Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterocephalus_20glaber_20[refseq_20GCF_5F000247695.1_202012-02-17] 4,229 sequences; 2,618,204,639 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq148 95.1 1e-14 >seq148 Length=4887613 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/228 (70%), Gaps = 3/228 (1%) Strand=Plus/Minus Query 106237 TTGTCATTT--ATAAGAGTTTAAAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGAC 106294 ||||||||| || | || | |||| |||||||||| || || || ||||||||||||| Sbjct 4051024 TTGTCATTTTAATTACAGGTCAAAA-TGCAAATTTTCGTGAAGACCCTGACTGGCAAGAC 4050966 Query 106295 CATTACCGTGGAAACAGAACCCGGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGA 106354 ||| ||| | ||| |||||| | ||| | ||| | ||||| || || || Sbjct 4050965 CATCACCCTAGAAGTGGAACCCAGTGATACCATTGAGAATGTGAAGGCCAAGATCCAGGA 4050906 Query 106355 CAAAGAAGGCGTGCCCGTTGATCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGA 106414 ||||||||| | || ||| || || ||||| || | ||| |||||||| | ||||| Sbjct 4050905 TAAAGAAGGCATCCCTCCTGACCAGCAGAGGCTCATCTTTGCAGGCAAACAGCTTGAAGA 4050846 Query 106415 TTCTAAAACTATGGGCGATTACAACATACAAAAAGAATCTACACTACA 106462 | ||| | || |||||||| || ||||| ||||| || || Sbjct 4050845 TGGCCGCACTCTTTCTGACTACAACATCCAGAAAGAGTCTACTCTGCA 4050798 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402308863555232