Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterocephalus_20glaber_20[refseq_20GCF_5F000247695.1_202012-02-17] 4,229 sequences; 2,618,204,639 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq16 158 1e-33 seq126 118 1e-21 seq39 116 3e-21 seq40 100 3e-16 seq148 95.1 1e-14 seq22 91.5 1e-13 seq41 87.8 2e-12 seq35 86.0 6e-12 seq15 84.2 2e-11 seq85 82.4 7e-11 seq12 82.4 7e-11 >seq16 Length=31725842 Score = 158 bits (174), Expect = 1e-33 Identities = 174/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| ||| | ||||| || || || || || || |||||||| || ||| || | Sbjct 21647252 GATGCAGATTTTTGTAAAAACTCTTACGGGGAAGACCATCACGCTCGAGGTTGAACCCTC 21647193 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| |||||| |||||| |||||||| || || |||||||| ||||| ||||| Sbjct 21647192 AGACACTATAGAAAATGTAAAAGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCA 21647133 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACAT-GTCAGATTATA 24881 ||| | |||||||||| || || || ||||| ||| ||| || | ||| ||||| | Sbjct 21647132 GCAAAGGCTGATCTTTGCTGGTAAGCAACTGGAAGATG-GAGGTACTTTGTCTGATTACA 21647074 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||||||||||| || || || || | |||||| |||| || || || Sbjct 21647073 ACATTCAAAAGGAGTCCACCCTTCATCTTGTGTTGAGATTCCGTGGTGG 21647025 >seq126 Length=6421402 Score = 118 bits (130), Expect = 1e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 24695 ATTGATACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTA 24754 |||| | ||||||||| || | ||||| || || || || || || || || || | Sbjct 2410047 ATTGCCAAGATGCAGATTTTCGTAAAAACCCTTACAGGGAAGACCATCACACTTGAGGCT 2409988 Query 24755 GAAGCCACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCT 24814 ||| || | ||||| |||||| |||||| |||||||| || || |||||||| ||| Sbjct 2409987 GAACCCTCAGACACTATAGAAAATGTAAAAGCCAAGATCCAGGATAAGGAAGGAATTCCT 2409928 Query 24815 CCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCA 24874 || ||||| ||| | |||||||||| || || || ||||| || | | |||| Sbjct 2409927 CCTGATCAGCAAGGGCTGATCTTTGCTGGTAAGCAACTGGAACATGGACGTACTTTGTCG 2409868 Query 24875 GATTATAACATTCAAAAGGAATC 24897 ||||| |||||||||||||| || Sbjct 2409867 GATTACAACATTCAAAAGGAGTC 2409845 >seq39 Length=21454635 Score = 116 bits (128), Expect = 3e-21 Identities = 156/217 (72%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| || | ||||| | | | || || || |||||||| || ||| || Sbjct 17272078 GATGCAGATTTTCGTAAAAACCTTTATGGAGAAGACCATCACGCTCGAGGTTGAACCCTA 17272137 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| ||||| |||||| |||||||| || || |||||||| |||| ||||| Sbjct 17272138 GGACACAACAGAAAATGTAAAAGCCAAGATCCAGGATAAGGAAGGAATTCCTCTTGATCA 17272197 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| | |||||||||| || || || ||||| ||| | | |||| ||||| || Sbjct 17272198 GCAAAGGCTGATCTTTGCTGGTAAGCAACTGGAAGATGGACGTACTTTGTCTGATTACAA 17272257 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGA 24919 |||||||||||| | || || || | |||||| || Sbjct 17272258 CATTCAAAAGGAGTTCACCCTTCATCTTGTGTTGAGA 17272294 >seq40 Length=22651954 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 4/228 (2%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || || || || || || || || ||||| || || ||| Sbjct 7366709 GATGCAGATCTTCGTGAAGACCCTGACAGGCAAGACCATCACCCTCGAGGTGGAGCCCAG 7366650 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || ||| || ||||||||||| || || || || || || || Sbjct 7366649 TGACACCATCGAGAATGTCAAAGCCAAAATCCAAGACAAGGAGGGCATCCCCCCTGACCA 7366590 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| |||| |||||||| ||||||||||||||| ||| | || || || || Sbjct 7366589 GCAGCGTCTGATATTTGCCGGCAAACAGCTGGAGGATGGCCGAACTCTCTCTGACTACAA 7366530 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| || || || || || ||| | ||| | || |||| || || Sbjct 7366529 CATCCA----GAGTCTACCCTGCACCTAGTGCTTCGCCTGCGAGGTGG 7366486 >seq148 Length=4887613 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || || || || || || || || ||||| ||| ||| Sbjct 4050772 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTGGAAGTGGAACCCAGT 4050713 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | ||||| |||||||| || |||||||| || |||||||| || Sbjct 4050712 GATACCATTGAGAATGTAAAGGCCAAGATCCAGGATAAAGAAGGCATCCCTCCCGACCAG 4050653 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | | |||||||| || || ||||| || ||| | | | || ||||| || Sbjct 4050652 CAGAGGCTCATCTTTGCAGGCAAGCAGCTTGAAGATGGCCGCACTCTTTCTGATTACAAT 4050593 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 || || || || || || || ||| |||| |||| Sbjct 4050592 ATCCAGAAAGAGTCCACTCTGCACCTGGTCCTGCG 4050558 >seq22 Length=29172479 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/212 (70%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || || || || || | || || ||||| || || ||| Sbjct 11894572 GATGCAGATCTTCCTGAAGACCCTGACGGGCAAGGCCATCACCCTCGAGGTGGAGCCCAG 11894513 Query 24763 CGACAC-AGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 ||||| | | || | ||| | ||| ||||||||||| || || || || || || | Sbjct 11894512 TGACACCACCAAGAATGTCAAAGCCAAA-ATCCAAGACAAGGAGGGCATCCCCCCTGACC 11894454 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881 | || ||| |||| ||||||| ||||||||||||||| ||| | || || || | Sbjct 11894453 AGCAGCGTCTGATATTTGCCGACAAACAGCTGGAGGATGGCAGACCTCTCTCTGACTACA 11894394 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTG 24913 |||| | || || || || || ||| ||||| Sbjct 11894393 ACATCTAGAAAGAGTCCACCCTGCACCTGGTG 11894362 >seq41 Length=20498451 Score = 87.8 bits (96), Expect = 2e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 |||||||||||||| || ||||| || || || ||||| | ||||||||||||| || Sbjct 848328 AAGATCCAAGACAAGGAGGGAATCCCCCCTGACCAACAGAGGCTGATCTTTGCCGGCAAG 848269 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 |||||||| ||| | | | |||| || || || || || ||||| || || || ||| Sbjct 848268 CAGCTGGAAGATGGATGCACCCTGTCTGACTACAATATCCAGAAGGAGTCCACCCTGCAC 848209 Query 24908 TTGGTG 24913 ||||| Sbjct 848208 CTGGTG 848203 >seq35 Length=22943593 Score = 86.0 bits (94), Expect = 6e-12 Identities = 138/196 (70%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||| ||||| ||| | ||||| || | | || || || || || || || ||| | | Sbjct 21587175 GATACAGATTTTTGTAAAAACTCTTGCAAGGAAGACCATCACTCTTGAGGTTGAACTCTC 21587234 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || |||||| ||| | |||||||| || || |||||||| ||||| ||||| Sbjct 21587235 AGATACTATAGAAAATGTAGAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCA 21587294 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACAT-GTCAGATTATA 24881 ||| |||| ||||| || || || |||| ||| || | | | ||| ||||| | Sbjct 21587295 GCAAAAGCTGATATTTGCTGGTAAGCAAGTGGAAGATG-GACATGCTTTGTCTGATTACA 21587353 Query 24882 ACATTCAAAAGGAATC 24897 ||||||||||||| || Sbjct 21587354 ACATTCAAAAGGAGTC 21587369 >seq15 Length=34776858 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/211 (69%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||| ||||| || || || || || || || | || || |||||||||||| ||| Sbjct 23700493 GATGCAAATCTTCATGAAGACCCTTACTGGCAACATCATCACCCTCGAAGTAGAACCCAG 23700434 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | | | || || |||||||||||||| || | || || ||| | || Sbjct 23700433 TGAAACCATTCAGAATGTCAAGGCCAAGATCCAAGACAAGGAGAGCATCCC-CCCAACCA 23700375 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | ||||||||||| | || |||||||| ||| | | | |||| || || | Sbjct 23700374 GCAGAGGCTGATCTTTGCCAGCAAGCAGCTGGAAGATGGACGCACCCTGTCTGACTACAG 23700315 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTG 24913 ||| || ||||| || || | ||| ||||| Sbjct 23700314 CATCCAGAAGGAGTCCACCTTGCACCTGGTG 23700284 >seq85 Length=11339561 Score = 82.4 bits (90), Expect = 7e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||| ||||| || || || || || || || || || | ||| | || ||| ||| Sbjct 11134084 GATGCAAATCTTCATGAAGACCCTCACTGGCAAGACCATCATCCTCAAGGTTGAACCCAG 11134025 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| || | || || |||||||||||||| | || || || | || || Sbjct 11134024 TGACACCACTGAGAATGTGAAGGCCAAGATCCAAGACAAGGCGGGCATCCCCACTGACCA 11133965 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | |||||||||| | || |||||||| ||| | | | |||| || || || Sbjct 11133964 GCAGAGGCTGATCTTTGCTAGCAAGCAGCTGGAAGATGGATGCACCCTGTCCGACTACAA 11133905 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| || ||||| || || || ||| ||||| | || || | ||||| Sbjct 11133904 CATCCAGAAGGAGTCCACCCTGCACCTGGTGCTCCGTCTGAGGGGAGG 11133857 >seq12 Length=34595640 Score = 82.4 bits (90), Expect = 7e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | | | || || || || || || || ||||| || || || Sbjct 22518368 GATGCAGATCTTCGTGAGGATCCTGACGGGCAAGACCATCACCCTCGAGGTGGAGCTCAG 22518427 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | | | || | | || ||||||||||| || || || || || || || Sbjct 22518428 TGACACCATCAAGAATGTCAGAGCCAAAATCCAAGACAAGGAGGGCATCCCCCCTGACCA 22518487 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAAC-ATGTCAGATTATA 24881 || ||| |||| |||||||| | |||||||||||| | | |||| | || || || | Sbjct 22518488 GCAGCGTCTGATATTTGCCGGCAGACAGCTGGAGGA-TGGCCAAACTCTCTCTGACTACA 22518546 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || | || || || || || || ||| | ||||| || |||| || || Sbjct 22518547 ACGTCCAGAAAGAGTCTACCCTGCACCTAGTGTTTCGCCTGCGAGGTGG 22518595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449873817288120