Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ictidomys_20tridecemlineatus_20[refseq_20GCF_5F000236235.1_202011-
11-29] 12,483 sequences; 2,478,393,770 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq536 288 1e-72
seq59 179 5e-40
seq77 178 2e-39
seq131 170 3e-37
seq260 165 1e-35
seq58 152 7e-32
seq30 122 1e-22
seq64 111 2e-19
seq3 105 9e-18
seq2 102 1e-16
seq299 95.1 2e-14
>seq536
Length=337149
Score = 288 bits (318), Expect = 1e-72
Identities = 632/944 (67%), Gaps = 40/944 (4%)
Strand=Plus/Plus
Query 35805 TGTTTCTTTAAAAATCAACATCTAGAGAAAAATGATTGTCTTCTTGA---GACATAACTC 35861
|||| ||||||| ||| |||| | | |||| ||| ||| | || ||||| ||||
Sbjct 201724 TGTTCATTTAAAAGTCAGCATCCAAGGTAAAAGAATTATCTGTTGGATTCGACATCACTC 201783
Query 35862 CCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATA 35921
||||||| || || || || || | || || || || |||||||| ||||||| ||| |
Sbjct 201784 CCATTTTCTGATACTCGCCTACTCCCTTCTCAAAGAAGTTAGTTTTCCCTTCTAGTGAAA 201843
Query 35922 TATTTTCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCCCAA-TTCA 35980
|||| ||||| || | |||||||| || || |||| || ||||| |||| ||||
Sbjct 201844 TATTCTCCATAAAGTTAAATGGATTTTCTACTTTGAAAATCTTGTTAAAGCCCAGCTTCA 201903
Query 35981 GAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCT 36040
| | | | |||||||| |||||||| || || ||||||| |||||||| ||
Sbjct 201904 GCA-TAAGCCTATCTGCCACAAATTCAATGTACTGCTTCATCAAAGTGCAATTCATCCCA 201962
Query 36041 ATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTT 36100
|| || || | || | || | || || || || || || || || || | |
Sbjct 201963 ATTAGCTTCTCAGGCAAGGCTTCTGTGAGGAACTCCTGATCTATCTTGAAGGCAT---TG 202019
Query 36101 ATAATAGATA---TTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAA 36157
||||| | | ||||| | | || ||| | | | ||||| | |||||
Sbjct 202020 ATAATTGTTTCTTTTACTCTCTGCTCTGATGGTTTGTGAAGCAGGTGTTTGAGCATCAGG 202079
Query 36158 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 36217
|| || || || ||||||| |||||| ||||| ||||| | ||| |||||||| |||||
Sbjct 202080 CAGGCAAAGTCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGG 202139
Query 36218 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 36277
|| ||||| || || || || || ||||| ||||||||
Sbjct 202140 CCAGGCATCAGTCCTCGTTTCTTGAGCCA----------------------GAAAAGAAG 202177
Query 36278 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTCATGT 36334
|||| || | || |||||||| | || | |||||||| | | | ||||
Sbjct 202178 ATTCTGTCCATAGCAGCAAAGGCTACAACACGTTCTCCATAGGTAGCCTCTTTGTCCCCA 202237
Query 36335 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 36394
||| | | ||||| ||| ||||| || |||||||||||||| || | |||||
Sbjct 202238 ATCAAATGCAAGGCCCAT--GGCTTTCTTCTTCACACAAGGCATTGTTTCAGTGGCATTG 202295
Query 36395 AAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATT 36454
|||||| | | |||| || ||||||| ||| || ||||| | |||||||||||||
Sbjct 202296 AAGAGAAATTCCCTTTCTTTGAAGTCTTTAATATAAGTGTCAATAAGAAGACTATACATT 202355
Query 36455 TCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 36514
|| ||||| |||||||| ||||| ||||| || || ||||||| | || || |||||
Sbjct 202356 TCAGAATGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACTGCGGGCTTCTGTAATT 202415
Query 36515 TGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 36574
|| |||||| | |||| | || | ||||| || || ||||| | |||| || |||
Sbjct 202416 TGAACTTCTTGGCTAAATGGCTCCACCAAATTCTCCTTTACTATGCTATCACCTGCCGCA 202475
Query 36575 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGTTTATTCCAATCA 36634
| || |||| | || ||||||||||| ||| | || | || | ||| |
Sbjct 202476 GAGAAAGCCAGAATGTG-GATATAAAATATTGTTCCTCAGGCTTCAGGGCTTCCCAGTGC 202534
Query 36635 TTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTA 36694
| || || | || | | |||| || || |||||||||| || ||||| || || |||
Sbjct 202535 TGAATGTCCCTGGA-AGAGCCACCTCCTCAGCTGTCCAAAAGGAAGCCTCAGCTTTCTTA 202593
Query 36695 TACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 36738
|||| | || ||| |||| | || || ||||| || || ||
Sbjct 202594 CACATCTGCCGGATACCATGGTGTTCCATAGGAAAGATGACCAA 202637
>seq59
Length=10161055
Score = 179 bits (198), Expect = 5e-40
Identities = 568/875 (65%), Gaps = 19/875 (2%)
Strand=Plus/Minus
Query 35853 ACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTT 35912
|||| |||||||| | || || || || || | || || |||||||| || ||||
Sbjct 9903270 ACATCACTCCCATCCTCTGATACTCGCCTAC-----TATCAAAGAAATTAGTCTTCCCTT 9903216
Query 35913 CTAATGATATATTTTCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATC 35972
|| |||| ||| |||| || | |||||||| || | ||| || |||||
Sbjct 9903215 CTGATGAACCATTCCCCATAAAGACAAATGGATTTTCCACTCTGAAAACCTTCTTAAAGT 9903156
Query 35973 CCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAAT 36032
|||| || || | || ||||| || ||||| || | |||||| ||| |
Sbjct 9903155 CCAACTCTAGCATGAGCCTGTCTGCCACGAATTCAATGAACTGCTTCATCCAAGTACAGT 9903096
Query 36033 TCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCG 36092
|| | || || || || | || | ||| |||| || | || ||||| || ||| |
Sbjct 9903095 TCCTCCCAATGAGCTTCATGGGCAAGGCCTCAGTGAGGAGCTCCTGTTCCATCCTGACAG 9903036
Query 36093 CGTCTGTTATAATAGATATTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACA 36152
| | || || || ||||| | | || |||| | | | | || |||
Sbjct 9903035 CATTGACGATTATTTATTTTACTCTCTGCTCTGATGGTGTGTGTAGCAGGTATTCGGACA 9902976
Query 36153 TCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACG 36212
|| || || || || |||||| |||||||||||| || || | ||| |||||||| |
Sbjct 9902975 TCGGGCA-GCAAATTCAGAGTGTAAACCCTCGTCTCTGCTGATAAGTTCATTGGAAAATG 9902917
Query 36213 TGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAA 36272
|||| || ||||| || | || | ||||||||||| || |||||||| |||||||
Sbjct 9902916 TGAGGCCAGGCATCAGTTC-----TTATGAGCCAAAATATTGATGCAAATGAGCCAGAAA 9902862
Query 36273 AGAAAATTCCTTC--TACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACT 36327
|||| ||| || | || || || ||| | | || | | || || | | | |
Sbjct 9902861 AGAAGATTTCTCCCGTAGTG--GCCAAGACTACAACACGTTTTCTGTAGGTAGCTTCTTT 9902804
Query 36328 GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTAT 36387
||| |||| || || || || ||||| || || |||||||| | || ||
Sbjct 9902803 GTCCCCAGTCCAACACAAGGCACAGTCTGCTTTCTTCTTCACCCAAGGCATCATTTCAAT 9902744
Query 36388 AGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACT 36447
||| | ||||| | | | || | || ||||| || | ||||| | ||||
Sbjct 9902743 GGCACTGGAGAGAAATTCCCTGTCTTAGGAATTTTTAATGTAAATGTCAATAAGGAGACC 9902684
Query 36448 ATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTC 36507
||| ||||| ||||| |||||||| || || | ||| || || ||||||| | || ||
Sbjct 9902683 ATATATTTCAGAATGTATGTTTTCCATAGCAACTTGGAAGCCACAGAAACAGCCGGCTTC 9902624
Query 36508 GGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACT 36567
|||| || || ||| | |||||| | | | ||||||| | |||| || ||||
Sbjct 9902623 TATAATTTGAACCTCTTGGCTAAATCGCTGCACCAGATTTTCACTTGCTATGCCATCACG 9902564
Query 36568 GGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGTTTATT 36627
||| |||| || || | |||||| |||||||||| ||| | || | || |
Sbjct 9902563 TGCTTCAAAGAAAGCTAGAACATGTGATATAAAATATCATTCCTCAGGCTTCAGGGCCTG 9902504
Query 36628 CCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGC 36687
|| | | | || || || | |||||| || ||| ||||||| || || ||||| ||
Sbjct 9902503 CCGGTGCTGACTGTCCTTGGAAAGATCCACCTCCTCCGCTGTCCAGAAGGACGCCTCGGC 9902444
Query 36688 CTTTTTATACATATTCCAGATGTCATGAT-ATTGA 36721
|| |||||||| | ||| || ||||| | |||||
Sbjct 9902443 TTTCTTATACATTTGCCAAATATCATGGTGATTGA 9902409
>seq77
Length=8378111
Score = 178 bits (196), Expect = 2e-39
Identities = 164/208 (79%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 9227 TTATTTCTTATTAGATACTTCCAAAAGCTGTAACAGATGCAAGAACAGATTGATGATATC 9286
||| || |||||| | ||||||||| | |||| || |||| ||| ||||| || |||||
Sbjct 4208016 TTACTTTTTATTAACTGCTTCCAAAAACCGTAATAGGTGCAGGAATAGATTAATAATATC 4208075
Query 9287 CAAGTAGAAATTGATAGAGGCTAACACATAGTCTTCAGGCGAGAGCTTATGTATTAGTGA 9346
|| ||||| |||| | ||||| ||||| |||||||| || |||||||| || ||||
Sbjct 4208076 CATGTAGAGGCTGATGGCAGCTAATACATACTCTTCAGGTGACAGCTTATGCATCAGTGT 4208135
Query 9347 GTGCGTGTCATAGATAATGAATCCGCAGAATACAAGGGCCCCAAAAGCAGACAGGACCAG 9406
||| ||||||||||| |||||||| ||||| | |||||| || | ||||| || |||||
Sbjct 4208136 GTGTGTGTCATAGATGATGAATCCACAGAAAAGAAGGGCTCCTACAGCAGCCAAGACCAA 4208195
Query 9407 CTCCACTGTTTCACTTTGCACAAATATC 9434
||||||||| ||||| | | ||| |||
Sbjct 4208196 CTCCACTGTCTCACTATAAAAAAAAATC 4208223
Score = 111 bits (122), Expect = 2e-19
Identities = 96/119 (81%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 9480 CCTGCTCCAAGTTTACTGAAATCTCTCTTTGATTGTAGAGTATATGCAGTCAGAGCAAGA 9539
|||||||||| ||| |||||||||||||| |||||||||||||| || | | | |||
Sbjct 4213492 CCTGCTCCAAATTTGCTGAAATCTCTCTTAGATTGTAGAGTATAAATGGTTAAACCGAGA 4213551
Query 9540 AACACTGCAGTAGTCAGCATGAAAGCTTGCATAACGACATGCACATCATAGAAAGTAAC 9598
|| |||| ||||||||| | |||||||||| || | || ||||| |||||||||||
Sbjct 4213552 AATACTGTAGTAGTCAGTACAAAAGCTTGCAGAATTATATATACATCGTAGAAAGTAAC 4213610
Score = 95.1 bits (104), Expect = 2e-14
Identities = 69/80 (86%), Gaps = 0/80 (0%)
Strand=Plus/Plus
Query 9847 CCATTCGTATGTGCACACTGGCAGACGCCACCGAGCTGCCATAGTTGAAGTCGTCCTCGA 9906
||||||| |||||||| ||||| || ||||| ||||||||||||||||||| |||||||
Sbjct 4224870 CCATTCGGATGTGCACGCTGGCGGAGGCCACGCAGCTGCCATAGTTGAAGTCATCCTCGA 4224929
Query 9907 TGGAGGAGCACGCGTAGAGG 9926
| |||||||| | |||| ||
Sbjct 4224930 TTGAGGAGCAAGGGTAGCGG 4224949
Score = 86.0 bits (94), Expect = 8e-12
Identities = 67/80 (84%), Gaps = 0/80 (0%)
Strand=Plus/Plus
Query 9632 AAATCCACAAAGCAGGTATAAATTCAGGGGATGTTTATGTCTGTGTAAAGTCAATGCGAA 9691
||||||| |||||||||| | || || |||||||||||||||| ||| |||||||| ||
Sbjct 4218471 AAATCCAAAAAGCAGGTACAGGTTAAGAGGATGTTTATGTCTGTTTAAGGTCAATGCAAA 4218530
Query 9692 AATCAAGCCTATAGATACGA 9711
|||||| || | |||| |||
Sbjct 4218531 AATCAAACCCAGAGATCCGA 4218550
>seq131
Length=5549739
Score = 170 bits (188), Expect = 3e-37
Identities = 258/365 (71%), Gaps = 4/365 (1%)
Strand=Plus/Minus
Query 36243 GCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAA 36302
|||| ||||| ||| |||| || ||||||||||| |||||||| | | |||||||| |
Sbjct 3233252 GCCAGAATATTGACACAAAAGAACCAGAAAAGAAGATTCCTTCCGCAGTGGCAAAGGCTA 3233193
Query 36303 TAA---GTCTCTCTCCATAACCGGCACTGTCATGTATCCACTTTTGAGCCCAATCGGCCT 36359
|| || | | || || | ||| ||||| | |||||||| || |
Sbjct 3233192 AAACATGTTCTTGTAGGTAGCCT-CTTTGTTCCCAATCCAACTCAAGGCCCAATCTGCTT 3233134
Query 36360 TCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTAT 36419
|| | || ||||||||||| | || |||||||| ||||| | | |||| ||| ||
Sbjct 3233133 TCCTCTTCACACAAGGCATCCTTTCAATAGCATTGGAGAGAAATTCCCTTTCTTTAGAAT 3233074
Query 36420 CTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCA 36479
|||||| || || ||||| | ||||| ||||||| ||||| |||||||| |||| |
Sbjct 3233073 CTTTAATGTAAGTGTCAATAAGGAGACTCTACATTTTAGAATGCATGTTTTCTGTGGCAA 3233014
Query 36480 TTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTG 36539
|| || || |||||||| | | || ||||| || |||||| | |||| |||
Sbjct 3233013 CCTGGAAGCCATAGAAACAGCCCACTTCTGTAATTTGAACTTCTTGGCTAAATTATTCCA 3232954
Query 36540 CTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAA 36599
| ||||||||||| |||| || ||||| |||||||| || |||| ||| | |||||
Sbjct 3232953 CCAAATTTTCATTTGCTATGCCATCACTTGCTGCAAAGAAAGCCAGGACAAGCAATATAA 3232894
Query 36600 AATAT 36604
|||||
Sbjct 3232893 AATAT 3232889
>seq260
Length=2306558
Score = 165 bits (182), Expect = 1e-35
Identities = 398/599 (66%), Gaps = 10/599 (2%)
Strand=Plus/Plus
Query 36143 TGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCG 36202
||||| ||||||| || || | || | ||| |||||| ||||| ||||| | |||
Sbjct 2180269 TGTTTGAACATCAGGCAAGCAGAGTCATAAAGTAAACCCTCATCTCTGCTAATAAGTTCA 2180328
Query 36203 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAAT 36262
|||||| | || || ||||| | || | || || | | | ||||| || ||||
Sbjct 2180329 CTGGAAAC--TTAGGCCAGGCATCAATCCCTGTTTCTTGAACTAGAATATTGATTCAAAA 2180386
Query 36263 GATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---A 36319
|| || | ||||| ||||||| || ||| ||||||| | || | |||| || |
Sbjct 2180387 GAAACATAGAAGAAGTTTCCTTCCACAGCCACAAAGGCTACAACACATTCTCTGTAGGTA 2180446
Query 36320 CCGGCACTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATT 36379
| | |||| ||||| | || ||| || || || |||||| ||||||||
Sbjct 2180447 GCTTCTTTGTCCCCAATCCAATGCAAGACCTAATTTGCTTTTTTCTTTACATAAGGCATT 2180506
Query 36380 GTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATC 36439
|| || || ||||| |||||| | | |||| || |||||| || || |||||
Sbjct 2180507 GTTTCAATGGCATTGAAGAGAAATTCCCTTTCTTTGAAATCTTT----TAAGTGTCAATA 2180562
Query 36440 AAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACAT 36499
| |||||||||||||| |||| | |||||| |||| ||||| || | ||||||||
Sbjct 2180563 AGGAGACTATACATTTCACAATGTAGTTTTTCA-TGGCAATTTGGAAGTCATAGAAACAG 2180621
Query 36500 CTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATT 36559
| | || ||||| || ||||| | |||| || | ||||||||||| |||||
Sbjct 2180622 TGAACTTCTGTAATTTGAACTTCCTGGCTTAATCACTCCACCAAATTTTCATTTACTATG 2180681
Query 36560 CCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTT 36619
|| ||||| |||||||| || || | ||| ||||||||| ||| | | | |
Sbjct 2180682 CCATCACTTGCTGCAAAGAAATTCATAATATGAGACATAAAATATCATTCCTCAGATTTC 2180741
Query 36620 AGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGAT 36679
|| | | | | || || || || ||| |||| || | |||| |||| ||
Sbjct 2180742 AGGGCTTCCTAGTGCAGAATGTCCTTGGAAATAGCCACCTCCCCATATGTCAAAAAGGAA 2180801
Query 36680 GCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 36738
| || ||||| ||| | || | ||| || ||||| ||| || ||||| | |||||
Sbjct 2180802 CCTTCAGCCTTCTTAGAAATCTGCCAAATATCATGGTATCTGATAGGAAAGAAGACAAA 2180860
>seq58
Length=10378366
Score = 152 bits (168), Expect = 7e-32
Identities = 489/753 (65%), Gaps = 47/753 (6%)
Strand=Plus/Plus
Query 35858 ACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAAT 35917
||||| || || || || ||| | || | || || || || ||||| || ||||| | |
Sbjct 1968513 ACTCCAATCTTCTGATACTCAACTACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGT 1968572
Query 35918 GATATATTTTCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCCCAAT 35977
|| ||||| ||||| | || | |||||| || | |||| | || | |||| |
Sbjct 1968573 GAAATATTCTCCATAATGTCAAGTGGATTTTCTACTCTGAAAATCTCGATAGAGCCCAGT 1968632
Query 35978 T-CAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCAT 36036
| ||| | | | || ||||| |||||||| || | ||||||| || |||||
Sbjct 1968633 TTCAGCA-TAAGCCTGTCTGCTACAAATTCAATGCACTGCTTCATCAAAGAGCAGTTCAT 1968691
Query 36037 TCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTC 36096
|| || || || || || | ||| || || || || ||||| || ||
Sbjct 1968692 CCCAATGAGCTTCACAGGCAAGGCCTTGGTGAGGAACTCCTGTTCTATCCTAAC------ 1968745
Query 36097 TGTTATAATAGATA-TTACTGTT----TCTTCACTCGGTGGATACAATAAATGTTTAAAC 36151
| ||| |||| ||||| || ||||| | | | | | || | ||| |||
Sbjct 1968746 ----AAAATTGATAATTACTTTTATCCTCTTCTCCCACAGTGTGTAGCAAGTATTTGAAC 1968801
Query 36152 ATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAAC 36211
|| | || || ||||| | || ||||| ||||| | ||| ||||||||
Sbjct 1968802 ATTGAGCAGGCAAAATCAC-----------TCATCTCTGCTAATAAGTTCATTGGAAAAT 1968850
Query 36212 GTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATG--GACGCAAATGATCCAG 36269
||||| || ||||| || | | || ||||| || ||||| || ||||| || ||||
Sbjct 1968851 GTGAGACCAGGCATCAGCCGTCATTTCTTAAGTCAGAATATATTGATGCAAAAGAACCAG 1968910
Query 36270 AAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGT 36329
||||||| ||| |||| || |||||||| | | ||||||| || | |||
Sbjct 1968911 AAAAGAAGATTTCTTCCACATTAGCAAAGGCTACATCATGCTCTCCACAAATAG-ACT-- 1968967
Query 36330 CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAG 36389
| ||||| || || |||| | ||||| || ||||||||||| | || |
Sbjct 1968968 -TTTTATCCTGATT----CCAAATCTGTTTTCTTCTTCACACAAGGCATCATTTCAGTGC 1969022
Query 36390 CATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTAT 36449
|||| |||| | | | |||||| || || |||| |||| |||| | | ||| |
Sbjct 1969023 CATTGAAGATAAATTCTTTTTCTTTGGAATTTTTA----ATGTGACAATAAGGAAACTGT 1969078
Query 36450 ACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGG 36509
| ||| | ||||| || ||| | ||||| ||||| ||||| |||||||| || || |
Sbjct 1969079 ATATTACAGAATGTATTTTTCCTATGGCAATTTGGAATCCATAGAAACAGTGGGCTTCTG 1969138
Query 36510 TAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGG 36569
|||| || | |||| | |||| | | | || ||||||| | ||| || ||||
Sbjct 1969139 TAATTTGAATTTCTTGGCTAAATTGCTTCACCAATTTTTCATGTATTATGCCATCAC--- 1969195
Query 36570 CTGCAAAAAACGCCAATACATGTTTTATAAAAT 36602
|||| |||| |||| |||||| ||||||||
Sbjct 1969196 CTGCTAAAA--GCCAGAACATGTGCTATAAAAT 1969226
>seq30
Length=14751797
Score = 122 bits (134), Expect = 1e-22
Identities = 109/137 (80%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 65181 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 65240
|| ||||||||||| ||||| ||||| ||||| || ||||| ||||| || ||||| |
Sbjct 820281 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTATAGATATTGCTGGTGTAAGGTTCAATG 820340
Query 65241 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 65300
||||||||||| |||| || ||||||||||| ||||| ||||| || || | | ||||
Sbjct 820341 GACTCATTATTCCCCAGGATCTGAGCAGTTGAAGCAGTAGGCATCGGGGCAATAAGTAAA 820400
Query 65301 CTATTTCTAAGACCGTA 65317
|| ||||| | ||| ||
Sbjct 820401 CTGTTTCTTACACCATA 820417
Score = 114 bits (126), Expect = 2e-20
Identities = 117/153 (76%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 66056 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCT 66115
|| ||| |||||||| |||||||| |||||||||||||| | || | ||| |||| ||
Sbjct 832087 CTCCACCCGTTTCATGAAGAGATCTGGAATCCAAAGAGCAAAGAAAAGATCCCTGGCTCG 832146
Query 66116 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCA 66175
|| ||||| |||||||| ||||| || | ||| |||||| | | || || |||||||
Sbjct 832147 CTGCTCCTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAACTCAAAGATGTCTAAATGCCA 832206
Query 66176 CGGTTCCAAGTATATGGCCATAACTCCAGGCCG 66208
||||||| ||| || || | ||||||| ||
Sbjct 832207 AGGTTCCAGGTAAATAGCAAATGCTCCAGGACG 832239
Score = 111 bits (122), Expect = 2e-19
Identities = 124/166 (75%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 66799 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAA 66858
|||| |||| ||| |||||||||||||| | || || || || ||||| || || | |
Sbjct 843145 CACTGAATACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACAGCAATTCTTGCTGCCAAGA 843204
Query 66859 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 66918
||||||| || || || | ||||| | || || ||| |||| || |||||||| || |
Sbjct 843205 TGGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAGAGTATCTA 843264
Query 66919 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 66964
||| || || || |||||| | |||| |||||||| || |||||
Sbjct 843265 GTTCCACTGTGGTAACTCCACTGTATAAGCCTTGGATTACTTTCAT 843310
>seq64
Length=9676502
Score = 111 bits (122), Expect = 2e-19
Identities = 97/121 (80%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 36180 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 36239
|||| ||||| ||||| | ||| |||||||| ||||| || ||||| || || || || |
Sbjct 6351547 CCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 6351488
Query 36240 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 36299
| ||||| ||||| || ||||| || ||||||||||| ||||| || || || |||||||
Sbjct 6351487 TGAGCCAGAATATTGAAGCAAAAGAACCAGAAAAGAAGATTCCCTCCACAGCAGCAAAGG 6351428
Query 36300 C 36300
|
Sbjct 6351427 C 6351427
Score = 93.3 bits (102), Expect = 6e-14
Identities = 92/119 (77%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 36419 TCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCC 36478
||||||| || || ||||| | |||||||||||||| ||||| |||||||| |||||
Sbjct 6349677 TCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGCA 6349618
Query 36479 ATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTC 36537
||||| || || |||||||| | || || |||| || |||||| | |||||| ||
Sbjct 6349617 ATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAACTTGAACTTCTTGGCTAAATCGCTC 6349559
>seq3
Length=41493964
Score = 105 bits (116), Expect = 9e-18
Identities = 148/207 (71%), Gaps = 3/207 (1%)
Strand=Plus/Plus
Query 33948 TTGTACTTCTTTCAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATC 34007
||| ||||||| | ||||||||| | || |||| | | || ||||| ||||||| |||
Sbjct 8287232 TTGAACTTCTTCTATATCTGGATAAAAAATCCGTTCACAAATGAGCTGTGCTATTCGATC 8287291
Query 34008 CCCCGTATTTACATTGAATGTACATTTTCCATTATTAATAAGAATGACTCCTATATTTCC 34067
|| | ||||| | || | ||| ||| ||||| | | || || ||||||||
Sbjct 8287292 ACCTTTTTTTACTTCAAACTTCTCTTTACCAAAATTAAACAACACAACACCAATATTTCC 8287351
Query 34068 CCTATAATCTTCGTCTATTACACCGCCTCCTATATCAAT---ACCTTTTAGGGACAGACC 34124
||||||||||| ||||| ||||| |||||| ||| || |||| | ||| ||
Sbjct 8287352 TCTATAATCTTCATCTATGACACCAGCTCCTACATCTATGAAGTATTTTGCAGCCAGGCC 8287411
Query 34125 AGACCTAGGAGCTATTCTACCATAGCA 34151
||| | ||||||||||| ||||||||
Sbjct 8287412 AGAACGTGGAGCTATTCTTCCATAGCA 8287438
>seq2
Length=46620681
Score = 102 bits (112), Expect = 1e-16
Identities = 94/119 (79%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 36182 TCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 36241
|| ||||| || || | ||| |||||||| ||||| || ||||| || || | ||| ||
Sbjct 41377775 TCATCTCTGCTGATCAGTTCATTGGAAAATGTGAGCCCAGGCATGAGACCTCTCTTCTTT 41377716
Query 36242 AGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGC 36300
||||| ||||| | ||||| ||||| || |||||||||||||| || || ||||||||
Sbjct 41377715 AGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCCTTCCACAGCAGCAAAGGC 41377657
Score = 86.0 bits (94), Expect = 8e-12
Identities = 70/85 (82%), Gaps = 0/85 (0%)
Strand=Plus/Minus
Query 36656 ACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGA 36715
|| ||||| ||||||| || ||||||| ||||| ||||||||| ||||| || ||| |
Sbjct 41366933 ACCTCTTCTGCTGTCCAGAAGGATGCCTGTGCCTGTTTATACATTTTCCAAATATCAGGG 41366874
Query 36716 TATTGAATTGGAAAAATAACAAATC 36740
|| || ||||||||||| |||||||
Sbjct 41366873 TACTGGATTGGAAAAATGACAAATC 41366849
>seq299
Length=1791600
Score = 95.1 bits (104), Expect = 2e-14
Identities = 106/142 (75%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 36598 AAAATATTTTTCGTTTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCAC 36657
|||||| || || | || | | || || ||| | | | || ||| || |||| || ||
Sbjct 1082285 AAAATAATTCTCATCTGATTTAAGCTTGTTCTAGTGAAGGAGATCCTTTGATAAGTCAAC 1082226
Query 36658 TTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATA 36717
||||| ||||||| || ||||||| ||||| || |||||| ||||| || ||| | ||
Sbjct 1082225 CTCTTCTGCTGTCCAGAAGGATGCCTGTGCCTGTTCATACATTTTCCAAATATCAGGGTA 1082166
Query 36718 TTGAATTGGAAAAATAACAAAT 36739
||||||||||| || ||||||
Sbjct 1082165 CTGAATTGGAAATATGACAAAT 1082144
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658070100361720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |