Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterocephalus_20glaber_20[refseq_20GCF_5F000247695.1_202012-02-17] 4,229 sequences; 2,618,204,639 total letters Query= NC_023572.1 Length=42240 Score E Sequences producing significant alignments: (Bits) Value seq372 96.9 9e-16 >seq372 Length=36520 Score = 96.9 bits (106), Expect = 9e-16 Identities = 138/192 (72%), Gaps = 8/192 (4%) Strand=Plus/Plus Query 3621 GCGTATGCAAGCGTATTCGGCAATATCGACAGCTACGGCGATGTCGTTGTCAGGGGCGCA 3680 || ||||| ||| |||| ||| |||| ||| || ||||| | || | |||||| Sbjct 29722 GCCTATGCTTCCGTGTTCGACAACGTCGATTCCTATGGGGATGTGATGGTGAAGGGCGCG 29781 Query 3681 TTCGCCGACGACCTCGCTCGG----TGGGAGAAGTCCGGCAACCCGATCCCGGTGCTGTT 3736 ||||| || |||||||| |||| | | | | |||||||||| |||| Sbjct 29782 TTCGCT--CG--CTCGCTCGCCGATTGGGCGGCGAAAGACGCGCCGATCCCGGCCCTGTG 29837 Query 3737 CGGGCACAACATGGGTGACCCTGACTACAACATCGGCCACGTCGTCGACGCCAAGGAGGA 3796 || ||||||||| |||||| |||||||||||||| ||||| ||||||| |||||||| Sbjct 29838 GGGCCACAACATGTCTGACCCGGACTACAACATCGGTCACGTGCTCGACGCGAAGGAGGA 29897 Query 3797 CGACAACGGCCT 3808 ||| |||| || Sbjct 29898 CGATCACGGGCT 29909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135039618054196