Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterocephalus_20glaber_20[refseq_20GCF_5F000247695.1_202012-02-17] 4,229 sequences; 2,618,204,639 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq148 120 2e-22 seq16 118 8e-22 seq85 109 4e-19 seq39 105 5e-18 seq82 102 6e-17 seq40 102 6e-17 seq126 100 2e-16 seq117 100 2e-16 >seq148 Length=4887613 Score = 120 bits (132), Expect = 2e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || |||||||| | || |||||||| || ||| ||| || ||||| |||||||| Sbjct 4050542 CATCCCACCTCTCAGGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATATTGTAATC 4050601 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || ||| | || || |||||||| || |||||||| | | |||||| || | Sbjct 4050602 AGAAAGAGTGCGGCCATCTTCAAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGG 4050661 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 ||| | ||||| || ||| ||||| ||| | | | ||||| || || ||| Sbjct 4050662 AGGGATGCCTTCTTTATCCTGGATCTTGGCCTTTACATTCTCAATGGTATCACTGGGTTC 4050721 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| |||| || || ||||| || || ||||||||||| ||||| ||||| Sbjct 4050722 CACTTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 4050772 Score = 114 bits (126), Expect = 9e-21 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 |||||| |||||||| | | |||||||| || || ||| || ||||||||||| || Sbjct 4050770 CATTCCACCTCTCAGGCGAAGGACCAGGTGCAGAGTAGACTCTTTCTGGATGTTGTAGTC 4050829 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || ||| | || || ||||| || || |||||||| | | |||||| || | Sbjct 4050830 AGAAAGAGTGCGGCCATCTTCAAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGG 4050889 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 ||| | ||||| || ||| ||||| ||||| | | ||||| || || ||| Sbjct 4050890 AGGGATGCCTTCTTTATCCTGGATCTTGGCCTTCACATTCTCAATGGTATCACTGGGTTC 4050949 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || | || || ||||| || || |||||||||||||| |||||||| Sbjct 4050950 CACTTCTAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAAATTTGCAT 4051000 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || ||||| | | || ||||| || ||| |||||| ||||| ||||| || | Sbjct 4050318 CCACCCCTCAGACGGAGGACAAGGTGCAGAGTGGACTCCTTCTGGATATTGTAGTCAGAA 4050377 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || ||| | || |||||||||||||| |||||||| | | |||||| || | ||| Sbjct 4050378 AGAGTGCGGCCATCTTCCAGCTGCTTCCCTGCAAAGATGAGCCTCTGCTGGTCAGGAGGG 4050437 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290 | ||||| || ||| ||||| ||||| | | ||||| || | |||||| Sbjct 4050438 ATGCCTTCTTTATCCTGGATCTTGGCCTTCACATTCTCAATGGTATCACTAGGCTCCACC 4050497 Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||| || || ||||| || || ||||||||||| ||||| ||||| Sbjct 4050498 TCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 4050544 >seq16 Length=31725842 Score = 118 bits (130), Expect = 8e-22 Identities = 158/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 44122 TCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC-GGCGAGTTGGCGCT 44180 ||||||||| || ||||| ||| ||||||||| ||||||||||| | | | | | | Sbjct 21647036 TCTCAACACAAGATGAAGGGTGGACTCCTTTTGAATGTTGTAATCAGACAAAGTACCTC- 21647094 Query 44181 CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCT 44240 | || ||||| ||||| || |||||||||| | |||||||| | ||| | ||||||| Sbjct 21647095 CATCTTCCAGTTGCTTACCAGCAAAGATCAGCCTTTGCTGATCAGGAGGAATTCCTTCCT 21647154 Query 44241 TTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAA 44300 | ||| ||||| || | || |||| ||||| | || ||| ||||| | ||| | Sbjct 21647155 TATCCTGGATCTTGGCTTTTACATTTTCTATAGTGTCTGAGGGTTCAACCTCGAGCGTGA 21647214 Query 44301 TCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | ||||| ||||| || || || || || || ||||| Sbjct 21647215 TGGTCTTCCCCGTAAGAGTTTTTACAAAAATCTGCAT 21647251 >seq85 Length=11339561 Score = 109 bits (120), Expect = 4e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167 || || || ||||| | | ||||||||| || ||| |||||| ||||||||||| ||| Sbjct 11133854 ATACCTCCCCTCAGACGGAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCG 11133913 Query 44168 GCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAA 44227 | || || | || ||||||||||| | |||||||||| | |||||| || | Sbjct 11133914 GACAGGGTGCATCCATCTTCCAGCTGCTTGCTAGCAAAGATCAGCCTCTGCTGGTCAGTG 11133973 Query 44228 GGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCC 44287 || | || |||| || ||||| ||||| | | ||||||| || ||| Sbjct 11133974 GGGATGCCCGCCTTGTCTTGGATCTTGGCCTTCACATTCTCAGTGGTGTCACTGGGTTCA 11134033 Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||| | | || ||||| || ||||||||||||| |||||||||||| Sbjct 11134034 ACCTTGAGGATGATGGTCTTGCCAGTGAGGGTCTTCATGAAGATTTGCAT 11134083 >seq39 Length=21454635 Score = 105 bits (116), Expect = 5e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179 ||||||||||| || ||||| ||| ||||||||| ||||||||||| | | || Sbjct 17272296 AGTCTCAACACAAGATGAAGGGTGAACTCCTTTTGAATGTTGTAATCAGACAAAGTACGT 17272237 Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 | || ||||| ||||| || |||||||||| | |||||||| ||| | |||||| Sbjct 17272236 CCATCTTCCAGTTGCTTACCAGCAAAGATCAGCCTTTGCTGATCAAGAGGAATTCCTTCC 17272177 Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299 || ||| ||||| || | || || | ||||| || ||| ||||| | ||| Sbjct 17272176 TTATCCTGGATCTTGGCTTTTACATTTTCTGTTGTGTCCTAGGGTTCAACCTCGAGCGTG 17272117 Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| || | | ||| || ||||| || ||||| Sbjct 17272116 ATGGTCTTCTCCATAAAGGTTTTTACGAAAATCTGCAT 17272079 >seq82 Length=11338420 Score = 102 bits (112), Expect = 6e-17 Identities = 165/232 (71%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167 || || || ||||| | | ||||||||| || ||| |||||| ||||||||||| | | Sbjct 1447564 ATACCTCCCCTCAGACAGAGCACCAGGTGTAGGGTGGACTCCTTCTGGATGTTGTAGTTG 1447505 Query 44168 G-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || | | | | || || |||| ||||| || |||||||||| | |||||| || | Sbjct 1447504 GACGGGGT-GTGTTCATCTTCCAATTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGG 1447446 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 | | | ||||| || ||||| |||| || ||| | ||||||| || || Sbjct 1447445 GGAGATGGCCTCCTTGTCTTGGATCTTGGCCTTC-ATATTCTCAGTGGTGTCACTGGGTT 1447387 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | | || | || || |||| |||||||||||||||| |||||||||||| Sbjct 1447386 CACCGTCGAGGGTGATGGTCTGACCCGTGAGGGTCTTCATGAAGATTTGCAT 1447335 >seq40 Length=22651954 Score = 102 bits (112), Expect = 6e-17 Identities = 163/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167 || || |||| ||| | | ||| ||||| || || ||| ||||||||||| || Sbjct 7366483 ATCCCACCTCGCAGGCGAAGCACTAGGTGCAGGGTAGACTC----TGGATGTTGTAGTCA 7366538 Query 44168 GCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAA 44227 | ||| || | || |||||||| || |||||||| |||| ||||||||| || | Sbjct 7366539 GAGAGAGTTCGGCCATCCTCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGG 7366598 Query 44228 GGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTC 44286 || | || ||||| || || || |||| | ||| | |||||||| || || Sbjct 7366599 GGGATGCCCTCCTTGTCTTGGATTTTG-GCTTTGACATTCTCGATGGTGTCACTGGGCTC 7366657 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||| | || || ||||| || || ||||||||||||||||| ||||| Sbjct 7366658 CACCTCGAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACGAAGATCTGCAT 7366708 >seq126 Length=6421402 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179 |||||||| | || ||||| || ||||||||| ||||||||||| | | || Sbjct 2409821 AGTCTCAATGCAAGATGAAGGATGGACTCCTTTTGAATGTTGTAATCCGACAAAGTACGT 2409880 Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 | | ||||| ||||| || |||||||||| | |||||||| | ||| | |||||| Sbjct 2409881 CCATGTTCCAGTTGCTTACCAGCAAAGATCAGCCCTTGCTGATCAGGAGGAATTCCTTCC 2409940 Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299 || ||| ||||| || | || |||| ||||| | || ||| |||| | || Sbjct 2409941 TTATCCTGGATCTTGGCTTTTACATTTTCTATAGTGTCTGAGGGTTCAGCCTCAAGTGTG 2410000 Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| || || ||||| || ||||| || ||||| Sbjct 2410001 ATGGTCTTCCCTGTAAGGGTTTTTACGAAAATCTGCAT 2410038 >seq117 Length=6347111 Score = 100 bits (110), Expect = 2e-16 Identities = 151/212 (71%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC--GAGT-TGGCGCTCGTCG 44185 || ||||| || ||| |||||| || |||||||| || | |||| |||| | || Sbjct 1554190 ACAAGGTGCAGAGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGAGTGTGGC---CATCT 1554134 Query 44186 TCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCC 44245 ||||||||||| || | |||||| | | ||| || || | ||| | ||||| || ||| Sbjct 1554133 TCCAGCTGCTTGCCTGTAAAGATGAGCCTCTGGTGGTCAGGAGGGATGCCTTCTTTATCC 1554074 Query 44246 GTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 ||||| ||| | | | ||||| || || |||||| |||| || || ||| Sbjct 1554073 TGGATCTTGGCCTTTACATTCTCAATGGTATCACTGGGTTCCACTTCCAGAGTGATGGTC 1554014 Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || |||||||||| |||||||||||| Sbjct 1554013 TTGCCAGTCAGGGTCTTCATGAAGATTTGCAT 1553982 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359971845757293