Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterocephalus_20glaber_20[refseq_20GCF_5F000247695.1_202012-02-17] 4,229 sequences; 2,618,204,639 total letters Query= NC_031052.1 Length=57804 Score E Sequences producing significant alignments: (Bits) Value seq372 131 6e-26 >seq372 Length=36520 Score = 131 bits (144), Expect = 6e-26 Identities = 210/299 (70%), Gaps = 12/299 (4%) Strand=Plus/Plus Query 53751 CTGTACGGGTTCGTGCCCGGTCAGAAGGGCTCAGGACGTCTGGGGCGTGGTGGTGACCGC 53810 |||||||||||| ||||| | ||| |||||| ||||| |||||||| || || Sbjct 25235 CTGTACGGGTTCAC-CCCGGGC-----GGCGAAGGACGGCTGGGCCGTGGTGGCGAGCGG 25288 Query 53811 TGGTTCGGCGACAACAGCCAGGCGACGACCCTGTTCTAC---GACAAGCCGCCGGCCAAC 53867 |||||||||||||||| || || ||| ||||| || || |||||| | Sbjct 25289 TGGTTCGGCGACAACAAACA---AACCACCGTGTTCGACTTTCCTAAACCGCCGTCGTCG 25345 Query 53868 AAGGACCATCCCACGATGAAGCCGGTCGACCTGATCGGGCACATGCTCGGCAACTCGTGC 53927 ||||| || || || ||||| ||||| || || ||| ||||||| |||||| ||| Sbjct 25346 AAGGATCACCCGACAATGAAACCGGTTGATTTGGTCGCCGCTATGCTCGCCAACTCATGC 25405 Query 53928 CCGCCCGGTGGTGTGGTGTTCGACCCGTTCGGCGGGTCGGGGTCGACGATGGCGGCCGCG 53987 | ||||||||| | ||| ||||| |||||| || || || |||||| | |||||| Sbjct 25406 CGGCCCGGTGGCATCGTGCTCGACTTGTTCGGTGGTTCCGGTTCGACGCTTATCGCCGCG 25465 Query 53988 CACGTGACCGGACGGCGGGCAGCGCTGGTGGAGCTGGACCCGAAGTACGGCGAGGTCAT 54046 ||| ||| | ||| || ||||||||| || || ||| ||| | ||| || || Sbjct 25466 CACCACGGCGGGCAGCGCGCCCGGCTGGTGGAACTCGATCCGCGGTATGTCGATGTGAT 25524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 184841916888268