Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterocephalus_20glaber_20[refseq_20GCF_5F000247695.1_202012-02-17] 4,229 sequences; 2,618,204,639 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq148 123 6e-23 seq16 122 2e-22 seq40 118 2e-21 seq12 105 2e-17 seq126 104 5e-17 seq39 89.7 1e-12 seq85 87.8 4e-12 >seq148 Length=4887613 Score = 123 bits (136), Expect = 6e-23 Identities = 159/218 (73%), Gaps = 6/218 (3%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| || || |||||||||||||| ||||||||||| || | | ||| | |||||| Sbjct 4050789 AGGACCAGGTGCAGAGTAGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCT 4050848 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||| || || ||||| |||||||||||||| | | ||| ||||| || || Sbjct 4050849 TCAAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGAGGGATGCCTTCTTTATCC 4050908 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || || || || ||| |||| | | | || ||| || ||||| || || || Sbjct 4050909 TGGATCTTGGCCTTCACATTCTCAATGGTATC---ACTGGGTTCCACTTCTAGGGTGATG 4050965 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || ||||| || || ||||||||||| | |||||||| Sbjct 4050966 GTCTTGCCAGTCAGGGTCTTCACGAAAATTTGCATTTT 4051003 Score = 122 bits (134), Expect = 2e-22 Identities = 160/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 ||| || | ||||||||| || ||||| ||||| || ||||| ||||| || | | ||| Sbjct 4050323 CCTCAGACGGAGGACAAGGTGCAGAGTGGACTCCTTCTGGATATTGTAGTCAGAAAGAGT 4050382 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002 | |||||||| || ||||| || ||||| |||||||||||||| | | ||| || Sbjct 4050383 GCGGCCATCTTCCAGCTGCTTCCCTGCAAAGATGAGCCTCTGCTGGTCAGGAGGGATGCC 4050442 Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062 ||| || || || || || || ||| |||| | | | || | ||| || || || Sbjct 4050443 TTCTTTATCCTGGATCTTGGCCTTCACATTCTCAATGGTATCACTAGGCTCCACCTCCAG 4050502 Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || ||||| || || |||||||| |||| |||||| Sbjct 4050503 GGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 4050544 Score = 116 bits (128), Expect = 9e-21 Identities = 156/216 (72%), Gaps = 6/216 (3%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| || || ||||| |||||||| ||||| |||||||| | | ||| | |||||| Sbjct 4050561 AGGACCAGGTGCAGAGTGGACTCTTTCTGGATATTGTAATCAGAAAGAGTGCGGCCATCT 4050620 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || || ||||| |||||||||||||| | | ||| ||||| || || Sbjct 4050621 TCAAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGAGGGATGCCTTCTTTATCC 4050680 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || || || || ||| |||| | | | || ||| || ||||| || || || Sbjct 4050681 TGGATCTTGGCCTTTACATTCTCAATGGTATC---ACTGGGTTCCACTTCCAGGGTGATG 4050737 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || ||||| || || |||||||| |||| ||||||| Sbjct 4050738 GTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATT 4050773 >seq16 Length=31725842 Score = 122 bits (134), Expect = 2e-22 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955 ||||||||||| || ||||| ||||| ||||||||||| | ||||| | |||||||| Sbjct 21647043 ACAAGATGAAGGGTGGACTCCTTTTGAATGTTGTAATCAGACAAAGTACCTCCATCTTCC 21647102 Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015 || || || || ||||| ||||| ||||| || | | ||||||||||| || || Sbjct 21647103 AGTTGCTTACCAGCAAAGATCAGCCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGG 21647162 Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075 || || ||| ||| | |||| ||||||| || || || || || || || || Sbjct 21647163 ATCTTGGCTTTTACATTTTCTATAGTGTCTGAGGGTTCAACCTCGAGCGTGATGGTCTTC 21647222 Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 ||||| ||||| || || || | |||||| || Sbjct 21647223 CCCGTAAGAGTTTTTACAAAAATCTGCATCTT 21647254 >seq40 Length=22651954 Score = 118 bits (130), Expect = 2e-21 Identities = 156/215 (73%), Gaps = 10/215 (5%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || || || || ||||||||| |||||||||| || | | ||||| ||||| Sbjct 7366501 AGCACTAGGTGCAGGGTAGACTCT----GGATGTTGTAGTCAGAGAGAGTTCGGCCATCC 7366556 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||| ||||| || || || | ||||||||| | | ||| || ||||| ||| Sbjct 7366557 TCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCT 7366616 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || ||||| ||||||| |||| | | |||| ||| ||| || || || || || Sbjct 7366617 TGGATTTTGGCTTTGACATTCTCGATGGTGTC---ACTGGGCTCCACCTCGAGGGTGATG 7366673 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| || || ||||||||||||| |||||| Sbjct 7366674 GTCTTGCCTGTCAGGGTCTTCACGAAGATCTGCAT 7366708 >seq12 Length=34595640 Score = 105 bits (116), Expect = 2e-17 Identities = 151/211 (72%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955 || || || || ||||||||||| |||| |||||| || | | |||| ||||| || Sbjct 22518577 ACTAGGTGCAGGGTAGACTCTTTCTGGACGTTGTAGTCAGAGAGAGTTTGGCCATCCTCC 22518518 Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015 || | | ||||| || || || | ||||||||| | | ||| || ||||| ||||| Sbjct 22518517 AGCTGTCTGCCGGCAAATATCAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCTTGG 22518458 Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGT--CTGAACTCTCTACTTCAAGAGTAATAGTTT 152073 ||||| | ||||| ||| | | ||| |||| ||| || || || || || || | Sbjct 22518457 ATTTTGGCTCTGACATTCTTGATGGTGTCACTGA--GCTCCACCTCGAGGGTGATGGTCT 22518400 Query 152074 TGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||||| || || ||||||||| |||||| Sbjct 22518399 TGCCCGTCAGGATCCTCACGAAGATCTGCAT 22518369 >seq126 Length=6421402 Score = 104 bits (114), Expect = 5e-17 Identities = 156/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 |||||| | |||||||||| | ||||| ||||| ||||||||||| | ||||| | Sbjct 2409820 GAGTCTCAATGCAAGATGAAGGATGGACTCCTTTTGAATGTTGTAATCCGACAAAGTACG 2409879 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 |||| ||| || || || || ||||| |||| ||||| || | | |||||||| Sbjct 2409880 TCCATGTTCCAGTTGCTTACCAGCAAAGATCAGCCCTTGCTGATCAGGAGGAATTCCTTC 2409939 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || ||| ||| | |||| ||||||| || | ||||| || Sbjct 2409940 CTTATCCTGGATCTTGGCTTTTACATTTTCTATAGTGTCTGAGGGTTCAGCCTCAAGTGT 2409999 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || || || || || || || ||||| | |||||| || Sbjct 2410000 GATGGTCTTCCCTGTAAGGGTTTTTACGAAAATCTGCATCTT 2410041 >seq39 Length=21454635 Score = 89.7 bits (98), Expect = 1e-12 Identities = 153/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 |||||| | ||||||||||| || |||| ||||| ||||||||||| | ||||| | Sbjct 17272297 GAGTCTCAACACAAGATGAAGGGTGAACTCCTTTTGAATGTTGTAATCAGACAAAGTACG 17272238 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 |||||||| || || || || ||||| ||||| ||||| || | |||||||| Sbjct 17272237 TCCATCTTCCAGTTGCTTACCAGCAAAGATCAGCCTTTGCTGATCAAGAGGAATTCCTTC 17272178 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || ||| ||| | ||| |||| | || || || || || Sbjct 17272177 CTTATCCTGGATCTTGGCTTTTACATTTTCTGTTGTGTCCTAGGGTTCAACCTCGAGCGT 17272118 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || || || | | || || ||||| | |||||| || Sbjct 17272117 GATGGTCTTCTCCATAAAGGTTTTTACGAAAATCTGCATCTT 17272076 >seq85 Length=11339561 Score = 87.8 bits (96), Expect = 4e-12 Identities = 155/225 (69%), Gaps = 6/225 (3%) Strand=Plus/Plus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 ||| || | ||| || || || || || ||||| || ||||||||||| |||| | || Sbjct 11133862 CCTCAGACGGAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGT 11133921 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002 | |||||||| || || | || ||||| |||||||||||||| | | ||| || Sbjct 11133922 GCATCCATCTTCCAGCTGCTTGCTAGCAAAGATCAGCCTCTGCTGGTCAGTGGGGATGCC 11133981 Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTC 152059 |||| ||||| || || || ||| |||| | |||| ||| || || | Sbjct 11133982 CGCCTTGTCTTGGATCTTGGCCTTCACATTCTCAGTGGTGTC---ACTGGGTTCAACCTT 11134038 Query 152060 AAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || | || || ||||| ||||| ||||||| ||||| ||||| Sbjct 11134039 GAGGATGATGGTCTTGCCAGTGAGGGTCTTCATGAAGATTTGCAT 11134083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153758281301659