Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterocephalus_20glaber_20[refseq_20GCF_5F000247695.1_202012-02-17] 4,229 sequences; 2,618,204,639 total letters Query= NC_018284.1 Length=42123 Score E Sequences producing significant alignments: (Bits) Value seq371 475 9e-130 >seq371 Length=40469 Score = 475 bits (526), Expect = 9e-130 Identities = 776/1111 (70%), Gaps = 40/1111 (4%) Strand=Plus/Minus Query 31936 AATAATGACTAACTTAACAATTTTGACAGGACGTATCACTAAAGATTTAGAACTTAAACA 31995 |||||||| | |||||||| || || ||||| ||||| ||||| |||||||| ||| | Sbjct 4517 AATAATGAAT---TTAACAATCTTAACGGGACGAATCACAAAAGACTTAGAACTAAAAGA 4461 Query 31996 AGCAGGACAAACACAAGTAACTAACTTCTCTATGGCAGTGGACAATCCATTCAAAAAAGA 32055 ||||| ||||||||||||| ||||| || | || || || || ||||| |||||||| Sbjct 4460 TGCAGGTAAAACACAAGTAACAAACTTTTCATTAGCGGTAGATAACCCATTTAAAAAAGA 4401 Query 32056 TGATACATCATTCTTTGACATCGTAGCGTTTGGCAAAACTGCCCAACTATTAAACGACTA 32115 ||| ||||||||| || || ||||| ||||| ||||| || |||||||||| |||| Sbjct 4400 TGACGTATCATTCTTCGATATTGTAGCTTTTGGTAAAACAGCAGAACTATTAAATAACTA 4341 Query 32116 TTGCGGTAAGGGAAGCAAAGTTTTAATCGAAGGCAACTTGAAGCAAGACCGTTTCCAAGA 32175 ||||||||| || |||||| || || || ||||| || || ||||| |||||| | || Sbjct 4340 TTGCGGTAAAGGTAGCAAAATTGGCATTGAGGGCAATTTAAAACAAGATCGTTTCGAGGA 4281 Query 32176 TAAAGAAGGTAACAATCGTTCAGTAGTACGAGTGATTGCAAATAGAATTGAATTCTTAGA 32235 ||||||||||||||| |||||||| || |||| || || ||| | ||||||| ||||| Sbjct 4280 TAAAGAAGGTAACAAACGTTCAGTTGTTAGAGTAATCGCGAATCGTGTTGAATTTTTAGA 4221 Query 32236 TAGCAAAGGTAGTAAC-CAGCAAAACAATCAACCTCAACAACAAAGAGGACAAGCGCCAG 32294 || |||| | | | | || || ||| ||| || |||| |||||| | | Sbjct 4220 TA-CAAAAGAACAATCTCAACAGAACGGACAAACTAAACA---------GCAAGCGTCTG 4171 Query 32295 CAGGCAATAACCCGTTTGCAAATGATAATGGT--ATCAA-TGATATTTCGGAATCGGAGC 32351 | || || ||| |||| ||| ||| | ||| ||||||| || || Sbjct 4170 ------AGAATCCTTTTAATAATGCTAACGGTGGACCAATTGATATTCAAGATGACGATT 4117 Query 32352 TTCCTTTCTGATTGGACTGATTAGATGGTAGTAATAAAAAACTACATTACAGAAGATGAC 32411 | || |||| | || |||||| |||| ||||||||||||||||| | || |||| Sbjct 4116 TACCGTTCTAA--GGTGTGATTATATGGCGGTAATAAAAAACTACATCCAACAAAATGAT 4059 Query 32412 GGTACAACGACTGTAGTCATCAAAGGAGTAGAACTAGATAACAAAACATCATTGCTTTTA 32471 || |||| |||| ||||| | || ||| ||| ||||||| | || || | Sbjct 4058 GGCACAATAACTGCCGTCATTGAGGGTGTAACACTTACTAACAAAGACTTTTTACTACTT 3999 Query 32472 GACAACGGTTACGAAGTAGAAGTAGATGTAAGAGTTGTAGATCCATTCAAGATTACAGAT 32531 || ||||| | ||||| ||| ||||| ||| || || |||| ||| || || ||| Sbjct 3998 GATAACGGATTAGAAGTTGAATGCAATGTAGCAGTCGTTGACCCATACAAAATAACTGAT 3939 Query 32532 AAGCAGCGTAGAAAAATATTTGCTCTCTGT-AACGACATAGAAGCACATACAGGACAACC 32590 ||||| ||||||||| |||| ||||| ||| ||||| |||||||| |||||||| || Sbjct 3938 AAGCAACGTAGAAAAGTATTCGCTCT-TGTGAACGATATAGAAGCTCATACAGGCACGCC 3880 Query 32591 CCGTAACTATATGAGGTATATGTTCATGGATTACGTAGAAGTCCTCTACGGCTATGAAAA 32650 | | ||||||||| || | ||| || || ||| || || |||||||| || | Sbjct 3879 ACAAGATTATATGAGGAATGTATTCCAAGAATATGTACGTGTGCTATACGGCTACGATGA 3820 Query 32651 GCGCCTCTCATTGAGCGACTGCACAAGAGAACAAGCTANNNNNNNNNNNNNNNNNNNTCT 32710 |||| | ||| | || || | || || || | | Sbjct 3819 GCGCATATCACTTGCTGATTGTTCTAGGAAAGTGGCAAGTCAAATTATAGATGTAGCAAT 3760 Query 32711 CGACTGGGTGTTTCACAACAATATACCACTTAATTATAAGACGAGTGACTTACTCAAAAA 32770 || ||| | || | ||||| || || || | ||||| || ||||| || |||| || Sbjct 3759 TGAATGGATATTCGAGAACAACATCCCGCTCAGATATAAAACAAGTGATCTAATCAAGAA 3700 Query 32771 TGATAAAGCGTTCCTTTAT---TGGTCAACGGTCAATCGTAACTGTGTAATATGCGGAAC 32827 ||| | | |||| ||||| ||| | || |||| | || || || || || || | Sbjct 3699 TGACAGAACGTT--TTTATACATGG-CTACTATCAAGAGAAAGTGCGTTATCTGTGGCA- 3644 Query 32828 ACCACATGCCGAACTTGCACATTATCACGCAGTAGGTCGAGGACGTAATAGACGAAAGAT 32887 ||||| || || ||||||||||| ||||||||||| ||||| || ||||| ||||| Sbjct 3643 --AGCATGCAGAGCTAGCACATTATCAAGCAGTAGGTCGTGGACGCAACAGACGCAAGAT 3586 Query 32888 AGATCACACAGACAACAAAGTATTAGCGCTATGTTCAAGACATCATAAAGAGCAGCACCA 32947 ||| || ||||||||||||||| |||||||| |||||||||||||| ||| | Sbjct 3585 AGAACATTTTAACAACAAAGTATTAGGACTATGTTCCTTTCATCATAAAGAGCAACACGA 3526 Query 32948 AATAGGTATAGATAGTTTTAATGAGAAATACAAATTACATGAAAGT--TGGGTGTCCGTA 33005 || || || |||||||| ||| |||| || | ||| | ||| | |||||| ||| Sbjct 3525 CATGGGCATGGATAGTTTCAATAAGAAGTATCATTTAGA--AAATTCATGGGTGGACGTT 3468 Query 33006 GATGAAAGACTCAACCGAATGTTGAAAGGAG 33036 || || ||||| ||| |||| ||||||||| Sbjct 3467 GACGAGAGACTAAACAAAATGCTGAAAGGAG 3437 Score = 461 bits (510), Expect = 2e-125 Identities = 858/1258 (68%), Gaps = 14/1258 (1%) Strand=Plus/Minus Query 34208 ATGAAATCGAAAGTACAATCGTTGCTAGTTTACTTCAAAAACCGGACATAATTGAGAAGT 34267 ||||||| |||||||| || | |||||| || | || ||||| ||| | | ||||||| Sbjct 2365 ATGAAATTGAAAGTACTGTCATCGCTAGTCTATTACAGAAACCTGACTTGCTAGAGAAGT 2306 Query 34268 TACGTGTGAGACCGGAAATGTTCTCACATGATGGTATGAAGTCATTTATGGAATATGTAT 34327 || | | | ||| | |||||| | |||| | | || |||||| | || | | Sbjct 2305 TAAGAATTAAACCATACATGTTCCAAGATGAACATTTTAAAGAGTTTATGAATTACATCT 2246 Query 34328 TCGAAGTCGGTAAGGTAGATCATAACGAAATCTATTTAAAAACCACAAAAGATAAGTCAT 34387 | || || ||||| ||| ||||| || ||| | || | || || || |||| Sbjct 2245 TAGATCAAGGAAAGGTTGATTTGAACGAGATATATCTCAAGAGTGTGAAGGACAAATCAT 2186 Query 34388 TCCTAGATATGGACACCATTTCAAATTTGTATAACTCAAAATTTATAGGTTACGGATTCT 34447 || || || || ||| | || || |||||||| || ||||| || |||||||||| Sbjct 2185 TCTTAAGTAACGATGTAATTACTAAATTATATAACTCTAATTTTATTGGCTACGGATTCT 2126 Query 34448 TTGAAAGATATCAACAAGATTTGCTCAATCTTTATCAAAT----AGAGCGTACGCAAAAC 34503 |||| ||||||||||||||||| | | |||||||| | |||| | | ||| Sbjct 2125 TTGAGAGATATCAACAAGATTTATTACAAAACTATCAAATTATTAAAGCGAATG---AAC 2069 Query 34504 GTATTACAAGAATTCAATTCTGACCCGAATATAC---AAAATTTTGATGAAATGCTTAAC 34560 || | | || || | | | || || ||| |||| |||||||| || | Sbjct 2068 TTACTGATAATTTTAAACAATTATC----TACACCTGAAACTTTTAATGAAATGGTTGAG 2013 Query 34561 AAACTACAAAAGGTCAGTTTAATTAGTGCAAGTGAAGAAAGTGGGACTaaaaaaaTTGTA 34620 ||||| || || | | | || | | | |||| ||| ||| || | || Sbjct 2012 AAACTTAAAGAGTTAACTAATATCACAACCAAAAAAGAGGATGGCACTCAACGATATGCT 1953 Query 34621 GATCACTTTGTCGAAGAATTATATAGCGAAGAACCAAAACAAAAAATCAATACAGGTTAT 34680 | || || || || || |||||||| || ||||| |||| | | || || ||| Sbjct 1952 AAACAATTAGTTGAGGATTTATATAGTGATGAACCTGTGCAAAGAGTAAAAACCAAATAT 1893 Query 34681 AAACTGGTGGATTACAAAATAGGTGGTTTAGAACCTACACAGTTGATTGTAATCGCTGCG 34740 ||||| |||| || ||||| |||||||| || || | || ||||| ||||| ||||| Sbjct 1892 AAACTCATGGACTATAAAATCGGTGGTTTTGAGCCAAGTCAATTGATAGTAATTGCTGCT 1833 Query 34741 AGACCGTCAGTAGGTAAAACGGGGTTTGCGCTTAATATGATGCTTAATATAGCGTCTCAA 34800 | || || ||||| || || ||||| | ||||||||| || || || ||| Sbjct 1832 CGTCCAAGTGTCGGTAAGACTGGATTTGCATTAAATATGATGTGGAACATTGCAAAACAA 1773 Query 34801 GGCTATAAAACTTCATTCTTCAGTCTAGAGACAACTGGCGTGTCTGTATTGAAAAGGATG 34860 ||| | |||| |||||||| ||| | || |||||||| | || |||| || Sbjct 1772 GGCCACCAAACATCATTCTTTAGTATTGAAACAACTGGAAAAAACATCTTACAAAGATTG 1713 Query 34861 TTATCAGCAGAAACTGGGATAGAACTAACTCGTATCAAAGAAATTAAAGATTTAGAACCG 34920 |||| | ||||| || || ||| ||||| ||| | || |||| | || Sbjct 1712 CTATCTACTATCACTGGTATCGAGTTAAACCGTATTAAAAATGTTCAAGACCTGACGCCA 1653 Query 34921 GATGAATTAACACGTTTAACAACTGCAGCAGACAAAATACTCAAACTTGATATAGATATA 34980 |||||||||| ||||||| ||| ||| ||||||| ||| | | |||| | || Sbjct 1652 AATGAATTAACTGATTTAACAGGTGCTATAGATCAAATACTTAAATTAGGTATAAACATT 1593 Query 34981 CACGATAAAAGTAATATTACTACACATGATGTACGTAAACAAGCGATGAAAAACAAAGAT 35040 | || | || | | || |||| || | | |||||||||||| | | || Sbjct 1592 AATGACGATAGCACAACAACACCACAAGACATTAGAGCACAAGCGATGAAGCATAGTGAC 1533 Query 35041 GTGCAACAGGTTATCTTCATTGACTACTTACAACTTATGCAGACAGACAGTAAGTTAGAT 35100 | ||| ||||| || ||||| ||| | ||| | ||| | ||||| | ||| | ||| Sbjct 1532 AAACCACAAGTTATATTTATTGATTACCTTCAATTAATGGAAACAGATACTAATGTTGAT 1473 Query 35101 CGTCGTAATGGTATCGAAAAGATATCGCGAGATTTGAAGATTATTGCAAATGAAACAGGT 35160 | || || | ||||||||||| || || ||||| || || |||||||||||||| Sbjct 1472 AGACGCGTTGCAGTTGAAAAGATATCACGCGACTTGAAAATCATAGCAAATGAAACAGGA 1413 Query 35161 GCAATTATTGTGTTGCTATCTCAATTGAGCAGAGGTGTAGAAACAAGAAATGACAAAAGA 35220 |||||||| || | || |||||||||| | || || ||| ||||||| || ||| | Sbjct 1412 GCAATTATAGTAGTTCTTTCTCAATTGAATCGTGGAGTTGAATCAAGAAACGATAAACGT 1353 Query 35221 CCTATGCTATCTGACATGAAAGAAGCAGGTGGAATTGAAGCAGATGCAAGTTTAGCTATG 35280 || ||| |||| ||||||||||| ||||||||||||||||||| |||||| | || ||| Sbjct 1352 CCGATGTTATCAGACATGAAAGAGTCAGGTGGAATTGAAGCAGACGCAAGTATGGCGATG 1293 Query 35281 TTGTTATATCGAGATGATTACTACAACCGTGATGATGTTGATGACTCAGGCAAGTCAATT 35340 |||| ||| |||||||||||||| | | ||||| | ||||| || || || || || Sbjct 1292 ATGTTGTATAGAGATGATTACTACGAACAAGATGAAGCAGATGAATCTGGTAAATCTATC 1233 Query 35341 GTTGAATGTAACATCGCAAAGAATAAAGACGGAGAAACAGGTGTAGTTGAGTTTGAGTAT 35400 ||||||||||| || || ||||| ||||| || ||||| ||||| |||| ||||| | | Sbjct 1232 GTTGAATGTAATATAGCCAAGAACAAAGATGGTGAAACTGGTGTTATTGAATTTGAATTT 1173 Query 35401 TACAAGAAAACGCAGAGGTTCTTCACATGAAAGTAGTTGAATATCAAAAGTTGTTAGG 35458 ||||||||||| |||||||| ||||||||| |||| ||| |||| || | |||| Sbjct 1172 TACAAGAAAACACAGAGGTTTTTCACATGAGTGTAGCACAATTTCAACAGCTACTAGG 1115 Score = 86.0 bits (94), Expect = 2e-12 Identities = 306/473 (65%), Gaps = 9/473 (2%) Strand=Plus/Minus Query 16435 AATGCAGAAGTAGATATTAGATTATTTGGCGGAGATAATAGACCTTCAAGA--GTTAT-- 16490 |||||| | |||||| | | | | || || ||||||||||| |||| |||| Sbjct 21873 AATGCAAGTGAAGATATAAAAATTATGGGTGGTAATAATAGACCT--AAGAACGTTACGA 21816 Query 16491 TTTAAACAATATCAATATTTGGAATTCATCTAACAATATCGGTATCGGTGTTGGAAGTAA 16550 ||| || || | ||||||||||| |||||||| ||||| | |||||||| || ||| Sbjct 21815 TTTCAA--ATTTGAATATTTGGAACTCATCTAAGAATATTGCTATCGGTGGCGGTTCTAA 21758 Query 16551 AATATACGATACTAAAATAACTAATTGTAACTTACACGGTAATGGTTCGGGCATAGGATT 16610 | | || || |||| ||| | ||| |||||| || |||||||| | || | ||| | Sbjct 21757 AGTTTATGACACTAGAATTATAAATGCTAACTTGCAAGGTAATGGCACTGGAACAGGTGT 21698 Query 16611 ACGTTTGACAAATAACCACGCTATGATTAGTGGTATCACAGCAAACAATTATTCAACACC 16670 | | || | |||| || ||| |||| | ||| | ||| | | | Sbjct 21697 ATTTATGTATAGTAACACTGCGGAACTTATTGGTGTTCAAGCTACAGGATATACTAATGC 21638 Query 16671 TGCATGGATAGCCGGCGAAAAATACGACACACCTCCTACAGTTGGAAAAGGTGGTGCTAG 16730 ||| || || || | ||||| | | | |||| || |||| |||||| || || Sbjct 21637 GGCAGACATTGCAGGTAAGAAATATAATAAAGCTCCAACTGTTGTAAAAGGCGGATTCAG 21578 Query 16731 TATAGCGTCTACAGGAAGTGCAGGCGTAGCTAATGCTAGTGCAGTTATTGCGTCAACAGG 16790 | || |||||||| |||| || || | | ||| |||||||| || ||||| Sbjct 21577 TGCAGGCTCTACAGGTTCAGCAGCAGTTGCAGAACGTTCTGCGGTTATTGCTTCCACAGG 21518 Query 16791 TGGTTCGAAAGCATACAGTAATCGTAGCTTTGTATTAGGTTCTGGTGCTAACTCCAAATC 16850 | | | || | ||| || | || | | ||| | ||| ||||| ||| Sbjct 21517 TAATACTTTTGCTTTTAGTGATAGAAGTTGGGCTGCAGGAACAGGTATGAACTCGAAAGT 21458 Query 16851 TTATGGATCACGTAGTGGTATTATCAACTCGTTAAATTCAGAAAC-AGACAAG 16902 ||||| |||||||| | || |||||||| ||| | |||||||| | ||||| Sbjct 21457 GTATGGGTCACGTAGCGCGATAATCAACTCATTAGAATCAGAAACGACACAAG 21405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 134665236856330