Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterocephalus_20glaber_20[refseq_20GCF_5F000247695.1_202012-02-17] 4,229 sequences; 2,618,204,639 total letters Query= NC_030933.1 Length=133798 Score E Sequences producing significant alignments: (Bits) Value seq371 118 9e-22 >seq371 Length=40469 Score = 118 bits (130), Expect = 9e-22 Identities = 119/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 132893 GGAACACATATGATAGCTTCTTTATCATCTACAAAGATATGTGCGGATGCAGTAGAAGCC 132952 |||| ||| | ||| |||||||||||| ||||| |||||||| |||||| | | | Sbjct 17363 GGAATACACACAATACATTCTTTATCATCAACAAATATATGTGCAGATGCAACAAGTGAC 17422 Query 132953 CAATCAATGTTATATGTATTTTTGTAATAATCTACATTATTTTGAGCTGTAGTATTAATA 133012 |||||||||||||| ||||||| ||||||| ||||||| ||| || || ||||| Sbjct 17423 CAATCAATGTTATAACTATTTTTATAATAATTAACATTATCTTGTGCAGTTGTATTCGGG 17482 Query 133013 TTCCCTGTATCATGAGCTACAATAAAAACGGGTTT 133047 || || ||||| ||||| || |||||| ||||| Sbjct 17483 TTTCCAGTATCGTGAGCGACGGCAAAAACAGGTTT 17517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428006738994371