Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterocephalus_20glaber_20[refseq_20GCF_5F000247695.1_202012-02-17] 4,229 sequences; 2,618,204,639 total letters Query= NC_031253.1 Length=77832 Score E Sequences producing significant alignments: (Bits) Value seq372 149 3e-31 >seq372 Length=36520 Score = 149 bits (164), Expect = 3e-31 Identities = 247/353 (70%), Gaps = 8/353 (2%) Strand=Plus/Plus Query 276 CGAACTCCACACATTCCTGGGGAATCCCCGGCGCGGCAACGTCGCCCGGATCGCCGAGTC 335 ||| ||| |||| ||| ||| || || |||||| |||||||| |||| || || Sbjct 24325 CGACCTCTACACCTTCGAAAAGAACCCACGCCGCGGCGACGTCGCCAAAGTCGCTGAATC 24384 Query 336 GCTGGCGGTCAACGGCATGTACAAGCCGGTGGTGGTCAACCGCGGCACCCACACGGGCCG 395 |||| | |||| ||| ||| | || |||||||||||||| || || ||||| Sbjct 24385 GCTGCATCTACGCGGCCAATACCGACCGATCGTCGTCAACCGCGGCACTCATACCGGCCG 24444 Query 396 ACCCAACGAGGTGCTGGCGGGCAACCACACCCTGATGGCCGCCCGGGAGCTGGGCTGGAC 455 || || || || || ||||| ||||| || | ||||| || ||| |||||| Sbjct 24445 CGACATGGAAGTCCTAGCCGGCAATCACACGTTGCTTGCCGCTCGCTCGCTCGGCTGGCA 24504 Query 456 GGAGCTCAACGCCTGGGTGATTGACGTGGACGAGC-ACCAGGCCAAGAAGATCGTCGCCG 514 || || ||| | | | || ||||||||||| | | | | || | ||| ||| || Sbjct 24505 ACAGATCGACGTCGGCATCATCGACGTGGACGAACCAACCGCCCGCGC-GATAGTCCTCG 24563 Query 515 CCGACAACCGGACGGCCGACCTGGGCGACTACGACAACGAAGCCA---TGATCGAGCTGT 571 | ||||||||| ||||| || |||| ||| ||| ||||||| || |||| || Sbjct 24564 CTGACAACCGGCTCGCCGATCTCGGCGGCTATGAC---GAAGCCACCTTGGTCGAATTGC 24620 Query 572 TGGAATCGCTCGATGACCTGGAGGGCACGGGTTACGACGACGACGACCTGGAC 624 ||||||||||||| ||| ||| ||||| ||||||||||||| ||| ||||| Sbjct 24621 TGGAATCGCTCGACGACATGGCTGGCACCGGTTACGACGACGCCGATTTGGAC 24673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 248924769522717