Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterocephalus_20glaber_20[refseq_20GCF_5F000247695.1_202012-02-17] 4,229 sequences; 2,618,204,639 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq40 114 8e-21 seq22 109 4e-19 seq148 105 4e-18 seq85 102 5e-17 seq41 98.7 6e-16 seq16 96.9 2e-15 seq12 96.9 2e-15 seq126 87.8 1e-12 seq39 86.0 4e-12 seq15 84.2 1e-11 >seq40 Length=22651954 Score = 114 bits (126), Expect = 8e-21 Identities = 140/189 (74%), Gaps = 4/189 (2%) Strand=Plus/Plus Query 34791 TCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCA 34850 |||| ||||| ||||| || || | || |||| ||||| || || ||||| || |||| Sbjct 7366522 TCTGGATGTTGTAGTCAGAGAGAGTTCGGCCATCCTCCAGCTGTTTGCCGGCAAATATCA 7366581 Query 34851 GTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT- 34909 | || |||||||| | || | ||||||||||| | ||||| |||||| || || Sbjct 7366582 GACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCTTGGATTTTGGCTTTGAC--ATTCTC 7366639 Query 34910 -ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAA 34968 || | ||| ||| ||| || || | ||| |||||||| || || |||||||| || || Sbjct 7366640 GATGGTGTCACTGGGCTCCACCTCGAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACGAA 7366699 Query 34969 GATCTGCAT 34977 ||||||||| Sbjct 7366700 GATCTGCAT 7366708 >seq22 Length=29172479 Score = 109 bits (120), Expect = 4e-19 Identities = 156/215 (73%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAG-GCTGCGCTCATC 34824 || |||||||| | |||| ||| |||| ||||| ||||| || || | | || |||| Sbjct 11894360 AGCACCAGGTGCAGGGTGGACTCTTTCTAGATGTTGTAGTCAGAGAGAGGTCTGC-CATC 11894418 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| || || |||| || ||||| || |||||||| | || | ||||||||||| Sbjct 11894419 CTCCAGCTGTTTGTCGGCAAATATCAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTC 11894478 Query 34885 GTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 | ||||| |||||| || || | | ||| ||| ||| || || | ||| ||| Sbjct 11894479 TTGGATTTTGGCTTTGAC--ATTCTTGGTGGTGTCACTGGGCTCCACCTCGAGGGTGATG 11894536 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | ||| ||||| |||||||| | ||||||||||| Sbjct 11894537 GCCTTGCCCGTCAGGGTCTTCAGGAAGATCTGCAT 11894571 >seq148 Length=4887613 Score = 105 bits (116), Expect = 4e-18 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || ||||||| | ||||| ||||| | ||| ||||||||| || || ||||| || Sbjct 4050318 CCACCCCTCAGACGGAGGACAAGGTGCAGAGTGGACTCCTTCTGGATATTGTAGTCAGAA 4050377 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| |||| ||||| ||||| || || ||||| || | |||||||| | || Sbjct 4050378 AGAGTGCGGCCATCTTCCAGCTGCTTCCCTGCAAAGATGAGCCTCTGCTGGTCAGGAGGG 4050437 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928 | || || || || | || || || || || || || | ||| | | ||| | Sbjct 4050438 ATGCCTTCTTTATCCTGGATCTTGGCCTTCAC--ATTCTCAATGGTATCACTAGGCTCCA 4050495 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | ||| |||||||| || || |||||||| |||||||||||||| Sbjct 4050496 CCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 4050544 Score = 96.9 bits (106), Expect = 2e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || || |||| | |||||||||||| | ||| ||| ||||| || || || || || Sbjct 4050546 CCACCTCTCAGGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATATTGTAATCAGAA 4050605 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| |||| || || ||||| || || ||||| || | |||||||| | || Sbjct 4050606 AGAGTGCGGCCATCTTCAAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGAGGG 4050665 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928 | || || || || | || || || || || || || | ||| ||| || | Sbjct 4050666 ATGCCTTCTTTATCCTGGATCTTGGCCTTTAC--ATTCTCAATGGTATCACTGGGTTCCA 4050723 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | ||| |||||||| || || |||||||| |||||||||||||| Sbjct 4050724 CTTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 4050772 Score = 82.4 bits (90), Expect = 5e-11 Identities = 158/231 (68%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 |||| || |||| | ||||||||||| | || ||| ||||| ||||| ||||| | Sbjct 4050772 TTCCACCTCTCAGGCGAAGGACCAGGTGCAGAGTAGACTCTTTCTGGATGTTGTAGTCAG 4050831 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | || |||| |||| || || || || || || ||||| || | |||||||| | | Sbjct 4050832 AAAGAGTGCGGCCATCTTCAAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGAG 4050891 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTC 34926 | | || || || || | || || || || || || || | ||| ||| || Sbjct 4050892 GGATGCCTTCTTTATCCTGGATCTTGGCCTTCAC--ATTCTCAATGGTATCACTGGGTTC 4050949 Query 34927 GACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || | ||| |||||||| || || |||||||| || || || ||||| Sbjct 4050950 CACTTCTAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAAATTTGCAT 4051000 >seq85 Length=11339561 Score = 102 bits (112), Expect = 5e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 |||||||||| | || |||||||| | |||| ||||||||| ||||| ||||| || Sbjct 11133857 CCTCCCCTCAGACGGAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 11133916 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| ||| |||| ||||| ||||| | || |||||||| | |||||||| || Sbjct 11133917 AGGGTGCATCCATCTTCCAGCTGCTTGCTAGCAAAGATCAGCCTCTGCTGGTCAGTGGGG 11133976 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTA--TCGATTCATTGGCCTCGA 34928 | ||| ||||||| | || || || || || || | | ||| ||| || | Sbjct 11133977 ATGCCCGCCTTGTCTTGGATCTTGGCCTTCAC--ATTCTCAGTGGTGTCACTGGGTTCAA 11134034 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | | | | | |||||||| || ||||||||||| | ||||| ||||| Sbjct 11134035 CCTTGAGGATGATGGTCTTGCCAGTGAGGGTCTTCATGAAGATTTGCAT 11134083 >seq41 Length=20498451 Score = 98.7 bits (108), Expect = 6e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 |||||||||| | || |||||||| | |||| ||||||||| || || ||||| || Sbjct 848186 CCTCCCCTCAGGCAGAGCACCAGGTGCAGGGTGGACTCCTTCTGGATATTGTAGTCAGAC 848245 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| ||| |||| ||||| ||||| ||||| |||||||| | || ||||| | || Sbjct 848246 AGGGTGCATCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGTTGGTCAGGGGGG 848305 Query 34871 ACCCCCTCCTTGTC 34884 | ||||||||||| Sbjct 848306 ATTCCCTCCTTGTC 848319 >seq16 Length=31725842 Score = 96.9 bits (106), Expect = 2e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 34760 AACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGC 34819 || |||| || || |||| |||| |||||| |||||||| || || || | | | Sbjct 21647034 AATCTCAACACAAGATGAAGGGTGGACTCCTTTTGAATGTTGTAATCAGACAAAGTACCT 21647093 Query 34820 TCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCC 34879 |||| ||||||||||| || || |||||||| | |||||| || | || | || ||| Sbjct 21647094 CCATCTTCCAGTTGCTTACCAGCAAAGATCAGCCTTTGCTGATCAGGAGGAATTCCTTCC 21647153 Query 34880 TTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTT 34939 || || | || || ||| || | |||| | || || || || || | || Sbjct 21647154 TTATCCTGGATCTTGGCTTTTACATTTTCTATAGTGTCTGAGGGTTCAACCTCGAGCGTG 21647213 Query 34940 ATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||||| ||||| || || |||||||| |||||||| Sbjct 21647214 ATGGTCTTCCCCGTAAGAGTTTTTACAAAAATCTGCAT 21647251 >seq12 Length=34595640 Score = 96.9 bits (106), Expect = 2e-15 Identities = 149/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 || ||||| | ||| ||| ||||| | ||| ||||| || || | | |||| ||| Sbjct 22518577 ACTAGGTGCAGGGTAGACTCTTTCTGGACGTTGTAGTCAGAGAGAGTTTGGCCATCCTCC 22518518 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 || || | ||||| || ||||| || |||||||| | || | ||||||||||| | Sbjct 22518517 AGCTGTCTGCCGGCAAATATCAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCTTGG 22518458 Query 34889 ATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCT 34946 ||||| | |||| || || || | ||| || ||| || || | ||| ||||||| Sbjct 22518457 ATTTTGGCTCTGAC--ATTCTTGATGGTGTCACTGAGCTCCACCTCGAGGGTGATGGTCT 22518400 Query 34947 TTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | ||||| ||| || | || ||||||||||| Sbjct 22518399 TGCCCGTCAGGATCCTCACGAAGATCTGCAT 22518369 >seq126 Length=6421402 Score = 87.8 bits (96), Expect = 1e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831 || |||| | || |||||| |||||||| || ||||| | | || ||| |||||| Sbjct 2409833 AGATGAAGGATGGACTCCTTTTGAATGTTGTAATCCGACAAAGTACGTCCATGTTCCAGT 2409892 Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891 ||||| || || |||||||| | |||||| || | || | || ||||| || | || Sbjct 2409893 TGCTTACCAGCAAAGATCAGCCCTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATC 2409952 Query 34892 TTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCC 34951 || ||| || | |||| | || || || | |||| || |||||||| || Sbjct 2409953 TTGGCTTTTACATTTTCTATAGTGTCTGAGGGTTCAGCCTCAAGTGTGATGGTCTTCCCT 2410012 Query 34952 GTGAGGGTCTTTACAAAGATCTGCAT 34977 || ||||| ||||| || |||||||| Sbjct 2410013 GTAAGGGTTTTTACGAAAATCTGCAT 2410038 >seq39 Length=21454635 Score = 86.0 bits (94), Expect = 4e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822 |||| || || |||| |||| |||||| |||||||| || || || | | || || Sbjct 17272293 CTCAACACAAGATGAAGGGTGAACTCCTTTTGAATGTTGTAATCAGACAAAGTACGTCCA 17272234 Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882 || ||||||||||| || || |||||||| | |||||| || | || | || ||||| Sbjct 17272233 TCTTCCAGTTGCTTACCAGCAAAGATCAGCCTTTGCTGATCAAGAGGAATTCCTTCCTTA 17272174 Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 || | || || ||| || | || | | || | || || || || | || ||| Sbjct 17272173 TCCTGGATCTTGGCTTTTACATTTTCTGTTGTGTCCTAGGGTTCAACCTCGAGCGTGATG 17272114 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || | | ||| ||||| || |||||||| Sbjct 17272113 GTCTTCTCCATAAAGGTTTTTACGAAAATCTGCAT 17272079 >seq15 Length=34776858 Score = 84.2 bits (92), Expect = 1e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 |||| |||| | |||||||||||| | |||| ||||| || ||||| ||||| ||| Sbjct 23700494 CCTCTTCTCAGACACAGGACCAGGTGCAGGGTGGACTCCTAGTGGATGTTGTAGTCAGAT 23700553 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAG 34851 ||| |||| |||| ||||| || || ||||| |||||||| Sbjct 23700554 AGGGTGCGTCCATCTTCCAGCTGTTTGCCGGCAAAGATCAG 23700594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325676013487751