Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterocephalus_20glaber_20[refseq_20GCF_5F000247695.1_202012-02-17] 4,229 sequences; 2,618,204,639 total letters Query= NC_021326.1 Length=45242 Score E Sequences producing significant alignments: (Bits) Value seq371 255 2e-63 >seq371 Length=40469 Score = 255 bits (282), Expect = 2e-63 Identities = 324/441 (73%), Gaps = 16/441 (4%) Strand=Plus/Plus Query 32295 ATCACTTCATTTCTCTTTTGCGTTCTCGTCTTGCTTTAATTAATTCCTCGTAAGTAATCC 32354 ||||| || | || | |||||||| ||||| | || | ||||| || || || | || Sbjct 344 ATCACCTCTTAGCTTTCTTGCGTTCGCGTCTCACCTTGTTCAATTCTTCATACGTTACCC 403 Query 32355 ATGTTTTGCCTGTGTACTTAGGTGCTTTACATATCCAATTGAGTTTTATGTTTCTGTATT 32414 | ||| |||||||||||||||||||||||||||||| | ||||||| || ||| Sbjct 404 AGTCTTTACCTGTGTACTTAGGTGCTTTACATATCCAAGTAAGTTTTACATTGGGATATA 463 Query 32415 TATGTCTGAAAATCTTAGCTTTAAGTTTTGCTACTTCGGTTGGCATACCTTTAATGTCGA 32474 || ||| || | ||| || || | || || ||| || | ||| ||||||| ||| | Sbjct 464 GATATCTAAATAACTTCGCCTTTAACTTAGCCGTTTCTGTCGCCATGCCTTTAACGTCTA 523 Query 32475 TAACTTCAATCAGTTTGTCATCGAGATATAACGCGAAGTCTGCAATATATTCAATCTTTC 32534 | |||||||||| ||||| | ||| || |||||||||||||||||| | || | Sbjct 524 TGACTTCAATCAACTTGTCGTTATTCCATAGTGCAAAGTCTGCAATATATTCAGTTTTAC 583 Query 32535 GTTGTTTATCTAGTTTTGGTAATAATTCGAATTTCGGTTGTATTTCGATATGATCATAAT 32594 |||||||| | | ||| |||| || || || |||||||||| ||||||| |||||| Sbjct 584 GTTGTTTACCAAATTTAGGTATTAGCTCATATCTCGGTTGTATCTCGATATAGTCATAA- 642 Query 32595 TAGTGCCATTCAT-ATTACT-----TTCTAAATATTGGTAATATTCACACTCTACTTTGC 32648 |||| || |||| | |||||| || | ||| || ||||| || ||||||| Sbjct 643 -----CCATCTATAATTAATCGTTGTTCTAAGTACTTGTAGTAATCACATTCAACTTTGC 697 Query 32649 TATCAAATACAATTCCTTTGTACTCAACTTTCTTAGCATTGTATTTACTC-ATTGCGCCA 32707 |||| || || ||||| |||||||||||||| ||||||||||||||| | ||||||| Sbjct 698 TATCGAACGTTATACCTTTATACTCAACTTTCTTTGCATTGTATTTACTCAAGTGCGCCA 757 Query 32708 --CCTCTAA-ATATCAAATAT 32725 ||| ||| | ||||||||| Sbjct 758 CTCCTATAAGAAATCAAATAT 778 Score = 98.7 bits (108), Expect = 3e-16 Identities = 182/264 (69%), Gaps = 5/264 (2%) Strand=Plus/Plus Query 35688 TTTCTCTCCTTTCAACATTTTGTTTAATCTTCCATCAACTTTTAGCCACGAGTCATGCAA 35747 |||| ||||||||| ||||||||||| ||| | ||||| | | ||| || | | || Sbjct 3432 TTTCACTCCTTTCAGCATTTTGTTTAGTCTCTCGTCAACGTCCACCCATGAATTTTCTAA 3491 Query 35748 GTGATATTTATCA-TCAAACGACTTAACGCCCATCGCATGTTGCTGGTTGTGATGTTCAC 35806 ||||| || | | | |||| | | | |||||| | ||||||| || ||||| Sbjct 3492 ATGATACTTCTTATTGAAACTA-TCCATGCCCATGTCGTGTTGCTCTTTATGATGAAAGG 3550 Query 35807 GACATAACGCTAATACATGTTTGTCATAGTGATTCATCTTATTTCTGTTCATGCCTCTGC 35866 ||||| ||||||| | |||| | | || | ||||| |||||| || | | Sbjct 3551 AACATAGTCCTAATACTTTGTTGTTAAAATGTTCTATCTTGCGTCTGTTGCGTCCACGAC 3610 Query 35867 CGACTGCTTCATAATGTGCTAGGTCTGCGTGAGGCTTTCCGCAAATTACACAGTTGCGGT 35926 | ||||||| |||||||||||| ||||| | |||| || || || || || || | | Sbjct 3611 CTACTGCTTGATAATGTGCTAGCTCTGC---ATGCTTGCCACAGATAACGCACTTTCTCT 3667 Query 35927 TGATTGTAGCCCAATATAATAACG 35950 |||| |||||| ||||| |||| Sbjct 3668 TGATAGTAGCCATGTATAAAAACG 3691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144645535626792