Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ictidomys_20tridecemlineatus_20[refseq_20GCF_5F000236235.1_202011-
11-29] 12,483 sequences; 2,478,393,770 total letters
Query= NC_003401.1
Length=133719
Score E
Sequences producing significant alignments: (Bits) Value
seq82 141 8e-29
>seq82
Length=8104705
Score = 141 bits (156), Expect = 8e-29
Identities = 129/163 (79%), Gaps = 0/163 (0%)
Strand=Plus/Plus
Query 20990 CAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGG 21049
||||||||||| ||| || |||| || || || |||| |||||||||||||| || ||
Sbjct 34501 CAGGCCCGTGATGTGTGCAATCATGTAGGTAAGCAGGGAATAGCTGGCGATGTTGAAGGG 34560
Query 21050 GACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGC 21109
|| || ||||||||||| | |||||||||||||||||||||||||||||||| |
Sbjct 34561 CACGCCCAGGCCCATGTCACCTGACCTCTGGTACAGCTGGCAGGACAGCTCCCCATTCAC 34620
Query 21110 CACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATC 21152
|||||| ||||| || | | || || ||||| || ||||||
Sbjct 34621 CACGTAGAACTGGCAGAGGGCATGGCATGGAGGCAGTGCCATC 34663
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427710919629840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |