Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ictidomys_20tridecemlineatus_20[refseq_20GCF_5F000236235.1_202011-
11-29] 12,483 sequences; 2,478,393,770 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq536 286 5e-72
seq131 185 1e-41
seq59 183 4e-41
seq58 174 2e-38
seq260 170 3e-37
seq64 123 4e-23
seq30 116 5e-21
seq3 114 2e-20
>seq536
Length=337149
Score = 286 bits (316), Expect = 5e-72
Identities = 636/945 (67%), Gaps = 42/945 (4%)
Strand=Plus/Plus
Query 49607 TGTTTCTTTAAAAGTCAACATCTAGAGAAAAATGATTATCTTCTTGA---GACATAACTC 49663
|||| ||||||||||| |||| | | |||| ||||||| | || ||||| ||||
Sbjct 201724 TGTTCATTTAAAAGTCAGCATCCAAGGTAAAAGAATTATCTGTTGGATTCGACATCACTC 201783
Query 49664 CCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATA 49723
||||||| || || || || || | || || || || |||||||| ||||| | ||| |
Sbjct 201784 CCATTTTCTGATACTCGCCTACTCCCTTCTCAAAGAAGTTAGTTTTCCCTTCTAGTGAAA 201843
Query 49724 TATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAA-TTCA 49782
|||| ||||| || | ||| ||||| || || |||| || ||||| |||| ||||
Sbjct 201844 TATTCTCCATAAAGTTAAATGGATTTTCTACTTTGAAAATCTTGTTAAAGCCCAGCTTCA 201903
Query 49783 GAAATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCT 49842
| | | | ||||| || |||||||| || || ||||||| |||||||| ||
Sbjct 201904 GCA-TAAGCCTATCTGCCACAAATTCAATGTACTGCTTCATCAAAGTGCAATTCATCCCA 201962
Query 49843 ATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTT 49902
|| || || | || | || | || || || || || || || | |||| |
Sbjct 201963 ATTAGCTTCTCAGGCAAGGCTTCTGTGAGGAACTCCTGATCTATCTTGAAGGCAT---TG 202019
Query 49903 ATAATAGAT-CTAACGGTTTCTTCACTC--GGTGGATGCAATAAATGTTTAAACATCAAA 49959
||||| | | || | ||| | || ||| || | | ||||| | |||||
Sbjct 202020 ATAATTGTTTCTTTTACTCTCTGCTCTGATGGTTTGTGAAGCAGGTGTTTGAGCATCAGG 202079
Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019
|| || || || ||||| | |||||| ||||| ||||| ||||| |||||||| |||||
Sbjct 202080 CAGGCAAAGTCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGG 202139
Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079
|| ||||| || || || || || ||||| |||||||||
Sbjct 202140 CCAGGCATCAGTCCTCGTTTCTTGAGCCA----------------------GAAAAGAAG 202177
Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGTCATGTATC 50139
|||| || | || |||||||| |||| | |||||||| | || || | ||| |
Sbjct 202178 ATTCTGTCCATAGCAGCAAAGGCTACAACACGTTCTCCATAGGTAGC-CTCTT-TGTCCC 202235
Query 50140 CACTTT--TG--AGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 50195
|| | || || || || ||| ||||| || ||||||||||| ||||| |||||||
Sbjct 202236 CAATCAAATGCAAGGCCCAT-GGCTTTCTTCTTCACACAAGGCATTGTTTCAGTGGCATT 202294
Query 50196 AAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACAT 50255
|||||| | | |||| || ||||||| |||||| || || | ||||||||||||
Sbjct 202295 GAAGAGAAATTCCCTTTCTTTGAAGTCTTTAATATAAGTGTCAATAAGAAGACTATACAT 202354
Query 50256 TTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 50315
||| ||||| |||||||| ||||| || || || || ||||||| | || || |||||
Sbjct 202355 TTCAGAATGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACTGCGGGCTTCTGTAAT 202414
Query 50316 CTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGC 50375
|| |||||| | |||| | || | ||||| || || ||||| | |||| || ||
Sbjct 202415 TTGAACTTCTTGGCTAAATGGCTCCACCAAATTCTCCTTTACTATGCTATCACCTGCCGC 202474
Query 50376 AAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAATC 50435
| | || |||| | || |||||||| || ||| | || | || | ||| |
Sbjct 202475 AGAGAAAGCCAGAATGTG-GATATAAAATATTGTTCCTCAGGCTTCAGGGCTTCCCAGTG 202533
Query 50436 ATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTT 50495
| || || | || | | | || || || |||||||||| || ||||| || || ||
Sbjct 202534 CTGAATGTCCCTGGA-AGAGCCACCTCCTCAGCTGTCCAAAAGGAAGCCTCAGCTTTCTT 202592
Query 50496 ATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 50540
| |||| | || ||| |||| | || || || || || || ||
Sbjct 202593 ACACATCTGCCGGATACCATGGTGTTCCATAGGAAAGATGACCAA 202637
>seq131
Length=5549739
Score = 185 bits (204), Expect = 1e-41
Identities = 260/363 (72%), Gaps = 4/363 (1%)
Strand=Plus/Minus
Query 50045 GCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGC-- 50102
|||| ||||| ||| |||| || |||||||||||||||||||| | | |||||||||
Sbjct 3233252 GCCAGAATATTGACACAAAAGAACCAGAAAAGAAGATTCCTTCCGCAGTGGCAAAGGCTA 3233193
Query 50103 -AACAAGTCTCTCTCCATAACTGGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCT 50161
|||| || | | || | | ||| ||||| | |||||||| || |
Sbjct 3233192 AAACATGTTCTTGTAGGTAGCCT-CTTTGTTCCCAATCCAACTCAAGGCCCAATCTGCTT 3233134
Query 50162 TCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTAT 50221
|| | || |||||||||||| |||| || ||||| ||||| | | |||| ||| ||
Sbjct 3233133 TCCTCTTCACACAAGGCATCCTTTCAATAGCATTGGAGAGAAATTCCCTTTCTTTAGAAT 3233074
Query 50222 CTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCA 50281
|||||| ||||| || || | ||||| ||||||| ||||| |||||||| |||| |
Sbjct 3233073 CTTTAATGTAAGTGTCAATAAGGAGACTCTACATTTTAGAATGCATGTTTTCTGTGGCAA 3233014
Query 50282 TCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAG 50341
||| || || |||||||| | | || ||||| || |||||| | |||| |||
Sbjct 3233013 CCTGGAAGCCATAGAAACAGCCCACTTCTGTAATTTGAACTTCTTGGCTAAATTATTCCA 3232954
Query 50342 CTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAA 50401
| ||||||||||| |||| || ||||| |||||||| || |||| ||| | |||||
Sbjct 3232953 CCAAATTTTCATTTGCTATGCCATCACTTGCTGCAAAGAAAGCCAGGACAAGCAATATAA 3232894
Query 50402 AAT 50404
|||
Sbjct 3232893 AAT 3232891
>seq59
Length=10161055
Score = 183 bits (202), Expect = 4e-41
Identities = 369/547 (67%), Gaps = 8/547 (1%)
Strand=Plus/Minus
Query 49973 AGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGC 50032
|||| | |||||||||||| || || ||||| |||||||| ||||| || ||||| ||
Sbjct 9902958 AGTGTAAACCCTCGTCTCTGCTGATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTT 9902899
Query 50033 CACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTG 50092
| || | ||||||||||| || |||||||| ||||||||||||||| || | |
Sbjct 9902898 C-----TTATGAGCCAAAATATTGATGCAAATGAGCCAGAAAAGAAGATTTCTCCCGTAG 9902844
Query 50093 CGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CGCTGTCATGTATCCACTTTTGAG 50149
||| ||| | |||| | | || || | | | |||| |||| |
Sbjct 9902843 TGGCCAAGACTACAACACGTTTTCTGTAGGTAGCTTCTTTGTCCCCAGTCCAACACAAGG 9902784
Query 50150 CCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttt 50209
| || || || ||||| || || ||||||||| |||| |||||| | ||||| | |
Sbjct 9902783 CACAGTCTGCTTTCTTCTTCACCCAAGGCATCATTTCAATGGCACTGGAGAGAAATTCCC 9902724
Query 50210 tttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGT 50269
| || | || ||||| ||| | || || | |||| ||| ||||| ||||| ||||
Sbjct 9902723 TGTCTTAGGAATTTTTAATGTAAATGTCAATAAGGAGACCATATATTTCAGAATGTATGT 9902664
Query 50270 TTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTAC 50329
|||| || || | || || || ||||||| | || || |||| || || ||| |
Sbjct 9902663 TTTCCATAGCAACTTGGAAGCCACAGAAACAGCCGGCTTCTATAATTTGAACCTCTTGGC 9902604
Query 50330 AAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATA 50389
|||||| | | | ||||||| | |||| || |||| ||| |||| || || | |
Sbjct 9902603 TAAATCGCTGCACCAGATTTTCACTTGCTATGCCATCACGTGCTTCAAAGAAAGCTAGAA 9902544
Query 50390 CATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAATCATTGATATCTTTAG 50449
||||| |||||||| | ||| | || | || | || | | | || || |
Sbjct 9902543 CATGTGATATAAAATATCATTCCTCAGGCTTCAGGGCCTGCCGGTGCTGACTGTCCTTGG 9902484
Query 50450 ATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGA 50509
| | ||| || || ||| ||||||| || || ||||| || || |||||||| | ||| |
Sbjct 9902483 AAAGATCCACCTCCTCCGCTGTCCAGAAGGACGCCTCGGCTTTCTTATACATTTGCCAAA 9902424
Query 50510 TGTCATG 50516
| |||||
Sbjct 9902423 TATCATG 9902417
>seq58
Length=10378366
Score = 174 bits (192), Expect = 2e-38
Identities = 496/749 (66%), Gaps = 39/749 (5%)
Strand=Plus/Plus
Query 49660 ACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAAT 49719
||||| || || || || ||| | || | || || || || ||||| || ||||||| |
Sbjct 1968513 ACTCCAATCTTCTGATACTCAACTACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGT 1968572
Query 49720 GATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAAT 49779
|| ||||| ||||| | |||| ||||| || | |||| | || | |||| |
Sbjct 1968573 GAAATATTCTCCATAATGTCAAGTGGATTTTCTACTCTGAAAATCTCGATAGAGCCCAGT 1968632
Query 49780 T-CAGAAATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCAT 49838
| ||| | | | || || || |||||||| || | ||||||| || |||||
Sbjct 1968633 TTCAGCA-TAAGCCTGTCTGCTACAAATTCAATGCACTGCTTCATCAAAGAGCAGTTCAT 1968691
Query 49839 TCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATC 49898
|| || || || || || | ||| || || || || ||||| || || ||
Sbjct 1968692 CCCAATGAGCTTCACAGGCAAGGCCTTGGTGAGGAACTCCTGTTCTATCCTAACAAAAT- 1968750
Query 49899 TGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAA 49958
|| || | || | || | |||| | | | ||| || | || | ||| ||||| |
Sbjct 1968751 TGATA-ATTACTTTTATCCTCTTCTCC-CACAGTG--TGTAGCAAGTATTTGAACATTGA 1968806
Query 49959 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAG 50018
|| || ||||| | || ||||| ||||| ||||| |||||||| |||||
Sbjct 1968807 GCAGGCAAAATCAC-----------TCATCTCTGCTAATAAGTTCATTGGAAAATGTGAG 1968855
Query 50019 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATG--GACGCAAATGACCCAGAAAAG 50076
|| ||||| || | | || ||||| || ||||| || ||||| || |||||||||
Sbjct 1968856 ACCAGGCATCAGCCGTCATTTCTTAAGTCAGAATATATTGATGCAAAAGAACCAGAAAAG 1968915
Query 50077 AAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGTCATGT 50136
|||||| |||| || |||||||| ||| ||||||| || | | || | |
Sbjct 1968916 AAGATTTCTTCCACATTAGCAAAGGCTACATCATGCTCTCCACAAATAG-ACT---TTTT 1968971
Query 50137 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 50196
|||| || || |||| | ||||| || |||||||||||| |||| || ||||
Sbjct 1968972 ATCCTGATT----CCAAATCTGTTTTCTTCTTCACACAAGGCATCATTTCAGTGCCATTG 1969027
Query 50197 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 50256
|||| | | | |||||| || || |||| | || | || | | ||| || |||
Sbjct 1969028 AAGATAAATTCTTTTTCTTTGGAATTTTTA----ATGTGACAATAAGGAAACTGTATATT 1969083
Query 50257 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 50316
| ||||| || ||| | ||||| || || ||||| |||||||| || || |||||
Sbjct 1969084 ACAGAATGTATTTTTCCTATGGCAATTTGGAATCCATAGAAACAGTGGGCTTCTGTAATT 1969143
Query 50317 TGCACTTCTGTACAAAATCG-TTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGC 50375
|| | |||| | |||| | |||| | || ||||||| | ||| || |||| ||||
Sbjct 1969144 TGAATTTCTTGGCTAAATTGCTTCA-CCAATTTTTCATGTATTATGCCATCAC---CTGC 1969199
Query 50376 AAAAAACGCCAATACATGTTTTATAAAAT 50404
|||| |||| |||||| ||||||||
Sbjct 1969200 TAAAA--GCCAGAACATGTGCTATAAAAT 1969226
>seq260
Length=2306558
Score = 170 bits (188), Expect = 3e-37
Identities = 519/788 (66%), Gaps = 22/788 (3%)
Strand=Plus/Plus
Query 49604 TTATGTTTCTTTAAAAGTCAACATCTAGAGAAAAATGATTATCTTCTTGA---GACATAA 49660
|| |||| |||| |||||| |||| | | ||||| ||| || | || |||||
Sbjct 2179926 TTCTGTTCATTTAGAAGTCAGCATCCAAGGTAAAATAATTCCCTGTTGGATTTGACATCT 2179985
Query 49661 CTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATG 49720
|||||| | || || ||||| || || || || || ||| | || |||||| |
Sbjct 2179986 CTCCCACCCTCTGATACTCACCTACTTTCTTCTCAAAGAAGTTAATCTTGTCTTCCATTA 2180045
Query 49721 ATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAA-T 49779
| ||||| ||||| || ||||| | ||| || | ||| || |||| |||| |
Sbjct 2180046 A-ATATTCTCCATAAAGTCAAATGAATTTTCTACTCTGAAAACCTTGCTAAAGCCCAGCT 2180104
Query 49780 TCAGAAATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATT 49839
||| | | || || | || || ||||| ||||| ||||||| || || ||
Sbjct 2180105 TCATCA-TAAACCTGTGTGCCACGAATTCAATATACTGCTTCATCAAAGTGCAGTTTATC 2180163
Query 49840 CCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCT 49899
|| | | || || || | |||| | | | || || ||||| | | || |||| |
Sbjct 2180164 CCAGTGAACTTCACAGGCAAAGCCTCCATGATGAACTCCTGTTCTAAGCTGACAGCAT-T 2180222
Query 49900 GTTATAATAGATCTA--ACGGTTT-CTTCACTCGGTGGATGCAATAAATGTTTAAACATC 49956
| || |||| ||| || | | || || | | | | || | | ||||| ||||||
Sbjct 2180223 GATA-AATATTTCTTTTACTCTCTGCTCCAATGGTTTG-TGTAGCAGGTGTTTGAACATC 2180280
Query 49957 AAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTG 50016
| || || | || | | | |||||| ||||| ||||| ||||| |||||| |
Sbjct 2180281 AGGCAAGCAGAGTCATAAAGTAAACCCTCATCTCTGCTAATAAGTTCACTGGAAAC--TT 2180338
Query 50017 AGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAG 50076
|| || ||||| | || | || || | | | ||||| || |||| || || | |||
Sbjct 2180339 AGGCCAGGCATCAATCCCTGTTTCTTGAACTAGAATATTGATTCAAAAGAAACATAGAAG 2180398
Query 50077 AAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGC---TGTCA 50133
||| ||||||| || || ||||||| |||| | |||| || | || ||||
Sbjct 2180399 AAGTTTCCTTCCACAGCCACAAAGGCTACAACACATTCTCTGTAGGTAGCTTCTTTGTCC 2180458
Query 50134 TGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCA 50193
||||| | || ||| || || || |||||| ||||||| ||||| ||||||
Sbjct 2180459 CCAATCCAATGCAAGACCTAATTTGCTTTTTTCTTTACATAAGGCATTGTTTCAATGGCA 2180518
Query 50194 TTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATAC 50253
|| |||||| | | |||| || |||||| ||||| || || | |||||||||
Sbjct 2180519 TTGAAGAGAAATTCCCTTTCTTTGAAATCTTT----TAAGTGTCAATAAGGAGACTATAC 2180574
Query 50254 ATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTA 50313
||||| |||| | |||||| |||| || || || | |||||||| | | || |||
Sbjct 2180575 ATTTCACAATGTAGTTTTTCA-TGGCAATTTGGAAGTCATAGAAACAGTGAACTTCTGTA 2180633
Query 50314 ATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCT 50373
|| || ||||| | |||| || | ||||||||||| ||||| || ||||| |||
Sbjct 2180634 ATTTGAACTTCCTGGCTTAATCACTCCACCAAATTTTCATTTACTATGCCATCACTTGCT 2180693
Query 50374 GCAAAAAA 50381
||||| ||
Sbjct 2180694 GCAAAGAA 2180701
>seq64
Length=9676502
Score = 123 bits (136), Expect = 4e-23
Identities = 103/126 (82%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 49982 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 50041
|||| ||||| ||||| ||||| |||||||| ||||| || ||||| || || || || |
Sbjct 6351547 CCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 6351488
Query 50042 TAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGG 50101
| ||||| ||||| || ||||| || ||||||||||||||||| || || || |||||||
Sbjct 6351487 TGAGCCAGAATATTGAAGCAAAAGAACCAGAAAAGAAGATTCCCTCCACAGCAGCAAAGG 6351428
Query 50102 CAACAA 50107
| ||||
Sbjct 6351427 CTACAA 6351422
Score = 89.7 bits (98), Expect = 7e-13
Identities = 91/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 50221 TCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCC 50280
||||||| ||||| || || | |||||||||||||| ||||| |||||||| |||||
Sbjct 6349677 TCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGCA 6349618
Query 50281 ATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTC 50339
|| || || || |||||||| | || || |||| || |||||| | |||||| ||
Sbjct 6349617 ATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAACTTGAACTTCTTGGCTAAATCGCTC 6349559
>seq30
Length=14751797
Score = 116 bits (128), Expect = 5e-21
Identities = 106/134 (79%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 79939 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 79998
|| |||||||| |||||||| |||||||||||||| | || ||||| |||| || |||
Sbjct 832091 ACCCGTTTCATGAAGAGATCTGGAATCCAAAGAGCAAAGAAAAGATCCCTGGCTCGCTGC 832150
Query 79999 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 80058
||||| |||||||| ||||| || | ||| |||||| | | || || ||||||| |||
Sbjct 832151 TCCTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAACTCAAAGATGTCTAAATGCCAAGGT 832210
Query 80059 TCCAAGTATATGGC 80072
|||| ||| || ||
Sbjct 832211 TCCAGGTAAATAGC 832224
Score = 113 bits (124), Expect = 6e-20
Identities = 107/137 (78%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 79060 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACC 79119
|| ||||||||||| ||||| ||||| ||||| || ||||| ||||| || ||||| |
Sbjct 820281 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTATAGATATTGCTGGTGTAAGGTTCAATG 820340
Query 79120 GATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAA 79179
|| |||||||| |||| || ||||||||||| || || ||||| || || | | ||||
Sbjct 820341 GACTCATTATTCCCCAGGATCTGAGCAGTTGAAGCAGTAGGCATCGGGGCAATAAGTAAA 820400
Query 79180 CTATTTCTAAGACCGTA 79196
|| ||||| | ||| ||
Sbjct 820401 CTGTTTCTTACACCATA 820417
>seq3
Length=41493964
Score = 114 bits (126), Expect = 2e-20
Identities = 150/207 (72%), Gaps = 3/207 (1%)
Strand=Plus/Plus
Query 47751 TTGTACTTCCTCCAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATC 47810
||| ||||| || | ||||||||| | || |||| | | || ||||| ||||||| |||
Sbjct 8287232 TTGAACTTCTTCTATATCTGGATAAAAAATCCGTTCACAAATGAGCTGTGCTATTCGATC 8287291
Query 47811 TCCCGTATTTACATTGAACGTACATTTTCCATTATTAATAAGAATGACTCCTATGTTTCC 47870
|| | ||||| | ||| | ||| ||| ||||| | | || || || |||||
Sbjct 8287292 ACCTTTTTTTACTTCAAACTTCTCTTTACCAAAATTAAACAACACAACACCAATATTTCC 8287351
Query 47871 CCTATAATCTTCGTCTATTACACCACCTCCTATATCAAT---GCCTTTTAGTGACAGTCC 47927
||||||||||| ||||| |||||| |||||| ||| || | |||| | ||| ||
Sbjct 8287352 TCTATAATCTTCATCTATGACACCAGCTCCTACATCTATGAAGTATTTTGCAGCCAGGCC 8287411
Query 47928 AGACCTAGGAGCTATTCTACCATAGCA 47954
||| | ||||||||||| ||||||||
Sbjct 8287412 AGAACGTGGAGCTATTCTTCCATAGCA 8287438
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718156723132120
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