTTCTCCCTGACTATGCCATTGCT 5108856 Query 133308 GGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGT-TGTCGTTCAAGCGCT 133366 ||| || | | ||||| || ||| || |||| | || | || | || || ||| Sbjct 5108855 GGCAGCAGAGCAAGCCAGGACATGCCAAATAAAATCTCTCTTATCTGGCTTT--AGTGCT 5108798 Query 133367 -CCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCG 133425 ||||| | |||| ||||| || |||| |||||| | |||||||| || |||||| Sbjct 5108797 TCCCAGGGCCCAATGTCTTTGGAAAGATCCATCTCCTCAGCCGTCCAAAAGGAGGCCTCG 5108738 Query 133426 GCTTTTTT 133433 ||||| || Sbjct 5108737 GCTTTCTT 5108730 >seq117 Length=6347111 Score = 84.2 bits (92), Expect = 2e-11 Identities = 153/224 (68%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 ||||||||||| ||| | || || || || ||||| |||||||| | || || || || Sbjct 1553979 AAAATGCAAATCTTCATGAAGACCCTGACTGGCAAGACCATCACTCTGGAAGTGGAACCC 1554038 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 | || | | | | | | || | || |||| || ||||| || || || | ||| Sbjct 1554039 AGTGATACCATTGAGAATGTAAAGGCCAAGATCCAGGATAAAGAAGGCATCCCTCCTGAC 1554098 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || ||| ||||||| | | ||||| |||||||| || | | ||| || |||||| Sbjct 1554099 CACCAGAGGCTCATCTTTACAGGCAAGCAGCTGGAAGATGGCCACACTCTTTCTGACTAC 1554158 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAG 38464 ||||| || ||||| | || ||||| | || || | | |||| Sbjct 1554159 AACATTCAGAAGGAGTCCACTCTGCACCTTGTCCTCCATCTGAG 1554202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500146359615360