Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ictidomys_20tridecemlineatus_20[refseq_20GCF_5F000236235.1_202011- 11-29] 12,483 sequences; 2,478,393,770 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq536 286 5e-72 seq131 185 1e-41 seq59 183 4e-41 seq58 174 2e-38 seq260 170 3e-37 seq64 123 4e-23 seq30 116 5e-21 seq3 114 2e-20 >seq536 Length=337149 Score = 286 bits (316), Expect = 5e-72 Identities = 636/945 (67%), Gaps = 42/945 (4%) Strand=Plus/Plus Query 49607 TGTTTCTTTAAAAGTCAACATCTAGAGAAAAATGATTATCTTCTTGA---GACATAACTC 49663 |||| ||||||||||| |||| | | |||| ||||||| | || ||||| |||| Sbjct 201724 TGTTCATTTAAAAGTCAGCATCCAAGGTAAAAGAATTATCTGTTGGATTCGACATCACTC 201783 Query 49664 CCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATA 49723 ||||||| || || || || || | || || || || |||||||| ||||| | ||| | Sbjct 201784 CCATTTTCTGATACTCGCCTACTCCCTTCTCAAAGAAGTTAGTTTTCCCTTCTAGTGAAA 201843 Query 49724 TATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAA-TTCA 49782 |||| ||||| || | ||| ||||| || || |||| || ||||| |||| |||| Sbjct 201844 TATTCTCCATAAAGTTAAATGGATTTTCTACTTTGAAAATCTTGTTAAAGCCCAGCTTCA 201903 Query 49783 GAAATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCT 49842 | | | | ||||| || |||||||| || || ||||||| |||||||| || Sbjct 201904 GCA-TAAGCCTATCTGCCACAAATTCAATGTACTGCTTCATCAAAGTGCAATTCATCCCA 201962 Query 49843 ATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTT 49902 || || || | || | || | || || || || || || || | |||| | Sbjct 201963 ATTAGCTTCTCAGGCAAGGCTTCTGTGAGGAACTCCTGATCTATCTTGAAGGCAT---TG 202019 Query 49903 ATAATAGAT-CTAACGGTTTCTTCACTC--GGTGGATGCAATAAATGTTTAAACATCAAA 49959 ||||| | | || | ||| | || ||| || | | ||||| | ||||| Sbjct 202020 ATAATTGTTTCTTTTACTCTCTGCTCTGATGGTTTGTGAAGCAGGTGTTTGAGCATCAGG 202079 Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || || || || ||||| | |||||| ||||| ||||| ||||| |||||||| ||||| Sbjct 202080 CAGGCAAAGTCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGG 202139 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079 || ||||| || || || || || ||||| ||||||||| Sbjct 202140 CCAGGCATCAGTCCTCGTTTCTTGAGCCA----------------------GAAAAGAAG 202177 Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGTCATGTATC 50139 |||| || | || |||||||| |||| | |||||||| | || || | ||| | Sbjct 202178 ATTCTGTCCATAGCAGCAAAGGCTACAACACGTTCTCCATAGGTAGC-CTCTT-TGTCCC 202235 Query 50140 CACTTT--TG--AGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 50195 || | || || || || ||| ||||| || ||||||||||| ||||| ||||||| Sbjct 202236 CAATCAAATGCAAGGCCCAT-GGCTTTCTTCTTCACACAAGGCATTGTTTCAGTGGCATT 202294 Query 50196 AAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACAT 50255 |||||| | | |||| || ||||||| |||||| || || | |||||||||||| Sbjct 202295 GAAGAGAAATTCCCTTTCTTTGAAGTCTTTAATATAAGTGTCAATAAGAAGACTATACAT 202354 Query 50256 TTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 50315 ||| ||||| |||||||| ||||| || || || || ||||||| | || || ||||| Sbjct 202355 TTCAGAATGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACTGCGGGCTTCTGTAAT 202414 Query 50316 CTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGC 50375 || |||||| | |||| | || | ||||| || || ||||| | |||| || || Sbjct 202415 TTGAACTTCTTGGCTAAATGGCTCCACCAAATTCTCCTTTACTATGCTATCACCTGCCGC 202474 Query 50376 AAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAATC 50435 | | || |||| | || |||||||| || ||| | || | || | ||| | Sbjct 202475 AGAGAAAGCCAGAATGTG-GATATAAAATATTGTTCCTCAGGCTTCAGGGCTTCCCAGTG 202533 Query 50436 ATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTT 50495 | || || | || | | | || || || |||||||||| || ||||| || || || Sbjct 202534 CTGAATGTCCCTGGA-AGAGCCACCTCCTCAGCTGTCCAAAAGGAAGCCTCAGCTTTCTT 202592 Query 50496 ATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 50540 | |||| | || ||| |||| | || || || || || || || Sbjct 202593 ACACATCTGCCGGATACCATGGTGTTCCATAGGAAAGATGACCAA 202637 >seq131 Length=5549739 Score = 185 bits (204), Expect = 1e-41 Identities = 260/363 (72%), Gaps = 4/363 (1%) Strand=Plus/Minus Query 50045 GCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGC-- 50102 |||| ||||| ||| |||| || |||||||||||||||||||| | | ||||||||| Sbjct 3233252 GCCAGAATATTGACACAAAAGAACCAGAAAAGAAGATTCCTTCCGCAGTGGCAAAGGCTA 3233193 Query 50103 -AACAAGTCTCTCTCCATAACTGGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCT 50161 |||| || | | || | | ||| ||||| | |||||||| || | Sbjct 3233192 AAACATGTTCTTGTAGGTAGCCT-CTTTGTTCCCAATCCAACTCAAGGCCCAATCTGCTT 3233134 Query 50162 TCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTAT 50221 || | || |||||||||||| |||| || ||||| ||||| | | |||| ||| || Sbjct 3233133 TCCTCTTCACACAAGGCATCCTTTCAATAGCATTGGAGAGAAATTCCCTTTCTTTAGAAT 3233074 Query 50222 CTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCA 50281 |||||| ||||| || || | ||||| ||||||| ||||| |||||||| |||| | Sbjct 3233073 CTTTAATGTAAGTGTCAATAAGGAGACTCTACATTTTAGAATGCATGTTTTCTGTGGCAA 3233014 Query 50282 TCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAG 50341 ||| || || |||||||| | | || ||||| || |||||| | |||| ||| Sbjct 3233013 CCTGGAAGCCATAGAAACAGCCCACTTCTGTAATTTGAACTTCTTGGCTAAATTATTCCA 3232954 Query 50342 CTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAA 50401 | ||||||||||| |||| || ||||| |||||||| || |||| ||| | ||||| Sbjct 3232953 CCAAATTTTCATTTGCTATGCCATCACTTGCTGCAAAGAAAGCCAGGACAAGCAATATAA 3232894 Query 50402 AAT 50404 ||| Sbjct 3232893 AAT 3232891 >seq59 Length=10161055 Score = 183 bits (202), Expect = 4e-41 Identities = 369/547 (67%), Gaps = 8/547 (1%) Strand=Plus/Minus Query 49973 AGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGC 50032 |||| | |||||||||||| || || ||||| |||||||| ||||| || ||||| || Sbjct 9902958 AGTGTAAACCCTCGTCTCTGCTGATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTT 9902899 Query 50033 CACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTG 50092 | || | ||||||||||| || |||||||| ||||||||||||||| || | | Sbjct 9902898 C-----TTATGAGCCAAAATATTGATGCAAATGAGCCAGAAAAGAAGATTTCTCCCGTAG 9902844 Query 50093 CGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CGCTGTCATGTATCCACTTTTGAG 50149 ||| ||| | |||| | | || || | | | |||| |||| | Sbjct 9902843 TGGCCAAGACTACAACACGTTTTCTGTAGGTAGCTTCTTTGTCCCCAGTCCAACACAAGG 9902784 Query 50150 CCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttt 50209 | || || || ||||| || || ||||||||| |||| |||||| | ||||| | | Sbjct 9902783 CACAGTCTGCTTTCTTCTTCACCCAAGGCATCATTTCAATGGCACTGGAGAGAAATTCCC 9902724 Query 50210 tttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGT 50269 | || | || ||||| ||| | || || | |||| ||| ||||| ||||| |||| Sbjct 9902723 TGTCTTAGGAATTTTTAATGTAAATGTCAATAAGGAGACCATATATTTCAGAATGTATGT 9902664 Query 50270 TTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTAC 50329 |||| || || | || || || ||||||| | || || |||| || || ||| | Sbjct 9902663 TTTCCATAGCAACTTGGAAGCCACAGAAACAGCCGGCTTCTATAATTTGAACCTCTTGGC 9902604 Query 50330 AAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATA 50389 |||||| | | | ||||||| | |||| || |||| ||| |||| || || | | Sbjct 9902603 TAAATCGCTGCACCAGATTTTCACTTGCTATGCCATCACGTGCTTCAAAGAAAGCTAGAA 9902544 Query 50390 CATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAATCATTGATATCTTTAG 50449 ||||| |||||||| | ||| | || | || | || | | | || || | Sbjct 9902543 CATGTGATATAAAATATCATTCCTCAGGCTTCAGGGCCTGCCGGTGCTGACTGTCCTTGG 9902484 Query 50450 ATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGA 50509 | | ||| || || ||| ||||||| || || ||||| || || |||||||| | ||| | Sbjct 9902483 AAAGATCCACCTCCTCCGCTGTCCAGAAGGACGCCTCGGCTTTCTTATACATTTGCCAAA 9902424 Query 50510 TGTCATG 50516 | ||||| Sbjct 9902423 TATCATG 9902417 >seq58 Length=10378366 Score = 174 bits (192), Expect = 2e-38 Identities = 496/749 (66%), Gaps = 39/749 (5%) Strand=Plus/Plus Query 49660 ACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAAT 49719 ||||| || || || || ||| | || | || || || || ||||| || ||||||| | Sbjct 1968513 ACTCCAATCTTCTGATACTCAACTACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGT 1968572 Query 49720 GATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAAT 49779 || ||||| ||||| | |||| ||||| || | |||| | || | |||| | Sbjct 1968573 GAAATATTCTCCATAATGTCAAGTGGATTTTCTACTCTGAAAATCTCGATAGAGCCCAGT 1968632 Query 49780 T-CAGAAATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCAT 49838 | ||| | | | || || || |||||||| || | ||||||| || ||||| Sbjct 1968633 TTCAGCA-TAAGCCTGTCTGCTACAAATTCAATGCACTGCTTCATCAAAGAGCAGTTCAT 1968691 Query 49839 TCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATC 49898 || || || || || || | ||| || || || || ||||| || || || Sbjct 1968692 CCCAATGAGCTTCACAGGCAAGGCCTTGGTGAGGAACTCCTGTTCTATCCTAACAAAAT- 1968750 Query 49899 TGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAA 49958 || || | || | || | |||| | | | ||| || | || | ||| ||||| | Sbjct 1968751 TGATA-ATTACTTTTATCCTCTTCTCC-CACAGTG--TGTAGCAAGTATTTGAACATTGA 1968806 Query 49959 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAG 50018 || || ||||| | || ||||| ||||| ||||| |||||||| ||||| Sbjct 1968807 GCAGGCAAAATCAC-----------TCATCTCTGCTAATAAGTTCATTGGAAAATGTGAG 1968855 Query 50019 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATG--GACGCAAATGACCCAGAAAAG 50076 || ||||| || | | || ||||| || ||||| || ||||| || ||||||||| Sbjct 1968856 ACCAGGCATCAGCCGTCATTTCTTAAGTCAGAATATATTGATGCAAAAGAACCAGAAAAG 1968915 Query 50077 AAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGTCATGT 50136 |||||| |||| || |||||||| ||| ||||||| || | | || | | Sbjct 1968916 AAGATTTCTTCCACATTAGCAAAGGCTACATCATGCTCTCCACAAATAG-ACT---TTTT 1968971 Query 50137 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 50196 |||| || || |||| | ||||| || |||||||||||| |||| || |||| Sbjct 1968972 ATCCTGATT----CCAAATCTGTTTTCTTCTTCACACAAGGCATCATTTCAGTGCCATTG 1969027 Query 50197 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 50256 |||| | | | |||||| || || |||| | || | || | | ||| || ||| Sbjct 1969028 AAGATAAATTCTTTTTCTTTGGAATTTTTA----ATGTGACAATAAGGAAACTGTATATT 1969083 Query 50257 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 50316 | ||||| || ||| | ||||| || || ||||| |||||||| || || ||||| Sbjct 1969084 ACAGAATGTATTTTTCCTATGGCAATTTGGAATCCATAGAAACAGTGGGCTTCTGTAATT 1969143 Query 50317 TGCACTTCTGTACAAAATCG-TTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGC 50375 || | |||| | |||| | |||| | || ||||||| | ||| || |||| |||| Sbjct 1969144 TGAATTTCTTGGCTAAATTGCTTCA-CCAATTTTTCATGTATTATGCCATCAC---CTGC 1969199 Query 50376 AAAAAACGCCAATACATGTTTTATAAAAT 50404 |||| |||| |||||| |||||||| Sbjct 1969200 TAAAA--GCCAGAACATGTGCTATAAAAT 1969226 >seq260 Length=2306558 Score = 170 bits (188), Expect = 3e-37 Identities = 519/788 (66%), Gaps = 22/788 (3%) Strand=Plus/Plus Query 49604 TTATGTTTCTTTAAAAGTCAACATCTAGAGAAAAATGATTATCTTCTTGA---GACATAA 49660 || |||| |||| |||||| |||| | | ||||| ||| || | || ||||| Sbjct 2179926 TTCTGTTCATTTAGAAGTCAGCATCCAAGGTAAAATAATTCCCTGTTGGATTTGACATCT 2179985 Query 49661 CTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATG 49720 |||||| | || || ||||| || || || || || ||| | || |||||| | Sbjct 2179986 CTCCCACCCTCTGATACTCACCTACTTTCTTCTCAAAGAAGTTAATCTTGTCTTCCATTA 2180045 Query 49721 ATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAA-T 49779 | ||||| ||||| || ||||| | ||| || | ||| || |||| |||| | Sbjct 2180046 A-ATATTCTCCATAAAGTCAAATGAATTTTCTACTCTGAAAACCTTGCTAAAGCCCAGCT 2180104 Query 49780 TCAGAAATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATT 49839 ||| | | || || | || || ||||| ||||| ||||||| || || || Sbjct 2180105 TCATCA-TAAACCTGTGTGCCACGAATTCAATATACTGCTTCATCAAAGTGCAGTTTATC 2180163 Query 49840 CCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCT 49899 || | | || || || | |||| | | | || || ||||| | | || |||| | Sbjct 2180164 CCAGTGAACTTCACAGGCAAAGCCTCCATGATGAACTCCTGTTCTAAGCTGACAGCAT-T 2180222 Query 49900 GTTATAATAGATCTA--ACGGTTT-CTTCACTCGGTGGATGCAATAAATGTTTAAACATC 49956 | || |||| ||| || | | || || | | | | || | | ||||| |||||| Sbjct 2180223 GATA-AATATTTCTTTTACTCTCTGCTCCAATGGTTTG-TGTAGCAGGTGTTTGAACATC 2180280 Query 49957 AAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTG 50016 | || || | || | | | |||||| ||||| ||||| ||||| |||||| | Sbjct 2180281 AGGCAAGCAGAGTCATAAAGTAAACCCTCATCTCTGCTAATAAGTTCACTGGAAAC--TT 2180338 Query 50017 AGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAG 50076 || || ||||| | || | || || | | | ||||| || |||| || || | ||| Sbjct 2180339 AGGCCAGGCATCAATCCCTGTTTCTTGAACTAGAATATTGATTCAAAAGAAACATAGAAG 2180398 Query 50077 AAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGC---TGTCA 50133 ||| ||||||| || || ||||||| |||| | |||| || | || |||| Sbjct 2180399 AAGTTTCCTTCCACAGCCACAAAGGCTACAACACATTCTCTGTAGGTAGCTTCTTTGTCC 2180458 Query 50134 TGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCA 50193 ||||| | || ||| || || || |||||| ||||||| ||||| |||||| Sbjct 2180459 CCAATCCAATGCAAGACCTAATTTGCTTTTTTCTTTACATAAGGCATTGTTTCAATGGCA 2180518 Query 50194 TTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATAC 50253 || |||||| | | |||| || |||||| ||||| || || | ||||||||| Sbjct 2180519 TTGAAGAGAAATTCCCTTTCTTTGAAATCTTT----TAAGTGTCAATAAGGAGACTATAC 2180574 Query 50254 ATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTA 50313 ||||| |||| | |||||| |||| || || || | |||||||| | | || ||| Sbjct 2180575 ATTTCACAATGTAGTTTTTCA-TGGCAATTTGGAAGTCATAGAAACAGTGAACTTCTGTA 2180633 Query 50314 ATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCT 50373 || || ||||| | |||| || | ||||||||||| ||||| || ||||| ||| Sbjct 2180634 ATTTGAACTTCCTGGCTTAATCACTCCACCAAATTTTCATTTACTATGCCATCACTTGCT 2180693 Query 50374 GCAAAAAA 50381 ||||| || Sbjct 2180694 GCAAAGAA 2180701 >seq64 Length=9676502 Score = 123 bits (136), Expect = 4e-23 Identities = 103/126 (82%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 49982 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 50041 |||| ||||| ||||| ||||| |||||||| ||||| || ||||| || || || || | Sbjct 6351547 CCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 6351488 Query 50042 TAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGG 50101 | ||||| ||||| || ||||| || ||||||||||||||||| || || || ||||||| Sbjct 6351487 TGAGCCAGAATATTGAAGCAAAAGAACCAGAAAAGAAGATTCCCTCCACAGCAGCAAAGG 6351428 Query 50102 CAACAA 50107 | |||| Sbjct 6351427 CTACAA 6351422 Score = 89.7 bits (98), Expect = 7e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 50221 TCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCC 50280 ||||||| ||||| || || | |||||||||||||| ||||| |||||||| ||||| Sbjct 6349677 TCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGCA 6349618 Query 50281 ATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTC 50339 || || || || |||||||| | || || |||| || |||||| | |||||| || Sbjct 6349617 ATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAACTTGAACTTCTTGGCTAAATCGCTC 6349559 >seq30 Length=14751797 Score = 116 bits (128), Expect = 5e-21 Identities = 106/134 (79%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 79939 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 79998 || |||||||| |||||||| |||||||||||||| | || ||||| |||| || ||| Sbjct 832091 ACCCGTTTCATGAAGAGATCTGGAATCCAAAGAGCAAAGAAAAGATCCCTGGCTCGCTGC 832150 Query 79999 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 80058 ||||| |||||||| ||||| || | ||| |||||| | | || || ||||||| ||| Sbjct 832151 TCCTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAACTCAAAGATGTCTAAATGCCAAGGT 832210 Query 80059 TCCAAGTATATGGC 80072 |||| ||| || || Sbjct 832211 TCCAGGTAAATAGC 832224 Score = 113 bits (124), Expect = 6e-20 Identities = 107/137 (78%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 79060 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACC 79119 || ||||||||||| ||||| ||||| ||||| || ||||| ||||| || ||||| | Sbjct 820281 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTATAGATATTGCTGGTGTAAGGTTCAATG 820340 Query 79120 GATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAA 79179 || |||||||| |||| || ||||||||||| || || ||||| || || | | |||| Sbjct 820341 GACTCATTATTCCCCAGGATCTGAGCAGTTGAAGCAGTAGGCATCGGGGCAATAAGTAAA 820400 Query 79180 CTATTTCTAAGACCGTA 79196 || ||||| | ||| || Sbjct 820401 CTGTTTCTTACACCATA 820417 >seq3 Length=41493964 Score = 114 bits (126), Expect = 2e-20 Identities = 150/207 (72%), Gaps = 3/207 (1%) Strand=Plus/Plus Query 47751 TTGTACTTCCTCCAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATC 47810 ||| ||||| || | ||||||||| | || |||| | | || ||||| ||||||| ||| Sbjct 8287232 TTGAACTTCTTCTATATCTGGATAAAAAATCCGTTCACAAATGAGCTGTGCTATTCGATC 8287291 Query 47811 TCCCGTATTTACATTGAACGTACATTTTCCATTATTAATAAGAATGACTCCTATGTTTCC 47870 || | ||||| | ||| | ||| ||| ||||| | | || || || ||||| Sbjct 8287292 ACCTTTTTTTACTTCAAACTTCTCTTTACCAAAATTAAACAACACAACACCAATATTTCC 8287351 Query 47871 CCTATAATCTTCGTCTATTACACCACCTCCTATATCAAT---GCCTTTTAGTGACAGTCC 47927 ||||||||||| ||||| |||||| |||||| ||| || | |||| | ||| || Sbjct 8287352 TCTATAATCTTCATCTATGACACCAGCTCCTACATCTATGAAGTATTTTGCAGCCAGGCC 8287411 Query 47928 AGACCTAGGAGCTATTCTACCATAGCA 47954 ||| | ||||||||||| |||||||| Sbjct 8287412 AGAACGTGGAGCTATTCTTCCATAGCA 8287438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718156723132120