Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterocephalus_20glaber_20[refseq_20GCF_5F000247695.1_202012-02-17] 4,229 sequences; 2,618,204,639 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq40 134 2e-26 seq16 134 2e-26 seq117 125 8e-24 seq12 125 8e-24 seq85 123 3e-23 seq126 122 1e-22 seq39 111 2e-19 seq82 107 2e-18 seq35 107 2e-18 seq15 104 3e-17 seq41 102 9e-17 seq22 102 9e-17 seq66 87.8 2e-12 >seq40 Length=22651954 Score = 134 bits (148), Expect = 2e-26 Identities = 166/227 (73%), Gaps = 4/227 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| || || |||||||| || || || ||||| ||| | || Sbjct 7366708 ATGCAGATCTTCGTGAAGACCCTGACAGGCAAGACCATCACCCTCGAGGTGGAGCCCAGT 7366649 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | || || ||||| || ||||||||||| || || || |||||| Sbjct 7366648 GACACCATCGAGAATGTCAAAGCCAAAATCCAAGACAAGGAGGGCATCCCCCCTGACCAG 7366589 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || ||||| || || || || ||||||| || || || | ||||| || Sbjct 7366588 CAGCGTCTGATATTTGCCGGCAAACAGCTGGAGGATGGCCGAACTCTCTCTGACTACAAC 7366529 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || || || || || ||||| | || || || ||||| Sbjct 7366528 ATCCA----GAGTCTACCCTGCACCTAGTGCTTCGCCTGCGAGGTGG 7366486 >seq16 Length=31725842 Score = 134 bits (148), Expect = 2e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| || || ||||| || ||||| || || || |||||||| | Sbjct 21647251 ATGCAGATTTTTGTAAAAACTCTTACGGGGAAGACCATCACGCTCGAGGTTGAACCCTCA 21647192 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | |||| | || || || || ||||| ||||| ||||||||||| || ||| Sbjct 21647191 GACACTATAGAAAATGTAAAAGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 21647132 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | || || ||||||||||||||||| || |||| |||| | | || || || Sbjct 21647131 CAAAGGCTGATCTTTGCTGGTAAGCAACTGGAAGATGGAGGTACTTTGTCTGATTACAAC 21647072 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||||||| ||||| |||||||| || ||| | | || ||||| Sbjct 21647071 ATTCAAAAGGAGTCCACCCTTCATCTTGTGTTGAGATTCCGTGGTGG 21647025 >seq117 Length=6347111 Score = 125 bits (138), Expect = 8e-24 Identities = 159/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||||||||| | ||||| || || |||||||| || ||||| || || || | | Sbjct 1553981 AATGCAAATCTTCATGAAGACCCTGACTGGCAAGACCATCACTCTGGAAGTGGAACCCAG 1554040 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||||| ||||| ||| | ||||| || || ||||| || || || || ||||| ||||| Sbjct 1554041 TGATACCATTGAGAATGTAAAGGCCAAGATCCAGGATAAAGAAGGCATCCCTCCTGACCA 1554100 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||| | || || ||| | || ||||| || || |||| | || || | ||||| || Sbjct 1554101 CCAGAGGCTCATCTTTACAGGCAAGCAGCTGGAAGATGGCCACACTCTTTCTGACTACAA 1554160 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCT 27623 | || ||||| |||||||| || || ||| | | ||| Sbjct 1554161 CATTCAGAAGGAGTCCACTCTGCACCTTGTCCTCCATCT 1554199 >seq12 Length=34595640 Score = 125 bits (138), Expect = 8e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAG-TCAGG 27464 ||||| ||||| || | || || || |||||||| || || || ||||| ||| |||| Sbjct 22518369 ATGCAGATCTTCGTGAGGATCCTGACGGGCAAGACCATCACCCTCGAGGTGGAGCTCAG- 22518427 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| | ||| ||| | | || ||||| || ||||||||||| || || || ||||| Sbjct 22518428 TGACACCATCAAGAATGTCAGAGCCAAAATCCAAGACAAGGAGGGCATCCCCCCTGACCA 22518487 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||||||||| || ||||| || | || || ||||||| | || || | ||||| || Sbjct 22518488 GCAGCGTCTGATATTTGCCGGCAGACAGCTGGAGGATGGCCAAACTCTCTCTGACTACAA 22518547 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||| || || || || || || ||||| || || || || ||||| Sbjct 22518548 CGTCCAGAAAGAGTCTACCCTGCACCTAGTGTTTCGCCTGCGAGGTGG 22518595 >seq85 Length=11339561 Score = 123 bits (136), Expect = 3e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| | ||||| || || |||||||| || | || ||||||| | || Sbjct 11134083 ATGCAAATCTTCATGAAGACCCTCACTGGCAAGACCATCATCCTCAAGGTTGAACCCAGT 11134024 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || || ||| ||||||| || || || ||||||| ||| || || | |||||| Sbjct 11134023 GACACCACTGAGAATGTGAAGGCCAAGATCCAAGACAAGGCGGGCATCCCCACTGACCAG 11133964 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || |||||| | ||||| || || |||| | ||||| | ||||| || Sbjct 11133963 CAGAGGCTGATCTTTGCTAGCAAGCAGCTGGAAGATGGATGCACCCTGTCCGACTACAAC 11133904 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCT 27623 |||| ||||| ||||| || || || || | ||||| Sbjct 11133903 ATCCAGAAGGAGTCCACCCTGCACCTGGTGCTCCGTCT 11133866 >seq126 Length=6421402 Score = 122 bits (134), Expect = 1e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || || || ||||| || ||||| || || ||||||| ||| | Sbjct 2410038 ATGCAGATTTTCGTAAAAACCCTTACAGGGAAGACCATCACACTTGAGGCTGAACCCTCA 2409979 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | |||| | || || || || ||||| ||||| ||||||||||| || ||| Sbjct 2409978 GACACTATAGAAAATGTAAAAGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 2409919 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | || || ||||||||||||||||| || ||| ||||| | | || || || Sbjct 2409918 CAAGGGCTGATCTTTGCTGGTAAGCAACTGGAACATGGACGTACTTTGTCGGATTACAAC 2409859 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||||||| |||| |||||||| | ||| | || || | ||| Sbjct 2409858 ATTCAAAAGGAGTCCATCCTTCATCTTGCATTGAGACTCCGTGCTGG 2409812 >seq39 Length=21454635 Score = 111 bits (122), Expect = 2e-19 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTC--AG 27463 ||||| || || || || || ||| | ||||| || || || |||||||| | || Sbjct 17272079 ATGCAGATTTTCGTAAAAACCTTTATGGAGAAGACCATCACGCTCGAGGTTGAACCCTAG 17272138 Query 27464 GTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 | | | || | |||| | || || || || ||||| ||||| |||||||||| || | Sbjct 17272139 GACACAACA--GAAAATGTAAAAGCCAAGATCCAGGATAAGGAAGGAATTCCTCTTGATC 17272196 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 |||| | || || ||||||||||||||||| || |||| ||||| | | || || | Sbjct 17272197 AGCAAAGGCTGATCTTTGCTGGTAAGCAACTGGAAGATGGACGTACTTTGTCTGATTACA 17272256 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | | |||||||| | ||| |||||||| || ||| | || | | |||| Sbjct 17272257 ACATTCAAAAGGAGTTCACCCTTCATCTTGTGTTGAGACTCCTCAGTGG 17272305 >seq82 Length=11338420 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| | ||||| || || || |||| || || || || | ||| | || Sbjct 1447335 ATGCAAATCTTCATGAAGACCCTCACGGGTCAGACCATCACCCTCGACGGTGAACCCAGT 1447394 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || || ||| ||||||| || || || |||||||||| || | || |||||| Sbjct 1447395 GACACCACTGAGAATATGAAGGCCAAGATCCAAGACAAGGAGGCCATCTCCCCTGACCAG 1447454 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || ||||| || |||||| | || ||||| | |||| | |||| || Sbjct 1447455 CAGAGGCTGATCTTTGCAGGCAAGCAATTGGAAGATGAACACACCCCGTCCAACTACAAC 1447514 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGT 27614 |||| ||||| ||||| || || || || Sbjct 1447515 ATCCAGAAGGAGTCCACCCTACACCTGGT 1447543 >seq35 Length=22943593 Score = 107 bits (118), Expect = 2e-18 Identities = 150/209 (72%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGA---GTCA 27462 || || || ||||| || || ||| | | ||||| || |||||||||||||| ||| Sbjct 21587176 ATACAGATTTTTGTAAAAACTCTTGCAAGGAAGACCATCACTCTTGAGGTTGAACTCTCA 21587235 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 |||| || | |||| | |||| || || ||||| ||||| ||||||||||| || Sbjct 21587236 ---GATACTATAGAAAATGTAGAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 21587292 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 ||||| || || ||||||||||||||| | || |||| | | | | | || || Sbjct 21587293 CAGCAAAAGCTGATATTTGCTGGTAAGCAAGTGGAAGATGGACATGCTTTGTCTGATTAC 21587352 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCT 27611 || | |||||||| ||| | |||||||| Sbjct 21587353 AACATTCAAAAGGAGTCCCCCCTTCATCT 21587381 >seq15 Length=34776858 Score = 104 bits (114), Expect = 3e-17 Identities = 142/197 (72%), Gaps = 1/197 (1%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| | ||||| ||||| ||||| | || || || || || || | || Sbjct 23700492 ATGCAAATCTTCATGAAGACCCTTACTGGCAACATCATCACCCTCGAAGTAGAACCCAGT 23700433 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | ||||| || || || ||||||||| | || || ||| ||||| Sbjct 23700432 GAAACCATTCAGAATGTCAAGGCCAAGATCCAAGACAAGGAGAGCATCCCCCCA-ACCAG 23700374 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || ||||| | ||||| || || |||| || ||||| | ||||| | Sbjct 23700373 CAGAGGCTGATCTTTGCCAGCAAGCAGCTGGAAGATGGACGCACCCTGTCTGACTACAGC 23700314 Query 27586 GTCCAAAAGGAATCCAC 27602 |||| ||||| ||||| Sbjct 23700313 ATCCAGAAGGAGTCCAC 23700297 >seq41 Length=20498451 Score = 102 bits (112), Expect = 9e-17 Identities = 113/151 (75%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 27464 GTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 |||| | ||||| || ||||||| || || || |||||||||||||| || || |||| Sbjct 848354 GTGACACCATTGAGAACATGAAGGCCAAGATCCAAGACAAGGAGGGAATCCCCCCTGACC 848295 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 | ||| | || || ||||| || ||||| || || |||| | ||||| | ||||| | Sbjct 848294 AACAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGATGCACCCTGTCTGACTACA 848235 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGT 27614 || |||| ||||| ||||| || || || || Sbjct 848234 ATATCCAGAAGGAGTCCACCCTGCACCTGGT 848204 >seq22 Length=29172479 Score = 102 bits (112), Expect = 9e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| | ||||| || || |||||| | || || || ||||| ||| | || Sbjct 11894571 ATGCAGATCTTCCTGAAGACCCTGACGGGCAAGGCCATCACCCTCGAGGTGGAGCCCAGT 11894512 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || ||| | || || ||||| || ||||||||||| || || || |||||| Sbjct 11894511 GACACCACCAAGAATGTCAAAGCCAAAATCCAAGACAAGGAGGGCATCCCCCCTGACCAG 11894452 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || ||||| | || || || ||||||| | | || | ||||| || Sbjct 11894451 CAGCGTCTGATATTTGCCGACAAACAGCTGGAGGATGGCAGACCTCTCTCTGACTACAAC 11894392 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGT 27614 || | || || ||||| || || || || Sbjct 11894391 ATCTAGAAAGAGTCCACCCTGCACCTGGT 11894363 >seq66 Length=12983316 Score = 87.8 bits (96), Expect = 2e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 32125 ACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCGAGCCA 32184 ||||| |||| | |||||||||||||| ||| ||||| |||||| | | |||| Sbjct 2913902 ACCATCATCAATTTGGCTCAGAACTTTGTGGGTAGCAATAATCTGAACCTCTTGCAGCCC 2913961 Query 32185 TCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTACATC 32244 ||| |||||||| ||| |||| |||||||||||| |||| || | || |||||| Sbjct 2913962 ATTGGTCAGTTTGGTACCAGGCTGCATGGTGGCAAGGATTCTGCTAGTCCTCGATACATC 2914021 Query 32245 TTCACC 32250 |||||| Sbjct 2914022 TTCACC 2914027 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570280251966480