Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ictidomys_20tridecemlineatus_20[refseq_20GCF_5F000236235.1_202011-
11-29] 12,483 sequences; 2,478,393,770 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq536 288 1e-72
seq59 183 4e-41
seq131 178 2e-39
seq260 174 2e-38
seq58 145 9e-30
seq30 122 1e-22
seq3 120 4e-22
seq64 114 2e-20
seq2 107 2e-18
seq299 98.7 1e-15
>seq536
Length=337149
Score = 288 bits (318), Expect = 1e-72
Identities = 632/944 (67%), Gaps = 40/944 (4%)
Strand=Plus/Plus
Query 23782 TGTTTCTTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTC 23838
|||| ||||||||||| |||| || | |||| ||| ||| | || ||||| ||||
Sbjct 201724 TGTTCATTTAAAAGTCAGCATCCAAGGTAAAAGAATTATCTGTTGGATTCGACATCACTC 201783
Query 23839 CCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATA 23898
||||||| || || || || || | || || || || |||||||| ||||||| ||| |
Sbjct 201784 CCATTTTCTGATACTCGCCTACTCCCTTCTCAAAGAAGTTAGTTTTCCCTTCTAGTGAAA 201843
Query 23899 TATTTTCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCAA-TTCA 23957
|||| ||||| || | ||||||| || || | || | ||||| |||| ||||
Sbjct 201844 TATTCTCCATAAAGTTAAATGGATTTTCTACTTTGAAAATCTTGTTAAAGCCCAGCTTCA 201903
Query 23958 GAAATCAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCT 24017
| | | | |||||||| ||||| || || || ||||||| |||||||| ||
Sbjct 201904 GCA-TAAGCCTATCTGCCACAAATTCAATGTACTGCTTCATCAAAGTGCAATTCATCCCA 201962
Query 24018 ATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTT 24077
|| || || | || | || | || || || || || || || || || | |
Sbjct 201963 ATTAGCTTCTCAGGCAAGGCTTCTGTGAGGAACTCCTGATCTATCTTGAAGGCAT---TG 202019
Query 24078 ATAATAGATC---TTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAA 24134
||||| | | ||||| | | || ||| | | | ||||| | |||||
Sbjct 202020 ATAATTGTTTCTTTTACTCTCTGCTCTGATGGTTTGTGAAGCAGGTGTTTGAGCATCAGG 202079
Query 24135 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 24194
|| || || || ||||||| |||||| ||||| ||||| | ||| |||||||| |||||
Sbjct 202080 CAGGCAAAGTCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGG 202139
Query 24195 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 24254
|| ||||| || || || || || ||||| ||||||||
Sbjct 202140 CCAGGCATCAGTCCTCGTTTCTTGAGCCA----------------------GAAAAGAAG 202177
Query 24255 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATA---ACCGGCGCTGTCATGT 24311
|||| || | || |||||||| | || | ||||||||| | | | ||||
Sbjct 202178 ATTCTGTCCATAGCAGCAAAGGCTACAACACGTTCTCCATAGGTAGCCTCTTTGTCCCCA 202237
Query 24312 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 24371
||| | | ||||| ||| ||||| || |||||||||||||| || | |||||
Sbjct 202238 ATCAAATGCAAGGCCCAT--GGCTTTCTTCTTCACACAAGGCATTGTTTCAGTGGCATTG 202295
Query 24372 AAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATT 24431
|||||| | | |||| || ||||||| ||| || ||||| | |||||||||||||
Sbjct 202296 AAGAGAAATTCCCTTTCTTTGAAGTCTTTAATATAAGTGTCAATAAGAAGACTATACATT 202355
Query 24432 TCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 24491
|| ||||| |||||||| ||||| ||||| || || ||||||| | || || |||||
Sbjct 202356 TCAGAATGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACTGCGGGCTTCTGTAATT 202415
Query 24492 TGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 24551
|| |||||| | |||| | || | ||||| || || ||||| | |||| || |||
Sbjct 202416 TGAACTTCTTGGCTAAATGGCTCCACCAAATTCTCCTTTACTATGCTATCACCTGCCGCA 202475
Query 24552 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCA 24611
| || |||| | || ||||||||||| ||| || || | || | ||| |
Sbjct 202476 GAGAAAGCCAGAATGTG-GATATAAAATATTGTTCCTCAGGCTTCAGGGCTTCCCAGTGC 202534
Query 24612 TTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTA 24671
| || || | || | | |||| || || |||||||||| || ||||| || || |||
Sbjct 202535 TGAATGTCCCTGGA-AGAGCCACCTCCTCAGCTGTCCAAAAGGAAGCCTCAGCTTTCTTA 202593
Query 24672 TACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 24715
|||| | || ||| |||| | || || ||||| || || ||
Sbjct 202594 CACATCTGCCGGATACCATGGTGTTCCATAGGAAAGATGACCAA 202637
>seq59
Length=10161055
Score = 183 bits (202), Expect = 4e-41
Identities = 377/557 (68%), Gaps = 13/557 (2%)
Strand=Plus/Minus
Query 24148 AGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGC 24207
|||||| |||||||||||| || || | ||| |||||||| ||||| || ||||| ||
Sbjct 9902958 AGTGTAAACCCTCGTCTCTGCTGATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTT 9902899
Query 24208 CACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTC--TAC 24265
| || | ||||||||||| || |||||||| ||||||||||| ||| || | ||
Sbjct 9902898 C-----TTATGAGCCAAAATATTGATGCAAATGAGCCAGAAAAGAAGATTTCTCCCGTAG 9902844
Query 24266 TGCCGCAAAGGCAATAAGTCTTTCTCCATA---ACCGGCGCTGTCATGTATCCACTTTTG 24322
|| || ||| | | || | || || || | | | |||| ||||
Sbjct 9902843 TG--GCCAAGACTACAACACGTTTTCTGTAGGTAGCTTCTTTGTCCCCAGTCCAACACAA 9902786
Query 24323 AGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtt 24382
|| || || || ||||| || || |||||||| | || || ||| | ||||| | |
Sbjct 9902785 GGCACAGTCTGCTTTCTTCTTCACCCAAGGCATCATTTCAATGGCACTGGAGAGAAATTC 9902726
Query 24383 tttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAAT 24442
| || | || ||||| || | ||||| | |||| ||| ||||| ||||| ||
Sbjct 9902725 CCTGTCTTAGGAATTTTTAATGTAAATGTCAATAAGGAGACCATATATTTCAGAATGTAT 9902666
Query 24443 GTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTAT 24502
|||||| || || | ||| || || ||||||| | || || |||| || || |||
Sbjct 9902665 GTTTTCCATAGCAACTTGGAAGCCACAGAAACAGCCGGCTTCTATAATTTGAACCTCTTG 9902606
Query 24503 ACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAA 24562
| |||||| | | | ||||||| | |||| || |||| ||| |||| || || |
Sbjct 9902605 GCTAAATCGCTGCACCAGATTTTCACTTGCTATGCCATCACGTGCTTCAAAGAAAGCTAG 9902546
Query 24563 TACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTT 24622
|||||| |||||||||| ||| || || | || | || | | | || ||
Sbjct 9902545 AACATGTGATATAAAATATCATTCCTCAGGCTTCAGGGCCTGCCGGTGCTGACTGTCCTT 9902486
Query 24623 AGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCA 24682
|| | |||||| || ||| ||||||| || || ||||| || || |||||||| | |||
Sbjct 9902485 GGAAAGATCCACCTCCTCCGCTGTCCAGAAGGACGCCTCGGCTTTCTTATACATTTGCCA 9902426
Query 24683 GATGTCATGAT-ATTGA 24698
|| ||||| | |||||
Sbjct 9902425 AATATCATGGTGATTGA 9902409
>seq131
Length=5549739
Score = 178 bits (196), Expect = 2e-39
Identities = 266/376 (71%), Gaps = 4/376 (1%)
Strand=Plus/Minus
Query 24220 GCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAA 24279
|||| ||||| ||| |||| || ||||||||||| |||||||| | | |||||||| |
Sbjct 3233252 GCCAGAATATTGACACAAAAGAACCAGAAAAGAAGATTCCTTCCGCAGTGGCAAAGGCTA 3233193
Query 24280 TAA---GTCTTTCTCCATAACCGGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCT 24336
|| || || | || || | ||| ||||| | |||||||| || |
Sbjct 3233192 AAACATGTTCTTGTAGGTAGCCT-CTTTGTTCCCAATCCAACTCAAGGCCCAATCTGCTT 3233134
Query 24337 TCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTAT 24396
|| | || ||||||||||| | || |||||||| ||||| | | |||| ||| ||
Sbjct 3233133 TCCTCTTCACACAAGGCATCCTTTCAATAGCATTGGAGAGAAATTCCCTTTCTTTAGAAT 3233074
Query 24397 CTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCA 24456
|||||| || || ||||| | ||||| ||||||| ||||| |||||||| |||| |
Sbjct 3233073 CTTTAATGTAAGTGTCAATAAGGAGACTCTACATTTTAGAATGCATGTTTTCTGTGGCAA 3233014
Query 24457 TTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTCTG 24516
|| || || |||||||| | | || ||||| || |||||| | |||| |||
Sbjct 3233013 CCTGGAAGCCATAGAAACAGCCCACTTCTGTAATTTGAACTTCTTGGCTAAATTATTCCA 3232954
Query 24517 CTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAA 24576
| ||||||||||| |||| || ||||| |||||||| || |||| ||| | |||||
Sbjct 3232953 CCAAATTTTCATTTGCTATGCCATCACTTGCTGCAAAGAAAGCCAGGACAAGCAATATAA 3232894
Query 24577 AATATTTTTCGTCTGG 24592
||||| ||| || ||
Sbjct 3232893 AATATCGTTCCTCAGG 3232878
>seq260
Length=2306558
Score = 174 bits (192), Expect = 2e-38
Identities = 400/599 (67%), Gaps = 10/599 (2%)
Strand=Plus/Plus
Query 24120 TGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCG 24179
||||| ||||||| || || | || | ||| |||||| ||||| ||||| | |||
Sbjct 2180269 TGTTTGAACATCAGGCAAGCAGAGTCATAAAGTAAACCCTCATCTCTGCTAATAAGTTCA 2180328
Query 24180 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAAT 24239
|||||| | || || ||||| | || | || || | | | ||||| || ||||
Sbjct 2180329 CTGGAAAC--TTAGGCCAGGCATCAATCCCTGTTTCTTGAACTAGAATATTGATTCAAAA 2180386
Query 24240 GATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATA---A 24296
|| || | ||||| ||||||| || ||| ||||||| | || | ||||| || |
Sbjct 2180387 GAAACATAGAAGAAGTTTCCTTCCACAGCCACAAAGGCTACAACACATTCTCTGTAGGTA 2180446
Query 24297 CCGGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATT 24356
| | |||| ||||| | || ||| || || || |||||| ||||||||
Sbjct 2180447 GCTTCTTTGTCCCCAATCCAATGCAAGACCTAATTTGCTTTTTTCTTTACATAAGGCATT 2180506
Query 24357 GTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATC 24416
|| || || ||||| |||||| | | |||| || |||||| || || |||||
Sbjct 2180507 GTTTCAATGGCATTGAAGAGAAATTCCCTTTCTTTGAAATCTTT----TAAGTGTCAATA 2180562
Query 24417 AAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACAT 24476
| |||||||||||||| |||| | |||||| |||| ||||| || | ||||||||
Sbjct 2180563 AGGAGACTATACATTTCACAATGTAGTTTTTCA-TGGCAATTTGGAAGTCATAGAAACAG 2180621
Query 24477 CTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATT 24536
| | || ||||| || ||||| | |||| || | ||||||||||| |||||
Sbjct 2180622 TGAACTTCTGTAATTTGAACTTCCTGGCTTAATCACTCCACCAAATTTTCATTTACTATG 2180681
Query 24537 CCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT 24596
|| ||||| |||||||| || || | ||| ||||||||| ||| || | | |
Sbjct 2180682 CCATCACTTGCTGCAAAGAAATTCATAATATGAGACATAAAATATCATTCCTCAGATTTC 2180741
Query 24597 AGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGAT 24656
|| | | | | || || || || ||| |||| || | |||| |||| ||
Sbjct 2180742 AGGGCTTCCTAGTGCAGAATGTCCTTGGAAATAGCCACCTCCCCATATGTCAAAAAGGAA 2180801
Query 24657 GCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 24715
| || ||||| ||| | || | ||| || ||||| ||| || ||||| | |||||
Sbjct 2180802 CCTTCAGCCTTCTTAGAAATCTGCCAAATATCATGGTATCTGATAGGAAAGAAGACAAA 2180860
>seq58
Length=10378366
Score = 145 bits (160), Expect = 9e-30
Identities = 291/426 (68%), Gaps = 23/426 (5%)
Strand=Plus/Plus
Query 24158 CTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTT 24217
||| ||||| ||||| | ||| |||||||| ||||| || ||||| || | | || ||
Sbjct 1968820 CTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGACCAGGCATCAGCCGTCATTTCTT 1968879
Query 24218 AAGCCAAAATATG--GACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAG 24275
||| || ||||| || ||||| || ||||||||||| ||| |||| || ||||||
Sbjct 1968880 AAGTCAGAATATATTGATGCAAAAGAACCAGAAAAGAAGATTTCTTCCACATTAGCAAAG 1968939
Query 24276 GCAATAAGTCTT--TCTCCATAACCGGCGCTGTCATGTATCCACTTTTGAGCCCAATCGG 24333
|| | | || | |||||| || | | | ||||| || || |||| |
Sbjct 1968940 GCTACA--TCATGCTCTCCACAAATAGACTTTT----TATCCTGATT----CCAAATCTG 1968989
Query 24334 CCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTAC 24393
||||| || ||||||||||| | || | |||| |||| | | | |||||| ||
Sbjct 1968990 TTTTCTTCTTCACACAAGGCATCATTTCAGTGCCATTGAAGATAAATTCTTTTTCTTTGG 1969049
Query 24394 TATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGG 24453
|| |||| |||| |||| | | ||| || ||| | ||||| || ||| | ||||
Sbjct 1969050 AATTTTTA----ATGTGACAATAAGGAAACTGTATATTACAGAATGTATTTTTCCTATGG 1969105
Query 24454 CCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTT 24513
| ||||| ||||| |||||||| || || ||||| || | |||| | |||| | |
Sbjct 1969106 CAATTTGGAATCCATAGAAACAGTGGGCTTCTGTAATTTGAATTTCTTGGCTAAATTGCT 1969165
Query 24514 CTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTA 24573
| || ||||||| | ||| || |||| |||| |||| |||| |||||| ||
Sbjct 1969166 TCACCAATTTTTCATGTATTATGCCATCAC---CTGCTAAAA--GCCAGAACATGTGCTA 1969220
Query 24574 TAAAAT 24579
||||||
Sbjct 1969221 TAAAAT 1969226
>seq30
Length=14751797
Score = 122 bits (134), Expect = 1e-22
Identities = 109/137 (80%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 53150 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 53209
|| ||||||||||| ||||| ||||| ||||| || ||||| ||||| || ||||| |
Sbjct 820281 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTATAGATATTGCTGGTGTAAGGTTCAATG 820340
Query 53210 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 53269
||||||||||| |||| || ||||||||||| ||||| ||||| || || | | ||||
Sbjct 820341 GACTCATTATTCCCCAGGATCTGAGCAGTTGAAGCAGTAGGCATCGGGGCAATAAGTAAA 820400
Query 53270 CTATTTCTAAGACCGTA 53286
|| ||||| | ||| ||
Sbjct 820401 CTGTTTCTTACACCATA 820417
Score = 114 bits (126), Expect = 2e-20
Identities = 117/153 (76%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 54025 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCT 54084
|| ||| |||||||| |||||||| |||||||||||||| | || ||||| |||| ||
Sbjct 832087 CTCCACCCGTTTCATGAAGAGATCTGGAATCCAAAGAGCAAAGAAAAGATCCCTGGCTCG 832146
Query 54085 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 54144
|| ||||| |||||||| ||||| || | ||| |||||| | | || || |||||||
Sbjct 832147 CTGCTCCTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAACTCAAAGATGTCTAAATGCCA 832206
Query 54145 CGGTTCCAAGTATATGGTCATAACTCCAGGCCG 54177
||||||| ||| || | | ||||||| ||
Sbjct 832207 AGGTTCCAGGTAAATAGCAAATGCTCCAGGACG 832239
Score = 105 bits (116), Expect = 8e-18
Identities = 123/166 (74%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 54768 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAA 54827
|||| |||| ||| |||||||||||||| | || || || || ||||| || || | |
Sbjct 843145 CACTGAATACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACAGCAATTCTTGCTGCCAAGA 843204
Query 54828 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGTCAGAGTGTCCA 54887
||||||| || || || | ||||| | || || ||| |||| || | |||||| || |
Sbjct 843205 TGGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAGAGTATCTA 843264
Query 54888 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 54933
||| || || || |||||| | |||| |||||||| || |||||
Sbjct 843265 GTTCCACTGTGGTAACTCCACTGTATAAGCCTTGGATTACTTTCAT 843310
>seq3
Length=41493964
Score = 120 bits (132), Expect = 4e-22
Identities = 151/207 (73%), Gaps = 3/207 (1%)
Strand=Plus/Plus
Query 21931 TTGTACTTCTTTCAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATC 21990
||| ||||||| | ||||||||| | || |||| | | || ||||| ||||||| |||
Sbjct 8287232 TTGAACTTCTTCTATATCTGGATAAAAAATCCGTTCACAAATGAGCTGTGCTATTCGATC 8287291
Query 21991 CCCCGTATTTACATTAAATGTATATTTTCCATTATTAATAAGAATGACTCCTATATTTCC 22050
|| | ||||| | ||| | | ||| ||| ||||| | | || || ||||||||
Sbjct 8287292 ACCTTTTTTTACTTCAAACTTCTCTTTACCAAAATTAAACAACACAACACCAATATTTCC 8287351
Query 22051 CCTATAATCTTCGTCTATTACACCGCCTCCTATATCAAT---GCCTTTTAGGGACAGACC 22107
||||||||||| ||||| ||||| |||||| ||| || | |||| | ||| ||
Sbjct 8287352 TCTATAATCTTCATCTATGACACCAGCTCCTACATCTATGAAGTATTTTGCAGCCAGGCC 8287411
Query 22108 AGACCTAGGAGCTATTCTACCATAGCA 22134
||| | ||||||||||| ||||||||
Sbjct 8287412 AGAACGTGGAGCTATTCTTCCATAGCA 8287438
>seq64
Length=9676502
Score = 114 bits (126), Expect = 2e-20
Identities = 107/136 (79%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 24157 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 24216
|||| ||||| ||||| | ||| |||||||| ||||| || ||||| || || || || |
Sbjct 6351547 CCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 6351488
Query 24217 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 24276
| ||||| ||||| || ||||| || ||||||||||| ||||| || || || |||||||
Sbjct 6351487 TGAGCCAGAATATTGAAGCAAAAGAACCAGAAAAGAAGATTCCCTCCACAGCAGCAAAGG 6351428
Query 24277 CAATAAGTCTTTCTCC 24292
| | || | ||||||
Sbjct 6351427 CTACAACACGTTCTCC 6351412
Score = 93.3 bits (102), Expect = 5e-14
Identities = 92/119 (77%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 24396 TCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCC 24455
||||||| || || ||||| | |||||||||||||| ||||| |||||||| |||||
Sbjct 6349677 TCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGCA 6349618
Query 24456 ATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTC 24514
||||| || || |||||||| | || || |||| || |||||| | |||||| ||
Sbjct 6349617 ATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAACTTGAACTTCTTGGCTAAATCGCTC 6349559
>seq2
Length=46620681
Score = 107 bits (118), Expect = 2e-18
Identities = 104/134 (78%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 24159 TCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 24218
|| ||||| || || | ||| |||||||| ||||| || ||||| || || | ||| ||
Sbjct 41377775 TCATCTCTGCTGATCAGTTCATTGGAAAATGTGAGCCCAGGCATGAGACCTCTCTTCTTT 41377716
Query 24219 AGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCA 24278
||||| ||||| | ||||| ||||| || |||||||||||||| || || ||||||||
Sbjct 41377715 AGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCCTTCCACAGCAGCAAAGGCC 41377656
Query 24279 ATAAGTCTTTCTCC 24292
| | |||||| ||
Sbjct 41377655 ACCACTCTTTCCCC 41377642
Score = 86.0 bits (94), Expect = 7e-12
Identities = 70/85 (82%), Gaps = 0/85 (0%)
Strand=Plus/Minus
Query 24633 ACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGA 24692
|| ||||| ||||||| || ||||||| ||||| ||||||||| ||||| || ||| |
Sbjct 41366933 ACCTCTTCTGCTGTCCAGAAGGATGCCTGTGCCTGTTTATACATTTTCCAAATATCAGGG 41366874
Query 24693 TATTGAATTGGAAAAATAACAAATC 24717
|| || ||||||||||| |||||||
Sbjct 41366873 TACTGGATTGGAAAAATGACAAATC 41366849
>seq299
Length=1791600
Score = 98.7 bits (108), Expect = 1e-15
Identities = 107/142 (75%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 24575 AAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCAC 24634
|||||| || || |||| | | || || ||| | | | || ||| || |||| || ||
Sbjct 1082285 AAAATAATTCTCATCTGATTTAAGCTTGTTCTAGTGAAGGAGATCCTTTGATAAGTCAAC 1082226
Query 24635 TTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATA 24694
||||| ||||||| || ||||||| ||||| || |||||| ||||| || ||| | ||
Sbjct 1082225 CTCTTCTGCTGTCCAGAAGGATGCCTGTGCCTGTTCATACATTTTCCAAATATCAGGGTA 1082166
Query 24695 TTGAATTGGAAAAATAACAAAT 24716
||||||||||| || ||||||
Sbjct 1082165 CTGAATTGGAAATATGACAAAT 1082144
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
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