Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ictidomys_20tridecemlineatus_20[refseq_20GCF_5F000236235.1_202011-
11-29] 12,483 sequences; 2,478,393,770 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq128 295 8e-75
seq82 178 2e-39
seq89 165 1e-35
seq394 116 4e-21
>seq128
Length=5608787
Score = 295 bits (326), Expect = 8e-75
Identities = 590/857 (69%), Gaps = 23/857 (3%)
Strand=Plus/Plus
Query 9509 TGGGCAATATCTTAGTGGTGATTATTGTCATAAGATACATGAAGATCAAAAACCTCACTA 9568
||||||| | | |||||| | || ||| | ||| || | |||| | | || |
Sbjct 223820 TGGGCAACGTGGTGGTGGTGCTGATCCTCACCAAGTACCGGAGGCTCAAGGTCATGACCA 223879
Query 9569 ACATGTTACTGTTAAACTTGGCAATATCTGACTTGCTATTTCTTTTAACTTTGCCATTTT 9628
|||| | ||| | ||| |||| || ||||||||||| ||||| || ||| | || || |
Sbjct 223880 ACATCTATCTGCTCAACCTGGCGATTTCTGACTTGCTCTTTCTCTTCACTCTTCCCTTCT 223939
Query 9629 GGATGCACTATATTGGAATGTATCATGATTGGACTTTTGGTATTTCCCTGTGTAAACTGC 9688
|||| ||||| |||| || | | || ||| ||||||| || | |||| || || |
Sbjct 223940 GGATCCACTACGTTGGG-TGGAAC--GAGTGGGTTTTTGGTCCTTTCATGTGCAAGCTCC 223996
Query 9689 TCAGGGGTGTGTGTTACATGTCACTGTACAGCCAGGTCTTTTGCATCATCCTGCTAACAG 9748
|| ||| | | |||| || |||||||| || |||||| |||||||||||| ||
Sbjct 223997 TCTCGGGGTTTTATTACCTGGGCTTGTACAGCGAGATCTTTTTCATCATCCTGCTGACCA 224056
Query 9749 TAGACAGGTATCTAGCTGTTGTCTATGCTGTAACTGC--TTTGAGGTTTAGAACAGTAAC 9806
| |||||||| || || | ||| | || || ||| || ||| | || || ||
Sbjct 224057 TCGACAGGTACCTGGCCATCGTCCACGCCGTGTTTGCCCTTCGAGCCC--GGACGGTGAC 224114
Query 9807 CTGTGGCATAGTTACCTGTGTATGTACCTGGTTTCTGGCAGGGTTGTTGTCCCTCCCTGA 9866
| || | | | | | | |||||| | ||||||| | || | ||||||| ||
Sbjct 224115 TTTCGGTGTCAGCAGCAGCATCTTCACCTGGGTCCTGGCAGTGCTGGCGGCCCTCCCCGA 224174
Query 9867 ATTTTTCTTTCATGGACACCAAGATGACAATGGTAGGGTTCAGTGTGA--TCCTTACTAC 9924
|||| ||||||| | |||| | | | | || || | || || |||| ||||
Sbjct 224175 ATTTATCTTTCACGAGTCCCAACAGGGCTCCGA-AGAGT-CTGTCTGCAGTCCTCTCTAC 224232
Query 9925 CCAGAG-ATGTCTACAAATGTTTGGAGGCGCGCCCACGTTGCAAAGGTGATTATGTTAAG 9983
|||||| | | | | | | ||| ||| ||| | | | ||| || || |
Sbjct 224233 CCAGAGGACGAGGAAGACAGCT-GGAAGCGTTTCCATGCTCTGAGAATGAACATCTTGGG 224291
Query 9984 TCTCATTTTGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGTT 10043
||| | ||||||||||| ||||| |||||||||| || || |||| || ||| |
Sbjct 224292 TCTAGCGCTCCCTCTGCTCATCATGGCCGTCTGCTACTCTGGGATCATCAAAACCCTGCT 224351
Query 10044 GAGGCGCCCCAGCAAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGC 10103
||| |||||| || || ||||||||||||||| ||||||| ||| ||||||||||||
Sbjct 224352 GAGATGCCCCAACAGAAAAAAGTACAAGGCCATCCGGCTCATTTTTATCATCATGGTGGT 224411
Query 10104 CTATTTTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAAC 10163
|| ||| ||||| ||||| ||||||||| | |||||||| || ||| | ||||| |
Sbjct 224412 CTTTTTCGTTTTCTGGACCCCCTACAACCTGGTTCTCCTTCTCTCTGCTTTTCAAATGAA 224471
Query 10164 CCTTCTTAACCTGCAG-TGTGCATTGAGCAGTA---ACTTGGACATGGCTCTGCTGATAA 10219
| | || | | ||| |||| | |||||| | ||||| |||| ||| | | |
Sbjct 224472 CTTACTGGA-GTACAGCTGTG---AGCGCAGTAGACATCTGGACCTGGCCATGCAGGTGA 224527
Query 10220 CAAAAACAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGG 10279
| | | ||||| || ||||| ||| ||||||| || |||||||| |||||||| |
Sbjct 224528 CGGAGGTGATCGCCTATACCCACTGCTGCGTCAACCCTGTCATCTACGCCTTCGTGGGCG 224587
Query 10280 AGAAGTT-TAGAAGACACCTGTACCACTTCTTCCACACCTACGTGGCCATCTACCTCTGC 10338
||| ||| |||| | ||||| |||||||||||||| |||||||||||||||| ||
Sbjct 224588 AGAGGTTCCAGAA-ATACCTGCGCCACTTCTTCCACAGGCACGTGGCCATCTACCTGGGC 224646
Query 10339 AAGTACATCCCCTTCCT 10355
|| |||||||| |||||
Sbjct 224647 AAATACATCCCATTCCT 224663
Score = 295 bits (326), Expect = 8e-75
Identities = 590/857 (69%), Gaps = 23/857 (3%)
Strand=Plus/Plus
Query 176395 TGGGCAATATCTTAGTGGTGATTATTGTCATAAGATACATGAAGATCAAAAACCTCACTA 176454
||||||| | | |||||| | || ||| | ||| || | |||| | | || |
Sbjct 223820 TGGGCAACGTGGTGGTGGTGCTGATCCTCACCAAGTACCGGAGGCTCAAGGTCATGACCA 223879
Query 176455 ACATGTTACTGTTAAACTTGGCAATATCTGACTTGCTATTTCTTTTAACTTTGCCATTTT 176514
|||| | ||| | ||| |||| || ||||||||||| ||||| || ||| | || || |
Sbjct 223880 ACATCTATCTGCTCAACCTGGCGATTTCTGACTTGCTCTTTCTCTTCACTCTTCCCTTCT 223939
Query 176515 GGATGCACTATATTGGAATGTATCATGATTGGACTTTTGGTATTTCCCTGTGTAAACTGC 176574
|||| ||||| |||| || | | || ||| ||||||| || | |||| || || |
Sbjct 223940 GGATCCACTACGTTGGG-TGGAAC--GAGTGGGTTTTTGGTCCTTTCATGTGCAAGCTCC 223996
Query 176575 TCAGGGGTGTGTGTTACATGTCACTGTACAGCCAGGTCTTTTGCATCATCCTGCTAACAG 176634
|| ||| | | |||| || |||||||| || |||||| |||||||||||| ||
Sbjct 223997 TCTCGGGGTTTTATTACCTGGGCTTGTACAGCGAGATCTTTTTCATCATCCTGCTGACCA 224056
Query 176635 TAGACAGGTATCTAGCTGTTGTCTATGCTGTAACTGC--TTTGAGGTTTAGAACAGTAAC 176692
| |||||||| || || | ||| | || || ||| || ||| | || || ||
Sbjct 224057 TCGACAGGTACCTGGCCATCGTCCACGCCGTGTTTGCCCTTCGAGCCC--GGACGGTGAC 224114
Query 176693 CTGTGGCATAGTTACCTGTGTATGTACCTGGTTTCTGGCAGGGTTGTTGTCCCTCCCTGA 176752
| || | | | | | | |||||| | ||||||| | || | ||||||| ||
Sbjct 224115 TTTCGGTGTCAGCAGCAGCATCTTCACCTGGGTCCTGGCAGTGCTGGCGGCCCTCCCCGA 224174
Query 176753 ATTTTTCTTTCATGGACACCAAGATGACAATGGTAGGGTTCAGTGTGA--TCCTTACTAC 176810
|||| ||||||| | |||| | | | | || || | || || |||| ||||
Sbjct 224175 ATTTATCTTTCACGAGTCCCAACAGGGCTCCGA-AGAGT-CTGTCTGCAGTCCTCTCTAC 224232
Query 176811 CCAGAG-ATGTCTACAAATGTTTGGAGGCGCGCCCACGTTGCAAAGGTGATTATGTTAAG 176869
|||||| | | | | | | ||| ||| ||| | | | ||| || || |
Sbjct 224233 CCAGAGGACGAGGAAGACAGCT-GGAAGCGTTTCCATGCTCTGAGAATGAACATCTTGGG 224291
Query 176870 TCTCATTTTGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGTT 176929
||| | ||||||||||| ||||| |||||||||| || || |||| || ||| |
Sbjct 224292 TCTAGCGCTCCCTCTGCTCATCATGGCCGTCTGCTACTCTGGGATCATCAAAACCCTGCT 224351
Query 176930 GAGGCGCCCCAGCAAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGC 176989
||| |||||| || || ||||||||||||||| ||||||| ||| ||||||||||||
Sbjct 224352 GAGATGCCCCAACAGAAAAAAGTACAAGGCCATCCGGCTCATTTTTATCATCATGGTGGT 224411
Query 176990 CTATTTTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAAC 177049
|| ||| ||||| ||||| ||||||||| | |||||||| || ||| | ||||| |
Sbjct 224412 CTTTTTCGTTTTCTGGACCCCCTACAACCTGGTTCTCCTTCTCTCTGCTTTTCAAATGAA 224471
Query 177050 CCTTCTTAACCTGCAG-TGTGCATTGAGCAGTA---ACTTGGACATGGCTCTGCTGATAA 177105
| | || | | ||| |||| | |||||| | ||||| |||| ||| | | |
Sbjct 224472 CTTACTGGA-GTACAGCTGTG---AGCGCAGTAGACATCTGGACCTGGCCATGCAGGTGA 224527
Query 177106 CAAAAACAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGG 177165
| | | ||||| || ||||| ||| ||||||| || |||||||| |||||||| |
Sbjct 224528 CGGAGGTGATCGCCTATACCCACTGCTGCGTCAACCCTGTCATCTACGCCTTCGTGGGCG 224587
Query 177166 AGAAGTT-TAGAAGACACCTGTACCACTTCTTCCACACCTACGTGGCCATCTACCTCTGC 177224
||| ||| |||| | ||||| |||||||||||||| |||||||||||||||| ||
Sbjct 224588 AGAGGTTCCAGAA-ATACCTGCGCCACTTCTTCCACAGGCACGTGGCCATCTACCTGGGC 224646
Query 177225 AAGTACATCCCCTTCCT 177241
|| |||||||| |||||
Sbjct 224647 AAATACATCCCATTCCT 224663
Score = 114 bits (126), Expect = 2e-20
Identities = 213/307 (69%), Gaps = 12/307 (4%)
Strand=Plus/Plus
Query 9992 TGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCC 10051
|||| |||||| | |||| ||||||||| | || | |||| ||| | || | |
Sbjct 296424 TGCCCCTGCTCGTCATGGTCATCTGCTACTCGGGGATCCTGAGAACCCTGCTTCGGTGTC 296483
Query 10052 CCAGCAAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATTTTG 10111
||| |||||| ||||||| | ||||||||||| ||||||| | | ||| |||
Sbjct 296484 GGAGCGAGAAGAGACACAAGGCTGTGAGGCTCATCTTCACCATCATGATCGTCTACTTTC 296543
Query 10112 TTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCTTCTTA 10171
|||| ||| | ||||||||||| || ||||| ||| | ||||| || | || || ||
Sbjct 296544 TTTTCTGGGCTCCCTACAACATCGTCCTCCTCCTGACCACCTTCCA-GGAATTCT--TTG 296600
Query 10172 ACCTG---CAGTGTGCATTGAGCAGTAAC---TTGGACATGGCTCTGCTGATAACAAAAA 10225
|||| | |||| || || |||| ||||| || ||| | | || | |
Sbjct 296601 GCCTGAATAACTGTG-AT--AGTTCTAACAGACTGGACCAAGCCATGCAGGTGACCGAGA 296657
Query 10226 CAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAAGT 10285
| | | || ||||||||||||||||| || |||||||| ||||| ||||||||||
Sbjct 296658 CTCTCGGGATGACGCACTGTTGCATCAACCCTGTCATCTACGCCTTCGTCGGGGAGAAGT 296717
Query 10286 TTAGAAG 10292
| |||||
Sbjct 296718 TCAGAAG 296724
Score = 114 bits (126), Expect = 2e-20
Identities = 213/307 (69%), Gaps = 12/307 (4%)
Strand=Plus/Plus
Query 176878 TGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCC 176937
|||| |||||| | |||| ||||||||| | || | |||| ||| | || | |
Sbjct 296424 TGCCCCTGCTCGTCATGGTCATCTGCTACTCGGGGATCCTGAGAACCCTGCTTCGGTGTC 296483
Query 176938 CCAGCAAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATTTTG 176997
||| |||||| ||||||| | ||||||||||| ||||||| | | ||| |||
Sbjct 296484 GGAGCGAGAAGAGACACAAGGCTGTGAGGCTCATCTTCACCATCATGATCGTCTACTTTC 296543
Query 176998 TTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCTTCTTA 177057
|||| ||| | ||||||||||| || ||||| ||| | ||||| || | || || ||
Sbjct 296544 TTTTCTGGGCTCCCTACAACATCGTCCTCCTCCTGACCACCTTCCA-GGAATTCT--TTG 296600
Query 177058 ACCTG---CAGTGTGCATTGAGCAGTAAC---TTGGACATGGCTCTGCTGATAACAAAAA 177111
|||| | |||| || || |||| ||||| || ||| | | || | |
Sbjct 296601 GCCTGAATAACTGTG-AT--AGTTCTAACAGACTGGACCAAGCCATGCAGGTGACCGAGA 296657
Query 177112 CAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAAGT 177171
| | | || ||||||||||||||||| || |||||||| ||||| ||||||||||
Sbjct 296658 CTCTCGGGATGACGCACTGTTGCATCAACCCTGTCATCTACGCCTTCGTCGGGGAGAAGT 296717
Query 177172 TTAGAAG 177178
| |||||
Sbjct 296718 TCAGAAG 296724
Score = 95.1 bits (104), Expect = 1e-14
Identities = 558/880 (63%), Gaps = 15/880 (2%)
Strand=Plus/Minus
Query 176373 CTTGTGTTTCTCTTTGGGTTGTTGGGCAATATCTTAGTGGTGATTATTGTCATAAGATAC 176432
|| || ||| || | || ||| | ||||| ||| | ||||| || | |||| ||
Sbjct 179009 CTGGTCTTTGTCATCGGCTTGATTGGCAACATCCTGGTGGTCCTTGTCCTCATGCAGCAC 178950
Query 176433 ATGAAGATCAAAAACCTCACTAACATGTTACTGTTAAACTTGGCAATATCTGACTTGCTA 176492
| || | || ||| | | || | ||| | || | || |||| || |||||| ||||
Sbjct 178949 AGGAGGCTCCAAAGCATGACCAGCATCTACCTCCTCAATCTGGCCATCTCTGACCTGCTC 178890
Query 176493 TTTCTTTTAACTTTGCCATTTTGGATGCACTATAT-TGGAATGTATCATGATTGGACTTT 176551
|| || || || |||| || ||||| |||| | | ||| | || ||| |||
Sbjct 178889 TTCCTCTTCACGCTGCCCTTCTGGATTGACTACAAGTTGAAG--AACAGC--TGGGTTTT 178834
Query 176552 TGGTATTTCCCTGTGTAAACTGCTCA-GGGGTGTGTGTTACATGTCACTGTACAGCCAGG 176610
|||| | || |||| || ||||| ||||| | | |||| || |||||||| ||
Sbjct 178833 CGGTAGTGCCATGTGCAAGCTGCTTTCGGGGTCT-TATTACCTGGGCTTGTACAGCGAGA 178775
Query 176611 TCTTTTGCATCATCCTGCTAACAGTAGACAGGTATCTAGCTGTTGTCTATGCTGTAACTG 176670
|||||| |||||||||||| || | |||||||| || || | ||| ||||||| ||
Sbjct 178774 TCTTTTTCATCATCCTGCTGACCATCGACAGGTACCTGGCCATCGTCCATGCTGTGTTTG 178715
Query 176671 CTTTGAGGTTTAGAACAGTAACCTGTGGCATAGTTACCTGTGTATGTACCTGGTTTCTGG 176730
| | || | | || || |||| |||||| | ||| | | |||||| ||||
Sbjct 178714 CAATACGGGCTCGGACTGTCACCTTTGGCATCATCACCAGCATCGTCACCTGGGCCCTGG 178655
Query 176731 CAGGGTTGTTGTCCCTCCCTGAATTTTTCTTTCATGGACACCAAGATGACAATGGTAGGG 176790
| || || |||||| |||| | ||| || ||| || | | ||
Sbjct 178654 CCCTCCTGGCTGCCGTCCCTGGCTTTTAC-TTCTCCGAGACCCAGTGGGAGTTCACCCGG 178596
Query 176791 TTCAGTGTGATCCT-TACTACC--CAGAGATGTCTACAAATGTTTGGAGGCGCGCCCACG 176847
|| | ||| ||| || || | | || |||| | ||||| ||| ||| |
Sbjct 178595 AACACCTGCAGCCTCCACTTCCCTCACCAAAGCCT-CAAA-GAATGGAGACGCTTCCAGG 178538
Query 176848 TTGCAAAGGTGATTATGTTAAGTCTCATTTTGCCTCTGCTCATTATGGCTGTCTGCTACT 176907
| || ||| || | | || || |||| ||| | | ||| |||||||||
Sbjct 178537 CTCTGAAACTGAACATCCTGGGGCTGGTTCTGCCCCTGTTGGTCATGATCGTCTGCTACA 178478
Query 176908 ATGTAATTATCAGAAGACTGTTGAGGCGCCCCAGCAAGAAGAAGTACAAGGCCATCAGGC 176967
| || |||| | ||| | || || |||| |||||||| |||||| || |
Sbjct 178477 CGGGGATCATCAATATTCTGCTCAGTCGGCCCAATGAGAAGAAGGCTAAGGCCGTCCGCT 178418
Query 176968 TCATCTTTGTCATCATGGTGGCCTATTTTGTTTTTTGGACACCCTACAACATTGTTCTCC 177027
| || |||||||||||| | ||| || | |||||||| || |||||| | | |
Sbjct 178417 TGATTTTTGTCATCATGCTCACCTTCTTCCTCTTTTGGACCCCTTACAACCTGACTATGT 178358
Query 177028 TACTGTCTACCTTTCACGCAACCCTTCTTAACC-TGCAGTGTGCATTGAGCAGTAACTTG 177086
| | ||| | || || | | | | | || ||| ||||||| |||||| | ||
Sbjct 178357 TTGTCTCTGCTTTCCAAG-AGCACCTGTTCACCAACCAGTGTGTGCAGAGCAGGGAGCTG 178299
Query 177087 GACATGGCTCTGCTGATAACAAAAACAGTAGCCTACACACACTGTTGCATCAACCCAGTG 177146
|||||||| | | | | || | | |||||||| ||||| || ||||||| ||
Sbjct 178298 GACATGGCCATTCAGGTGACCGAGGTGATCGCCTACACTCACTGCTGTGTCAACCCCGTC 178239
Query 177147 ATCTACGCGTTCGTGGGGGAGAAGTTTAGAAGACACCTGTACCACTTCTTCCACACCTAC 177206
||||| | || ||||| || ||| | | |||| ||| || ||||||| ||
Sbjct 178238 ATCTATGTCTTTGTGGGCCAGCGGTTCCGGAAGTACCTCCGCCAGTTGTTCCACAGGCAC 178179
Query 177207 GTGGCCATCTACCTCTGCAAGTACATCCCCTTCCTGTCTG 177246
|||||| | |||| ||||| | |||||||| ||||
Sbjct 178178 GTGGCCGTGCACCTGGCCAAGTGGCTGCCCTTCCTCTCTG 178139
Score = 95.1 bits (104), Expect = 1e-14
Identities = 558/880 (63%), Gaps = 15/880 (2%)
Strand=Plus/Minus
Query 9487 CTTGTGTTTCTCTTTGGGTTGTTGGGCAATATCTTAGTGGTGATTATTGTCATAAGATAC 9546
|| || ||| || | || ||| | ||||| ||| | ||||| || | |||| ||
Sbjct 179009 CTGGTCTTTGTCATCGGCTTGATTGGCAACATCCTGGTGGTCCTTGTCCTCATGCAGCAC 178950
Query 9547 ATGAAGATCAAAAACCTCACTAACATGTTACTGTTAAACTTGGCAATATCTGACTTGCTA 9606
| || | || ||| | | || | ||| | || | || |||| || |||||| ||||
Sbjct 178949 AGGAGGCTCCAAAGCATGACCAGCATCTACCTCCTCAATCTGGCCATCTCTGACCTGCTC 178890
Query 9607 TTTCTTTTAACTTTGCCATTTTGGATGCACTATAT-TGGAATGTATCATGATTGGACTTT 9665
|| || || || |||| || ||||| |||| | | ||| | || ||| |||
Sbjct 178889 TTCCTCTTCACGCTGCCCTTCTGGATTGACTACAAGTTGAAG--AACAGC--TGGGTTTT 178834
Query 9666 TGGTATTTCCCTGTGTAAACTGCTCA-GGGGTGTGTGTTACATGTCACTGTACAGCCAGG 9724
|||| | || |||| || ||||| ||||| | | |||| || |||||||| ||
Sbjct 178833 CGGTAGTGCCATGTGCAAGCTGCTTTCGGGGTCT-TATTACCTGGGCTTGTACAGCGAGA 178775
Query 9725 TCTTTTGCATCATCCTGCTAACAGTAGACAGGTATCTAGCTGTTGTCTATGCTGTAACTG 9784
|||||| |||||||||||| || | |||||||| || || | ||| ||||||| ||
Sbjct 178774 TCTTTTTCATCATCCTGCTGACCATCGACAGGTACCTGGCCATCGTCCATGCTGTGTTTG 178715
Query 9785 CTTTGAGGTTTAGAACAGTAACCTGTGGCATAGTTACCTGTGTATGTACCTGGTTTCTGG 9844
| | || | | || || |||| |||||| | ||| | | |||||| ||||
Sbjct 178714 CAATACGGGCTCGGACTGTCACCTTTGGCATCATCACCAGCATCGTCACCTGGGCCCTGG 178655
Query 9845 CAGGGTTGTTGTCCCTCCCTGAATTTTTCTTTCATGGACACCAAGATGACAATGGTAGGG 9904
| || || |||||| |||| | ||| || ||| || | | ||
Sbjct 178654 CCCTCCTGGCTGCCGTCCCTGGCTTTTAC-TTCTCCGAGACCCAGTGGGAGTTCACCCGG 178596
Query 9905 TTCAGTGTGATCCT-TACTACC--CAGAGATGTCTACAAATGTTTGGAGGCGCGCCCACG 9961
|| | ||| ||| || || | | || |||| | ||||| ||| ||| |
Sbjct 178595 AACACCTGCAGCCTCCACTTCCCTCACCAAAGCCT-CAAA-GAATGGAGACGCTTCCAGG 178538
Query 9962 TTGCAAAGGTGATTATGTTAAGTCTCATTTTGCCTCTGCTCATTATGGCTGTCTGCTACT 10021
| || ||| || | | || || |||| ||| | | ||| |||||||||
Sbjct 178537 CTCTGAAACTGAACATCCTGGGGCTGGTTCTGCCCCTGTTGGTCATGATCGTCTGCTACA 178478
Query 10022 ATGTAATTATCAGAAGACTGTTGAGGCGCCCCAGCAAGAAGAAGTACAAGGCCATCAGGC 10081
| || |||| | ||| | || || |||| |||||||| |||||| || |
Sbjct 178477 CGGGGATCATCAATATTCTGCTCAGTCGGCCCAATGAGAAGAAGGCTAAGGCCGTCCGCT 178418
Query 10082 TCATCTTTGTCATCATGGTGGCCTATTTTGTTTTTTGGACACCCTACAACATTGTTCTCC 10141
| || |||||||||||| | ||| || | |||||||| || |||||| | | |
Sbjct 178417 TGATTTTTGTCATCATGCTCACCTTCTTCCTCTTTTGGACCCCTTACAACCTGACTATGT 178358
Query 10142 TACTGTCTACCTTTCACGCAACCCTTCTTAACC-TGCAGTGTGCATTGAGCAGTAACTTG 10200
| | ||| | || || | | | | | || ||| ||||||| |||||| | ||
Sbjct 178357 TTGTCTCTGCTTTCCAAG-AGCACCTGTTCACCAACCAGTGTGTGCAGAGCAGGGAGCTG 178299
Query 10201 GACATGGCTCTGCTGATAACAAAAACAGTAGCCTACACACACTGTTGCATCAACCCAGTG 10260
|||||||| | | | | || | | |||||||| ||||| || ||||||| ||
Sbjct 178298 GACATGGCCATTCAGGTGACCGAGGTGATCGCCTACACTCACTGCTGTGTCAACCCCGTC 178239
Query 10261 ATCTACGCGTTCGTGGGGGAGAAGTTTAGAAGACACCTGTACCACTTCTTCCACACCTAC 10320
||||| | || ||||| || ||| | | |||| ||| || ||||||| ||
Sbjct 178238 ATCTATGTCTTTGTGGGCCAGCGGTTCCGGAAGTACCTCCGCCAGTTGTTCCACAGGCAC 178179
Query 10321 GTGGCCATCTACCTCTGCAAGTACATCCCCTTCCTGTCTG 10360
|||||| | |||| ||||| | |||||||| ||||
Sbjct 178178 GTGGCCGTGCACCTGGCCAAGTGGCTGCCCTTCCTCTCTG 178139
>seq82
Length=8104705
Score = 178 bits (196), Expect = 2e-39
Identities = 136/161 (84%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809
|||||||||| ||| || | ||||||||| |||||||| |||||||| ||||||||||||
Sbjct 34502 AGGCCCGTGATGTGTGCAATCATGTAGGTAAGCAGGGAATAGCTGGCGATGTTGAAGGGC 34561
Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCC 145869
|| ||||| |||||||| || || | |||||||||||||||||| |||||||| | ||
Sbjct 34562 ACGCCCAGGCCCATGTCACCTGACCTCTGGTACAGCTGGCAGGACAGCTCCCCATTCACC 34621
Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910
|||||||||||||| ||| ||||| || ||||| |||||
Sbjct 34622 ACGTAGAACTGGCAGAGGGCATGGCATGGAGGCAGTGCCAT 34662
>seq89
Length=7633750
Score = 165 bits (182), Expect = 1e-35
Identities = 131/157 (83%), Gaps = 3/157 (2%)
Strand=Plus/Minus
Query 138082 CAGCGCCTCAGCCTCACCCTGAGGGTTTTGAGCTTTTCCCCCAGGGAGTTCACTTTATCC 138141
||||||| |||| || |||||||| || ||||| ||||||||||||||||| | |||
Sbjct 5836301 CAGCGCCGGAGCCGCAGTCTGAGGGTCTTCAGCTTCTCCCCCAGGGAGTTCACGTGCTCC 5836242
Query 138142 TTTTCCTGGTCGGTGCTGTGGTTCTCGGCCTGGGGCATCACCTCCTCCAGGTAAAACTGG 138201
|| | | | | |||||||||||| |||||||||||||||||| | ||||||||||||
Sbjct 5836241 TTGACAT---CTGGGCTGTGGTTCTCTGCCTGGGGCATCACCTCCACTAGGTAAAACTGG 5836185
Query 138202 ATCATCTCAGACAGGGCCTGGCAGCCCAGGTAACCCT 138238
|||||||| |||| ||| ||||| |||||||||||||
Sbjct 5836184 ATCATCTCCGACAAGGCTTGGCAACCCAGGTAACCCT 5836148
Score = 100 bits (110), Expect = 3e-16
Identities = 75/88 (85%), Gaps = 0/88 (0%)
Strand=Plus/Minus
Query 137929 TTCATCTTTGTGGTCATGTAGGCCTCTATGTAGTTAATGAAGATGTCAAACTCGCTCATG 137988
|| ||||| | ||||||||||| ||||||||||| ||||||||||||||||| ||||||
Sbjct 5838460 TTTATCTTCGCTGTCATGTAGGCTTCTATGTAGTTGATGAAGATGTCAAACTCACTCATG 5838401
Query 137989 GCCTTGTAGACCCCTTTTTCCTGGAGCT 138016
|| ||||||| ||||| || || ||||
Sbjct 5838400 GCTTTGTAGATGCCTTTCTCTTGAAGCT 5838373
>seq394
Length=841001
Score = 116 bits (128), Expect = 4e-21
Identities = 170/236 (72%), Gaps = 6/236 (3%)
Strand=Plus/Plus
Query 145672 AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGA--CGTGCGCGTCCCCCAGGACGT 145729
||||| | ||||| | ||| | ||| || || || | ||||| |||| || | |
Sbjct 665324 AGCTGAATTTTCAGTGCCTCAATGTGATTCAGTTAAATACGTGCATCTCCCAAAGAA--T 665381
Query 145730 GGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTA-GGTCAGCAGGGAG 145788
| || |||||||| |||| ||| || ||| ||| || |||||||| ||| |||||||
Sbjct 665382 GCATAAAGTCCCCTGGCTGCAGGTCCCTGATGTGCGCAACCATGTAAGGTAAGCAGGGCA 665441
Query 145789 TAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGG 145848
|||||| | ||| |||| || | |||| |||||| | || || | ||||||| | |
Sbjct 665442 TAGCTGTCAATGCTGAAAGGTATGCCCAAGCCCATGACTCCTGACCTATGGTACATCCAG 665501
Query 145849 CAGGAGAGCTCCCCGCCCGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAG 145904
||||| ||||||| | || |||||||||||| |||| ||||| || |||||
Sbjct 665502 CAGGACAGCTCCCATTCA-CCTTGTAGAACTGGCAGAGGACATGGCATGGAGGCAG 665556
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589984725891320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |