Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heterocephalus_20glaber_20[refseq_20GCF_5F000247695.1_202012-02-17]
4,229 sequences; 2,618,204,639 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq148 84.2 3e-11
>seq148
Length=4887613
Score = 84.2 bits (92), Expect = 3e-11
Identities = 141/204 (69%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
|||||| || ||| | || || ||||||| || || || || | ||||| |||
Sbjct 4050773 AATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTGGAAGTGGAACCCAG 4050714
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
||||| ||| || || || || || || |||||||||||||| ||||| || ||
Sbjct 4050713 TGATACCATTGAGAATGTAAAGGCCAAGATCCAGGATAAAGAAGGCATCCCTCCCGACCA 4050654
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001
|| || | || | ||| || |||||||| |||||| | | ||| | || ||||| ||
Sbjct 4050653 GCAGAGGCTCATCTTTGCAGGCAAGCAGCTTGAAGATGGCCGCACTCTTTCTGATTACAA 4050594
Query 156002 TATATCCAAAGAGGCGACGCTTCA 156025
||| |||||| | || || ||
Sbjct 4050593 TATCCAGAAAGAGTCCACTCTGCA 4050570
Score = 84.2 bits (92), Expect = 3e-11
Identities = 142/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879
||||||||||| || | || || ||||||| || || || || ||||||| |||
Sbjct 4051003 AAAATGCAAATTTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTAGAAGTGGAACCC 4050944
Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939
||||| ||| || ||||| || || || |||||||||||||| ||||| ||
Sbjct 4050943 AGTGATACCATTGAGAATGTGAAGGCCAAGATCCAGGATAAAGAAGGCATCCCTCCTGAC 4050884
Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999
|| || || | || | ||| || || ||||| |||||| | | ||| | || || ||
Sbjct 4050883 CAGCAGAGGCTCATCTTTGCAGGCAAACAGCTTGAAGATGGCCGCACTCTTTCTGACTAC 4050824
Query 156000 AATATATCCAAAGAGGCGACGCTTCA 156025
|| || |||||| | || || ||
Sbjct 4050823 AACATCCAGAAAGAGTCTACTCTGCA 4050798
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731833311416400
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |