Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterocephalus_20glaber_20[refseq_20GCF_5F000247695.1_202012-02-17] 4,229 sequences; 2,618,204,639 total letters Query= NC_031224.1 Length=59443 Score E Sequences producing significant alignments: (Bits) Value seq41 93.3 2e-14 >seq41 Length=20498451 Score = 93.3 bits (102), Expect = 2e-14 Identities = 103/135 (76%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 52110 ATGGCGTTGGCTCCCTGCCATACACTATTCCAATTCTATGTAGCTGAA-GGTAAGCTTTC 52168 |||||| || ||||||||||| | || | ||| ||||| || | |||| || |||| || Sbjct 11146737 ATGGCGCTGCCTCCCTGCCATGCCCTCTGCCAGTTCTACGT-GGTGAACGGAGAGCTGTC 11146795 Query 52169 GTGCCATTTGTATCAGCGGTCTGCCGACATGTTCTTGGGCGTTCCGTTTAACATTGCCAG 52228 ||||| |||| ||||| || | |||||| | ||||||| || || ||||||||||| Sbjct 11146796 CTGCCAGCTGTACCAGCGCTCCGGGGACATGGGCCTGGGCGTGCCCTTCAACATTGCCAG 11146855 Query 52229 CTATTCCTTGCTGAC 52243 ||| || |||| || Sbjct 11146856 CTACGCCCTGCTCAC 11146870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190086453497690