Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterocephalus_20glaber_20[refseq_20GCF_5F000247695.1_202012-02-17] 4,229 sequences; 2,618,204,639 total letters Query= NC_028917.1 Length=41931 Score E Sequences producing significant alignments: (Bits) Value seq371 170 5e-38 >seq371 Length=40469 Score = 170 bits (188), Expect = 5e-38 Identities = 281/411 (68%), Gaps = 12/411 (3%) Strand=Plus/Plus Query 27147 ATCACTTCATTTCTCTTTTGCGTTCTCGTCTTGCTTTAATTAATTCCTCGTACGTAATCC 27206 ||||| || | || | |||||||| ||||| | || | ||||| || ||||| | || Sbjct 344 ATCACCTCTTAGCTTTCTTGCGTTCGCGTCTCACCTTGTTCAATTCTTCATACGTTACCC 403 Query 27207 ATGTTTTGCCTGTGTATTTAGGCGCTTTACATATCCACGTTAAATTCACATCTCTATACT 27266 | ||| |||||||| ||||| |||||||||||||| || | || |||| ||| Sbjct 404 AGTCTTTACCTGTGTACTTAGGTGCTTTACATATCCAAGTAAGTTTTACATTGGGATATA 463 Query 27267 GATATCTGAATATCTTCGCTTTGATGTTGGCAACTTCAGTCGCCTTACCTTTAACGTCTA 27326 ||||||| |||| |||||| || | || || ||| |||||| | ||||||||||||| Sbjct 464 GATATCTAAATAACTTCGCCTTTAACTTAGCCGTTTCTGTCGCCATGCCTTTAACGTCTA 523 Query 27327 TAACTTCAACCAGTTTCCCTTCCTTCCACAAAGAGAAATCGGCTATATACGTAATCGGTC 27386 | ||||||| || || | | ||||| | | || || || ||||| | | | Sbjct 524 TGACTTCAATCAACTTGTCGTTATTCCATAGTGCAAAGTCTGCAATATATTCAGTTTTAC 583 Query 27387 TTTGCTTCCCAAATTTAGGTTGTAGTTCNNNNNNNNNNNNNNNNNNNNTATGATCATAAT 27446 ||| || |||||||||||| ||| || ||| |||||| Sbjct 584 GTTGTTTACCAAATTTAGGTATTAGCTCATATCTCGGTTGTATCTCGATATAGTCATAA- 642 Query 27447 TAGTTCCATTCAT-ATTACT-----TTCTAAATATTGGTAATATTCACATTCTACTTTGC 27500 |||| || |||| | |||||| || | ||| || |||||||| ||||||| Sbjct 643 -----CCATCTATAATTAATCGTTGTTCTAAGTACTTGTAGTAATCACATTCAACTTTGC 697 Query 27501 TATCAAATACAATTCCTTTGTACTCAACTTTCTTAGCGTTGTATTTACTCA 27551 |||| || || ||||| |||||||||||||| || ||||||||||||| Sbjct 698 TATCGAACGTTATACCTTTATACTCAACTTTCTTTGCATTGTATTTACTCA 748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 134050867711114