Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterocephalus_20glaber_20[refseq_20GCF_5F000247695.1_202012-02-17] 4,229 sequences; 2,618,204,639 total letters Query= NC_027016.1 Length=226084 Score E Sequences producing significant alignments: (Bits) Value seq85 132 7e-26 seq31 95.1 2e-14 >seq85 Length=11339561 Score = 132 bits (146), Expect = 7e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 213996 AGATTATTGACGGGGAAGTCTACCCTCCTACCGTCAAGGAGGCCCGAGTGCATATGGTTT 214055 |||| ||||| || || | |||||||| || ||||| || ||| || || ||| | | Sbjct 6901767 AGATAATTGATGGAGAGATGTACCCTCCCACAGTCAAAGATACCCAGGTACAGATGATCT 6901826 Query 214056 ACGAACCCAGCGTTCCCGAAAAGTTACGTTTCGCACTGGGTAACGAGATGTTTGGACTCG 214115 || |||| | || || | | || ||||| |||| | ||| | || || || | Sbjct 6901827 ACCCACCCCACACCCCTGAGCACCTGCGCTTCGCCGTGGGCCAGGAGGTCTTCGGCCTAG 6901886 Query 214116 TGCCCGGTTTCATGGTGTACGCCATTATCTGGCTGAGAGAGCACAACAGGGTTTGCGACG 214175 |||||||| | ||| |||| |||| ||||||||| | || |||||||| || ||||||| Sbjct 6901887 TGCCCGGTCTGATGATGTATGCCACCATCTGGCTGCGGGAACACAACAGAGTGTGCGACG 6901946 Query 214176 TGCTGAAACAAGAGCACCCGGAATGGAACGACGAACAGCTGTTCCAGA 214223 |||| ||||| ||||| ||||| ||| | || || | |||||||||| Sbjct 6901947 TGCTTAAACAGGAGCATCCGGAGTGGGATGATGAGCGTCTGTTCCAGA 6901994 >seq31 Length=23434821 Score = 95.1 bits (104), Expect = 2e-14 Identities = 100/132 (76%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 214092 TGGGTAACGAGATGTTTGGACTCGTGCCCGGTTTCATGGTGTACGCCATTATCTGGCTGA 214151 |||| | ||| ||||||| || |||| || ||||| | || |||| |||||||| Sbjct 12925851 TGGGCCAAGAGGTGTTTGGGCTGCTGCCGGGGCTCATGCTCTATGCCACACTCTGGCTGC 12925792 Query 214152 GAGAGCACAACAGGGTTTGCGACGTGCTGAAACAAGAGCACCCGGAATGGAACGACGAAC 214211 | ||||||||| | || |||||| ||||||| ||||||||| ||| | ||||||| Sbjct 12925791 GTGAGCACAACCGTGTGTGCGACCTGCTGAAGGCAGAGCACCCCACCTGGGAAGACGAAC 12925732 Query 214212 AGCTGTTCCAGA 214223 |||| ||||||| Sbjct 12925731 AGCTCTTCCAGA 12925720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 723302562396960