Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ictidomys_20tridecemlineatus_20[refseq_20GCF_5F000236235.1_202011- 11-29] 12,483 sequences; 2,478,393,770 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq128 295 8e-75 seq82 178 2e-39 seq89 165 1e-35 seq394 116 4e-21 >seq128 Length=5608787 Score = 295 bits (326), Expect = 8e-75 Identities = 590/857 (69%), Gaps = 23/857 (3%) Strand=Plus/Plus Query 9509 TGGGCAATATCTTAGTGGTGATTATTGTCATAAGATACATGAAGATCAAAAACCTCACTA 9568 ||||||| | | |||||| | || ||| | ||| || | |||| | | || | Sbjct 223820 TGGGCAACGTGGTGGTGGTGCTGATCCTCACCAAGTACCGGAGGCTCAAGGTCATGACCA 223879 Query 9569 ACATGTTACTGTTAAACTTGGCAATATCTGACTTGCTATTTCTTTTAACTTTGCCATTTT 9628 |||| | ||| | ||| |||| || ||||||||||| ||||| || ||| | || || | Sbjct 223880 ACATCTATCTGCTCAACCTGGCGATTTCTGACTTGCTCTTTCTCTTCACTCTTCCCTTCT 223939 Query 9629 GGATGCACTATATTGGAATGTATCATGATTGGACTTTTGGTATTTCCCTGTGTAAACTGC 9688 |||| ||||| |||| || | | || ||| ||||||| || | |||| || || | Sbjct 223940 GGATCCACTACGTTGGG-TGGAAC--GAGTGGGTTTTTGGTCCTTTCATGTGCAAGCTCC 223996 Query 9689 TCAGGGGTGTGTGTTACATGTCACTGTACAGCCAGGTCTTTTGCATCATCCTGCTAACAG 9748 || ||| | | |||| || |||||||| || |||||| |||||||||||| || Sbjct 223997 TCTCGGGGTTTTATTACCTGGGCTTGTACAGCGAGATCTTTTTCATCATCCTGCTGACCA 224056 Query 9749 TAGACAGGTATCTAGCTGTTGTCTATGCTGTAACTGC--TTTGAGGTTTAGAACAGTAAC 9806 | |||||||| || || | ||| | || || ||| || ||| | || || || Sbjct 224057 TCGACAGGTACCTGGCCATCGTCCACGCCGTGTTTGCCCTTCGAGCCC--GGACGGTGAC 224114 Query 9807 CTGTGGCATAGTTACCTGTGTATGTACCTGGTTTCTGGCAGGGTTGTTGTCCCTCCCTGA 9866 | || | | | | | | |||||| | ||||||| | || | ||||||| || Sbjct 224115 TTTCGGTGTCAGCAGCAGCATCTTCACCTGGGTCCTGGCAGTGCTGGCGGCCCTCCCCGA 224174 Query 9867 ATTTTTCTTTCATGGACACCAAGATGACAATGGTAGGGTTCAGTGTGA--TCCTTACTAC 9924 |||| ||||||| | |||| | | | | || || | || || |||| |||| Sbjct 224175 ATTTATCTTTCACGAGTCCCAACAGGGCTCCGA-AGAGT-CTGTCTGCAGTCCTCTCTAC 224232 Query 9925 CCAGAG-ATGTCTACAAATGTTTGGAGGCGCGCCCACGTTGCAAAGGTGATTATGTTAAG 9983 |||||| | | | | | | ||| ||| ||| | | | ||| || || | Sbjct 224233 CCAGAGGACGAGGAAGACAGCT-GGAAGCGTTTCCATGCTCTGAGAATGAACATCTTGGG 224291 Query 9984 TCTCATTTTGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGTT 10043 ||| | ||||||||||| ||||| |||||||||| || || |||| || ||| | Sbjct 224292 TCTAGCGCTCCCTCTGCTCATCATGGCCGTCTGCTACTCTGGGATCATCAAAACCCTGCT 224351 Query 10044 GAGGCGCCCCAGCAAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGC 10103 ||| |||||| || || ||||||||||||||| ||||||| ||| |||||||||||| Sbjct 224352 GAGATGCCCCAACAGAAAAAAGTACAAGGCCATCCGGCTCATTTTTATCATCATGGTGGT 224411 Query 10104 CTATTTTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAAC 10163 || ||| ||||| ||||| ||||||||| | |||||||| || ||| | ||||| | Sbjct 224412 CTTTTTCGTTTTCTGGACCCCCTACAACCTGGTTCTCCTTCTCTCTGCTTTTCAAATGAA 224471 Query 10164 CCTTCTTAACCTGCAG-TGTGCATTGAGCAGTA---ACTTGGACATGGCTCTGCTGATAA 10219 | | || | | ||| |||| | |||||| | ||||| |||| ||| | | | Sbjct 224472 CTTACTGGA-GTACAGCTGTG---AGCGCAGTAGACATCTGGACCTGGCCATGCAGGTGA 224527 Query 10220 CAAAAACAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGG 10279 | | | ||||| || ||||| ||| ||||||| || |||||||| |||||||| | Sbjct 224528 CGGAGGTGATCGCCTATACCCACTGCTGCGTCAACCCTGTCATCTACGCCTTCGTGGGCG 224587 Query 10280 AGAAGTT-TAGAAGACACCTGTACCACTTCTTCCACACCTACGTGGCCATCTACCTCTGC 10338 ||| ||| |||| | ||||| |||||||||||||| |||||||||||||||| || Sbjct 224588 AGAGGTTCCAGAA-ATACCTGCGCCACTTCTTCCACAGGCACGTGGCCATCTACCTGGGC 224646 Query 10339 AAGTACATCCCCTTCCT 10355 || |||||||| ||||| Sbjct 224647 AAATACATCCCATTCCT 224663 Score = 295 bits (326), Expect = 8e-75 Identities = 590/857 (69%), Gaps = 23/857 (3%) Strand=Plus/Plus Query 176395 TGGGCAATATCTTAGTGGTGATTATTGTCATAAGATACATGAAGATCAAAAACCTCACTA 176454 ||||||| | | |||||| | || ||| | ||| || | |||| | | || | Sbjct 223820 TGGGCAACGTGGTGGTGGTGCTGATCCTCACCAAGTACCGGAGGCTCAAGGTCATGACCA 223879 Query 176455 ACATGTTACTGTTAAACTTGGCAATATCTGACTTGCTATTTCTTTTAACTTTGCCATTTT 176514 |||| | ||| | ||| |||| || ||||||||||| ||||| || ||| | || || | Sbjct 223880 ACATCTATCTGCTCAACCTGGCGATTTCTGACTTGCTCTTTCTCTTCACTCTTCCCTTCT 223939 Query 176515 GGATGCACTATATTGGAATGTATCATGATTGGACTTTTGGTATTTCCCTGTGTAAACTGC 176574 |||| ||||| |||| || | | || ||| ||||||| || | |||| || || | Sbjct 223940 GGATCCACTACGTTGGG-TGGAAC--GAGTGGGTTTTTGGTCCTTTCATGTGCAAGCTCC 223996 Query 176575 TCAGGGGTGTGTGTTACATGTCACTGTACAGCCAGGTCTTTTGCATCATCCTGCTAACAG 176634 || ||| | | |||| || |||||||| || |||||| |||||||||||| || Sbjct 223997 TCTCGGGGTTTTATTACCTGGGCTTGTACAGCGAGATCTTTTTCATCATCCTGCTGACCA 224056 Query 176635 TAGACAGGTATCTAGCTGTTGTCTATGCTGTAACTGC--TTTGAGGTTTAGAACAGTAAC 176692 | |||||||| || || | ||| | || || ||| || ||| | || || || Sbjct 224057 TCGACAGGTACCTGGCCATCGTCCACGCCGTGTTTGCCCTTCGAGCCC--GGACGGTGAC 224114 Query 176693 CTGTGGCATAGTTACCTGTGTATGTACCTGGTTTCTGGCAGGGTTGTTGTCCCTCCCTGA 176752 | || | | | | | | |||||| | ||||||| | || | ||||||| || Sbjct 224115 TTTCGGTGTCAGCAGCAGCATCTTCACCTGGGTCCTGGCAGTGCTGGCGGCCCTCCCCGA 224174 Query 176753 ATTTTTCTTTCATGGACACCAAGATGACAATGGTAGGGTTCAGTGTGA--TCCTTACTAC 176810 |||| ||||||| | |||| | | | | || || | || || |||| |||| Sbjct 224175 ATTTATCTTTCACGAGTCCCAACAGGGCTCCGA-AGAGT-CTGTCTGCAGTCCTCTCTAC 224232 Query 176811 CCAGAG-ATGTCTACAAATGTTTGGAGGCGCGCCCACGTTGCAAAGGTGATTATGTTAAG 176869 |||||| | | | | | | ||| ||| ||| | | | ||| || || | Sbjct 224233 CCAGAGGACGAGGAAGACAGCT-GGAAGCGTTTCCATGCTCTGAGAATGAACATCTTGGG 224291 Query 176870 TCTCATTTTGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGTT 176929 ||| | ||||||||||| ||||| |||||||||| || || |||| || ||| | Sbjct 224292 TCTAGCGCTCCCTCTGCTCATCATGGCCGTCTGCTACTCTGGGATCATCAAAACCCTGCT 224351 Query 176930 GAGGCGCCCCAGCAAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGC 176989 ||| |||||| || || ||||||||||||||| ||||||| ||| |||||||||||| Sbjct 224352 GAGATGCCCCAACAGAAAAAAGTACAAGGCCATCCGGCTCATTTTTATCATCATGGTGGT 224411 Query 176990 CTATTTTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAAC 177049 || ||| ||||| ||||| ||||||||| | |||||||| || ||| | ||||| | Sbjct 224412 CTTTTTCGTTTTCTGGACCCCCTACAACCTGGTTCTCCTTCTCTCTGCTTTTCAAATGAA 224471 Query 177050 CCTTCTTAACCTGCAG-TGTGCATTGAGCAGTA---ACTTGGACATGGCTCTGCTGATAA 177105 | | || | | ||| |||| | |||||| | ||||| |||| ||| | | | Sbjct 224472 CTTACTGGA-GTACAGCTGTG---AGCGCAGTAGACATCTGGACCTGGCCATGCAGGTGA 224527 Query 177106 CAAAAACAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGG 177165 | | | ||||| || ||||| ||| ||||||| || |||||||| |||||||| | Sbjct 224528 CGGAGGTGATCGCCTATACCCACTGCTGCGTCAACCCTGTCATCTACGCCTTCGTGGGCG 224587 Query 177166 AGAAGTT-TAGAAGACACCTGTACCACTTCTTCCACACCTACGTGGCCATCTACCTCTGC 177224 ||| ||| |||| | ||||| |||||||||||||| |||||||||||||||| || Sbjct 224588 AGAGGTTCCAGAA-ATACCTGCGCCACTTCTTCCACAGGCACGTGGCCATCTACCTGGGC 224646 Query 177225 AAGTACATCCCCTTCCT 177241 || |||||||| ||||| Sbjct 224647 AAATACATCCCATTCCT 224663 Score = 114 bits (126), Expect = 2e-20 Identities = 213/307 (69%), Gaps = 12/307 (4%) Strand=Plus/Plus Query 9992 TGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCC 10051 |||| |||||| | |||| ||||||||| | || | |||| ||| | || | | Sbjct 296424 TGCCCCTGCTCGTCATGGTCATCTGCTACTCGGGGATCCTGAGAACCCTGCTTCGGTGTC 296483 Query 10052 CCAGCAAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATTTTG 10111 ||| |||||| ||||||| | ||||||||||| ||||||| | | ||| ||| Sbjct 296484 GGAGCGAGAAGAGACACAAGGCTGTGAGGCTCATCTTCACCATCATGATCGTCTACTTTC 296543 Query 10112 TTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCTTCTTA 10171 |||| ||| | ||||||||||| || ||||| ||| | ||||| || | || || || Sbjct 296544 TTTTCTGGGCTCCCTACAACATCGTCCTCCTCCTGACCACCTTCCA-GGAATTCT--TTG 296600 Query 10172 ACCTG---CAGTGTGCATTGAGCAGTAAC---TTGGACATGGCTCTGCTGATAACAAAAA 10225 |||| | |||| || || |||| ||||| || ||| | | || | | Sbjct 296601 GCCTGAATAACTGTG-AT--AGTTCTAACAGACTGGACCAAGCCATGCAGGTGACCGAGA 296657 Query 10226 CAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAAGT 10285 | | | || ||||||||||||||||| || |||||||| ||||| |||||||||| Sbjct 296658 CTCTCGGGATGACGCACTGTTGCATCAACCCTGTCATCTACGCCTTCGTCGGGGAGAAGT 296717 Query 10286 TTAGAAG 10292 | ||||| Sbjct 296718 TCAGAAG 296724 Score = 114 bits (126), Expect = 2e-20 Identities = 213/307 (69%), Gaps = 12/307 (4%) Strand=Plus/Plus Query 176878 TGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCC 176937 |||| |||||| | |||| ||||||||| | || | |||| ||| | || | | Sbjct 296424 TGCCCCTGCTCGTCATGGTCATCTGCTACTCGGGGATCCTGAGAACCCTGCTTCGGTGTC 296483 Query 176938 CCAGCAAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATTTTG 176997 ||| |||||| ||||||| | ||||||||||| ||||||| | | ||| ||| Sbjct 296484 GGAGCGAGAAGAGACACAAGGCTGTGAGGCTCATCTTCACCATCATGATCGTCTACTTTC 296543 Query 176998 TTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCTTCTTA 177057 |||| ||| | ||||||||||| || ||||| ||| | ||||| || | || || || Sbjct 296544 TTTTCTGGGCTCCCTACAACATCGTCCTCCTCCTGACCACCTTCCA-GGAATTCT--TTG 296600 Query 177058 ACCTG---CAGTGTGCATTGAGCAGTAAC---TTGGACATGGCTCTGCTGATAACAAAAA 177111 |||| | |||| || || |||| ||||| || ||| | | || | | Sbjct 296601 GCCTGAATAACTGTG-AT--AGTTCTAACAGACTGGACCAAGCCATGCAGGTGACCGAGA 296657 Query 177112 CAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAAGT 177171 | | | || ||||||||||||||||| || |||||||| ||||| |||||||||| Sbjct 296658 CTCTCGGGATGACGCACTGTTGCATCAACCCTGTCATCTACGCCTTCGTCGGGGAGAAGT 296717 Query 177172 TTAGAAG 177178 | ||||| Sbjct 296718 TCAGAAG 296724 Score = 95.1 bits (104), Expect = 1e-14 Identities = 558/880 (63%), Gaps = 15/880 (2%) Strand=Plus/Minus Query 176373 CTTGTGTTTCTCTTTGGGTTGTTGGGCAATATCTTAGTGGTGATTATTGTCATAAGATAC 176432 || || ||| || | || ||| | ||||| ||| | ||||| || | |||| || Sbjct 179009 CTGGTCTTTGTCATCGGCTTGATTGGCAACATCCTGGTGGTCCTTGTCCTCATGCAGCAC 178950 Query 176433 ATGAAGATCAAAAACCTCACTAACATGTTACTGTTAAACTTGGCAATATCTGACTTGCTA 176492 | || | || ||| | | || | ||| | || | || |||| || |||||| |||| Sbjct 178949 AGGAGGCTCCAAAGCATGACCAGCATCTACCTCCTCAATCTGGCCATCTCTGACCTGCTC 178890 Query 176493 TTTCTTTTAACTTTGCCATTTTGGATGCACTATAT-TGGAATGTATCATGATTGGACTTT 176551 || || || || |||| || ||||| |||| | | ||| | || ||| ||| Sbjct 178889 TTCCTCTTCACGCTGCCCTTCTGGATTGACTACAAGTTGAAG--AACAGC--TGGGTTTT 178834 Query 176552 TGGTATTTCCCTGTGTAAACTGCTCA-GGGGTGTGTGTTACATGTCACTGTACAGCCAGG 176610 |||| | || |||| || ||||| ||||| | | |||| || |||||||| || Sbjct 178833 CGGTAGTGCCATGTGCAAGCTGCTTTCGGGGTCT-TATTACCTGGGCTTGTACAGCGAGA 178775 Query 176611 TCTTTTGCATCATCCTGCTAACAGTAGACAGGTATCTAGCTGTTGTCTATGCTGTAACTG 176670 |||||| |||||||||||| || | |||||||| || || | ||| ||||||| || Sbjct 178774 TCTTTTTCATCATCCTGCTGACCATCGACAGGTACCTGGCCATCGTCCATGCTGTGTTTG 178715 Query 176671 CTTTGAGGTTTAGAACAGTAACCTGTGGCATAGTTACCTGTGTATGTACCTGGTTTCTGG 176730 | | || | | || || |||| |||||| | ||| | | |||||| |||| Sbjct 178714 CAATACGGGCTCGGACTGTCACCTTTGGCATCATCACCAGCATCGTCACCTGGGCCCTGG 178655 Query 176731 CAGGGTTGTTGTCCCTCCCTGAATTTTTCTTTCATGGACACCAAGATGACAATGGTAGGG 176790 | || || |||||| |||| | ||| || ||| || | | || Sbjct 178654 CCCTCCTGGCTGCCGTCCCTGGCTTTTAC-TTCTCCGAGACCCAGTGGGAGTTCACCCGG 178596 Query 176791 TTCAGTGTGATCCT-TACTACC--CAGAGATGTCTACAAATGTTTGGAGGCGCGCCCACG 176847 || | ||| ||| || || | | || |||| | ||||| ||| ||| | Sbjct 178595 AACACCTGCAGCCTCCACTTCCCTCACCAAAGCCT-CAAA-GAATGGAGACGCTTCCAGG 178538 Query 176848 TTGCAAAGGTGATTATGTTAAGTCTCATTTTGCCTCTGCTCATTATGGCTGTCTGCTACT 176907 | || ||| || | | || || |||| ||| | | ||| ||||||||| Sbjct 178537 CTCTGAAACTGAACATCCTGGGGCTGGTTCTGCCCCTGTTGGTCATGATCGTCTGCTACA 178478 Query 176908 ATGTAATTATCAGAAGACTGTTGAGGCGCCCCAGCAAGAAGAAGTACAAGGCCATCAGGC 176967 | || |||| | ||| | || || |||| |||||||| |||||| || | Sbjct 178477 CGGGGATCATCAATATTCTGCTCAGTCGGCCCAATGAGAAGAAGGCTAAGGCCGTCCGCT 178418 Query 176968 TCATCTTTGTCATCATGGTGGCCTATTTTGTTTTTTGGACACCCTACAACATTGTTCTCC 177027 | || |||||||||||| | ||| || | |||||||| || |||||| | | | Sbjct 178417 TGATTTTTGTCATCATGCTCACCTTCTTCCTCTTTTGGACCCCTTACAACCTGACTATGT 178358 Query 177028 TACTGTCTACCTTTCACGCAACCCTTCTTAACC-TGCAGTGTGCATTGAGCAGTAACTTG 177086 | | ||| | || || | | | | | || ||| ||||||| |||||| | || Sbjct 178357 TTGTCTCTGCTTTCCAAG-AGCACCTGTTCACCAACCAGTGTGTGCAGAGCAGGGAGCTG 178299 Query 177087 GACATGGCTCTGCTGATAACAAAAACAGTAGCCTACACACACTGTTGCATCAACCCAGTG 177146 |||||||| | | | | || | | |||||||| ||||| || ||||||| || Sbjct 178298 GACATGGCCATTCAGGTGACCGAGGTGATCGCCTACACTCACTGCTGTGTCAACCCCGTC 178239 Query 177147 ATCTACGCGTTCGTGGGGGAGAAGTTTAGAAGACACCTGTACCACTTCTTCCACACCTAC 177206 ||||| | || ||||| || ||| | | |||| ||| || ||||||| || Sbjct 178238 ATCTATGTCTTTGTGGGCCAGCGGTTCCGGAAGTACCTCCGCCAGTTGTTCCACAGGCAC 178179 Query 177207 GTGGCCATCTACCTCTGCAAGTACATCCCCTTCCTGTCTG 177246 |||||| | |||| ||||| | |||||||| |||| Sbjct 178178 GTGGCCGTGCACCTGGCCAAGTGGCTGCCCTTCCTCTCTG 178139 Score = 95.1 bits (104), Expect = 1e-14 Identities = 558/880 (63%), Gaps = 15/880 (2%) Strand=Plus/Minus Query 9487 CTTGTGTTTCTCTTTGGGTTGTTGGGCAATATCTTAGTGGTGATTATTGTCATAAGATAC 9546 || || ||| || | || ||| | ||||| ||| | ||||| || | |||| || Sbjct 179009 CTGGTCTTTGTCATCGGCTTGATTGGCAACATCCTGGTGGTCCTTGTCCTCATGCAGCAC 178950 Query 9547 ATGAAGATCAAAAACCTCACTAACATGTTACTGTTAAACTTGGCAATATCTGACTTGCTA 9606 | || | || ||| | | || | ||| | || | || |||| || |||||| |||| Sbjct 178949 AGGAGGCTCCAAAGCATGACCAGCATCTACCTCCTCAATCTGGCCATCTCTGACCTGCTC 178890 Query 9607 TTTCTTTTAACTTTGCCATTTTGGATGCACTATAT-TGGAATGTATCATGATTGGACTTT 9665 || || || || |||| || ||||| |||| | | ||| | || ||| ||| Sbjct 178889 TTCCTCTTCACGCTGCCCTTCTGGATTGACTACAAGTTGAAG--AACAGC--TGGGTTTT 178834 Query 9666 TGGTATTTCCCTGTGTAAACTGCTCA-GGGGTGTGTGTTACATGTCACTGTACAGCCAGG 9724 |||| | || |||| || ||||| ||||| | | |||| || |||||||| || Sbjct 178833 CGGTAGTGCCATGTGCAAGCTGCTTTCGGGGTCT-TATTACCTGGGCTTGTACAGCGAGA 178775 Query 9725 TCTTTTGCATCATCCTGCTAACAGTAGACAGGTATCTAGCTGTTGTCTATGCTGTAACTG 9784 |||||| |||||||||||| || | |||||||| || || | ||| ||||||| || Sbjct 178774 TCTTTTTCATCATCCTGCTGACCATCGACAGGTACCTGGCCATCGTCCATGCTGTGTTTG 178715 Query 9785 CTTTGAGGTTTAGAACAGTAACCTGTGGCATAGTTACCTGTGTATGTACCTGGTTTCTGG 9844 | | || | | || || |||| |||||| | ||| | | |||||| |||| Sbjct 178714 CAATACGGGCTCGGACTGTCACCTTTGGCATCATCACCAGCATCGTCACCTGGGCCCTGG 178655 Query 9845 CAGGGTTGTTGTCCCTCCCTGAATTTTTCTTTCATGGACACCAAGATGACAATGGTAGGG 9904 | || || |||||| |||| | ||| || ||| || | | || Sbjct 178654 CCCTCCTGGCTGCCGTCCCTGGCTTTTAC-TTCTCCGAGACCCAGTGGGAGTTCACCCGG 178596 Query 9905 TTCAGTGTGATCCT-TACTACC--CAGAGATGTCTACAAATGTTTGGAGGCGCGCCCACG 9961 || | ||| ||| || || | | || |||| | ||||| ||| ||| | Sbjct 178595 AACACCTGCAGCCTCCACTTCCCTCACCAAAGCCT-CAAA-GAATGGAGACGCTTCCAGG 178538 Query 9962 TTGCAAAGGTGATTATGTTAAGTCTCATTTTGCCTCTGCTCATTATGGCTGTCTGCTACT 10021 | || ||| || | | || || |||| ||| | | ||| ||||||||| Sbjct 178537 CTCTGAAACTGAACATCCTGGGGCTGGTTCTGCCCCTGTTGGTCATGATCGTCTGCTACA 178478 Query 10022 ATGTAATTATCAGAAGACTGTTGAGGCGCCCCAGCAAGAAGAAGTACAAGGCCATCAGGC 10081 | || |||| | ||| | || || |||| |||||||| |||||| || | Sbjct 178477 CGGGGATCATCAATATTCTGCTCAGTCGGCCCAATGAGAAGAAGGCTAAGGCCGTCCGCT 178418 Query 10082 TCATCTTTGTCATCATGGTGGCCTATTTTGTTTTTTGGACACCCTACAACATTGTTCTCC 10141 | || |||||||||||| | ||| || | |||||||| || |||||| | | | Sbjct 178417 TGATTTTTGTCATCATGCTCACCTTCTTCCTCTTTTGGACCCCTTACAACCTGACTATGT 178358 Query 10142 TACTGTCTACCTTTCACGCAACCCTTCTTAACC-TGCAGTGTGCATTGAGCAGTAACTTG 10200 | | ||| | || || | | | | | || ||| ||||||| |||||| | || Sbjct 178357 TTGTCTCTGCTTTCCAAG-AGCACCTGTTCACCAACCAGTGTGTGCAGAGCAGGGAGCTG 178299 Query 10201 GACATGGCTCTGCTGATAACAAAAACAGTAGCCTACACACACTGTTGCATCAACCCAGTG 10260 |||||||| | | | | || | | |||||||| ||||| || ||||||| || Sbjct 178298 GACATGGCCATTCAGGTGACCGAGGTGATCGCCTACACTCACTGCTGTGTCAACCCCGTC 178239 Query 10261 ATCTACGCGTTCGTGGGGGAGAAGTTTAGAAGACACCTGTACCACTTCTTCCACACCTAC 10320 ||||| | || ||||| || ||| | | |||| ||| || ||||||| || Sbjct 178238 ATCTATGTCTTTGTGGGCCAGCGGTTCCGGAAGTACCTCCGCCAGTTGTTCCACAGGCAC 178179 Query 10321 GTGGCCATCTACCTCTGCAAGTACATCCCCTTCCTGTCTG 10360 |||||| | |||| ||||| | |||||||| |||| Sbjct 178178 GTGGCCGTGCACCTGGCCAAGTGGCTGCCCTTCCTCTCTG 178139 >seq82 Length=8104705 Score = 178 bits (196), Expect = 2e-39 Identities = 136/161 (84%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809 |||||||||| ||| || | ||||||||| |||||||| |||||||| |||||||||||| Sbjct 34502 AGGCCCGTGATGTGTGCAATCATGTAGGTAAGCAGGGAATAGCTGGCGATGTTGAAGGGC 34561 Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCC 145869 || ||||| |||||||| || || | |||||||||||||||||| |||||||| | || Sbjct 34562 ACGCCCAGGCCCATGTCACCTGACCTCTGGTACAGCTGGCAGGACAGCTCCCCATTCACC 34621 Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910 |||||||||||||| ||| ||||| || ||||| ||||| Sbjct 34622 ACGTAGAACTGGCAGAGGGCATGGCATGGAGGCAGTGCCAT 34662 >seq89 Length=7633750 Score = 165 bits (182), Expect = 1e-35 Identities = 131/157 (83%), Gaps = 3/157 (2%) Strand=Plus/Minus Query 138082 CAGCGCCTCAGCCTCACCCTGAGGGTTTTGAGCTTTTCCCCCAGGGAGTTCACTTTATCC 138141 ||||||| |||| || |||||||| || ||||| ||||||||||||||||| | ||| Sbjct 5836301 CAGCGCCGGAGCCGCAGTCTGAGGGTCTTCAGCTTCTCCCCCAGGGAGTTCACGTGCTCC 5836242 Query 138142 TTTTCCTGGTCGGTGCTGTGGTTCTCGGCCTGGGGCATCACCTCCTCCAGGTAAAACTGG 138201 || | | | | |||||||||||| |||||||||||||||||| | |||||||||||| Sbjct 5836241 TTGACAT---CTGGGCTGTGGTTCTCTGCCTGGGGCATCACCTCCACTAGGTAAAACTGG 5836185 Query 138202 ATCATCTCAGACAGGGCCTGGCAGCCCAGGTAACCCT 138238 |||||||| |||| ||| ||||| ||||||||||||| Sbjct 5836184 ATCATCTCCGACAAGGCTTGGCAACCCAGGTAACCCT 5836148 Score = 100 bits (110), Expect = 3e-16 Identities = 75/88 (85%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 137929 TTCATCTTTGTGGTCATGTAGGCCTCTATGTAGTTAATGAAGATGTCAAACTCGCTCATG 137988 || ||||| | ||||||||||| ||||||||||| ||||||||||||||||| |||||| Sbjct 5838460 TTTATCTTCGCTGTCATGTAGGCTTCTATGTAGTTGATGAAGATGTCAAACTCACTCATG 5838401 Query 137989 GCCTTGTAGACCCCTTTTTCCTGGAGCT 138016 || ||||||| ||||| || || |||| Sbjct 5838400 GCTTTGTAGATGCCTTTCTCTTGAAGCT 5838373 >seq394 Length=841001 Score = 116 bits (128), Expect = 4e-21 Identities = 170/236 (72%), Gaps = 6/236 (3%) Strand=Plus/Plus Query 145672 AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGA--CGTGCGCGTCCCCCAGGACGT 145729 ||||| | ||||| | ||| | ||| || || || | ||||| |||| || | | Sbjct 665324 AGCTGAATTTTCAGTGCCTCAATGTGATTCAGTTAAATACGTGCATCTCCCAAAGAA--T 665381 Query 145730 GGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTA-GGTCAGCAGGGAG 145788 | || |||||||| |||| ||| || ||| ||| || |||||||| ||| ||||||| Sbjct 665382 GCATAAAGTCCCCTGGCTGCAGGTCCCTGATGTGCGCAACCATGTAAGGTAAGCAGGGCA 665441 Query 145789 TAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGG 145848 |||||| | ||| |||| || | |||| |||||| | || || | ||||||| | | Sbjct 665442 TAGCTGTCAATGCTGAAAGGTATGCCCAAGCCCATGACTCCTGACCTATGGTACATCCAG 665501 Query 145849 CAGGAGAGCTCCCCGCCCGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAG 145904 ||||| ||||||| | || |||||||||||| |||| ||||| || ||||| Sbjct 665502 CAGGACAGCTCCCATTCA-CCTTGTAGAACTGGCAGAGGACATGGCATGGAGGCAG 665556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589984725891320