Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterocephalus_20glaber_20[refseq_20GCF_5F000247695.1_202012-02-17] 4,229 sequences; 2,618,204,639 total letters Query= NC_022090.1 Length=134643 Score E Sequences producing significant alignments: (Bits) Value seq371 113 4e-20 >seq371 Length=40469 Score = 113 bits (124), Expect = 4e-20 Identities = 118/155 (76%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 127500 GGAACACATATGATAGCTTCTTTATCATCTACAAAGATATGTGCGGATGCAGTGGAAGCC 127559 |||| ||| | ||| |||||||||||| ||||| |||||||| |||||| | | Sbjct 17363 GGAATACACACAATACATTCTTTATCATCAACAAATATATGTGCAGATGCAACAAGTGAC 17422 Query 127560 CAATCAATGTTATATGTATTTTTGTAATAATCTACATTATTTTGAGCTGTAGTATTAATA 127619 |||||||||||||| ||||||| ||||||| ||||||| ||| || || ||||| Sbjct 17423 CAATCAATGTTATAACTATTTTTATAATAATTAACATTATCTTGTGCAGTTGTATTCGGG 17482 Query 127620 TTCCCTGTATCATGAGCTACAATAAAAACGGGTTT 127654 || || ||||| ||||| || |||||| ||||| Sbjct 17483 TTTCCAGTATCGTGAGCGACGGCAAAAACAGGTTT 17517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430710599627676