Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterocephalus_20glaber_20[refseq_20GCF_5F000247695.1_202012-02-17] 4,229 sequences; 2,618,204,639 total letters Query= NC_028779.1 Length=43680 Score E Sequences producing significant alignments: (Bits) Value seq372 116 1e-21 >seq372 Length=36520 Score = 116 bits (128), Expect = 1e-21 Identities = 136/181 (75%), Gaps = 11/181 (6%) Strand=Plus/Plus Query 3621 CGTGTTCGGCAACGTCGACAGCTACGGCGATGTTGTGGTTAAGGGCGCGTTCG-TCGACG 3679 |||||||| ||||||||| ||| || ||||| |||| ||||||||||||| ||| Sbjct 29733 CGTGTTCGACAACGTCGATTCCTATGGGGATGTGATGGTGAAGGGCGCGTTCGCTCG--- 29789 Query 3680 ACCTCGCGCGC----TGGGAGAAGTCCGGCAACCCGATCCCGGTGTTGTTCGGGCACAAC 3735 ||||| ||| |||| | | | | |||||||||| ||| || |||||| Sbjct 29790 --CTCGCTCGCCGATTGGGCGGCGAAAGACGCGCCGATCCCGGCCCTGTGGGGCCACAAC 29847 Query 3736 ATGGGTGACCCCGACTACAACATCGGCCACGTCGTCGACGCCAAGGAGGACGA-CACCGG 3794 ||| |||||| |||||||||||||| ||||| ||||||| ||||||||||| ||| || Sbjct 29848 ATGTCTGACCCGGACTACAACATCGGTCACGTGCTCGACGCGAAGGAGGACGATCACGGG 29907 Query 3795 C 3795 | Sbjct 29908 C 29908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139647386643316