Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ictidomys_20tridecemlineatus_20[refseq_20GCF_5F000236235.1_202011-
11-29] 12,483 sequences; 2,478,393,770 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq536 244 1e-59
seq260 176 4e-39
seq58 149 6e-31
seq131 140 3e-28
seq64 138 1e-27
seq59 127 2e-24
seq299 120 3e-22
seq11673 104 2e-17
seq3 95.1 1e-14
>seq536
Length=337149
Score = 244 bits (270), Expect = 1e-59
Identities = 599/900 (67%), Gaps = 40/900 (4%)
Strand=Plus/Plus
Query 13524 TAAAAATCAACATCTAATGAAAAAACATTATCGTCTTTG-TTAGAAATAACGCCCATTTT 13582
||||| ||| |||| || | |||| |||||| | || | || || || || ||||||||
Sbjct 201732 TAAAAGTCAGCATCCAAGGTAAAAGAATTATC-TGTTGGATTCGACATCACTCCCATTTT 201790
Query 13583 TTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTC 13642
||||| || | |||| || ||||||||||||||||| ||||| ||||| ||||| ||
Sbjct 201791 CTGATACTCGCCTACTCCCTTCTCAAAGAAGTTAGTTTTCCCTTCTAGTGAAATATTCTC 201850
Query 13643 CATAAAATCAAATGGATTTATTGACATAAACACTTTATCACAACCTAGTTCTAATAGTAA 13702
|||||| | |||||||||| | | || | || | | | || || | | | |
Sbjct 201851 CATAAAGTTAAATGGATTTTCTACTTTGAAAATCTTGTTAAAGCCCAGCTTCAGCATAAG 201910
Query 13703 TCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTT 13762
||||| || | ||| ||||| || || ||| ||| |||||||| || ||||| ||
Sbjct 201911 CCTATCTGCCACAAATTCAATGTACTGCTTCATCAAAGTGCAATTCATCCCAATTAGCTT 201970
Query 13763 TACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATAATAAT 13822
|||| | | || | || || | ||||| | || | | ||||| |
Sbjct 201971 CTCAGGCAAGGCTTCTGTGAGGAACTCCTGATCTATCTTGAAGGCAT---TGATAATTGT 202027
Query 13823 TG-TAATAATCTCA--TTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAA 13879
| | || |||| | || || | || ||||| | || | || |||||
Sbjct 202028 TTCTTTTACTCTCTGCTCTGATGGTTTGTGAAGCAGGTGTTTGAGCATCAGGCAGGCAAA 202087
Query 13880 ATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCAT 13939
||||| || | ||||||||||| ||||||||||| || |||||||| | || |||||
Sbjct 202088 GTCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCAT 202147
Query 13940 CAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTC 13999
|| ||||||||| || | ||| |||||||| |||| ||
Sbjct 202148 CAGTCCTCGTTTCTTGAGCCA----------------------GAAAAGAAGATTCTGTC 202185
Query 14000 AACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTT 14059
| |||||||| |||| | ||||||||| | | || | ||||| | ||| | |
Sbjct 202186 CATAGCAGCAAAGGCTACAACACGTTCTCCATAGGTAGCCTCTTTGTCCCCAATCAAATG 202245
Query 14060 TCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATA 14119
|||||| | ||| || || | | || |||||||||| | ||||| || | | |
Sbjct 202246 CAAGGCCCATG--GCTTTCTTCTTCACACAAGGCATTGTTTCAGTGGCATTGAAGAGAAA 202303
Query 14120 TTCCTTCTCTTT--AGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAG 14177
|||| | ||||| ||| || ||| || || |||||||| | ||||||||||||||
Sbjct 202304 TTCCCTTTCTTTGAAGTCTTT--AATATAAGTGTCAATAAGAAGACTATACATTTCAGAA 202361
Query 14178 TGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGTACT 14237
|||||||||||||| || || || || ||||| || | | ||||| | ||| |||
Sbjct 202362 TGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACTGCGGGCTTCTGTAATTTGAACT 202421
Query 14238 TCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAAT 14297
|| | |||| || ||||||| || || ||||| | ||||| || ||| | ||
Sbjct 202422 TCTTGGCTAAATGGCTCCACCAAATTCTCCTTTACTATGCTATCACCTGCCGCAGAGAAA 202481
Query 14298 GCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTTTTCCAAT-CGGATAA 14356
|||| |||| | ||||| ||||| || ||| || || || ||| | | || |
Sbjct 202482 GCCAGAATGTGGAT-ATAAAATATTGTTCCTCAGGCTTCAGGGCTTCCCAGTGCTGA-AT 202539
Query 14357 ATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACAT 14416
||| | | |||| | || || ||| |||||||||| ||| ||||||| ||| ||||
Sbjct 202540 GTCCCT-GGAAGAGCCACCTCCTCAGCTGTCCAAAAGGAAGCCTCAGCTTTCTTACACAT 202598
>seq260
Length=2306558
Score = 176 bits (194), Expect = 4e-39
Identities = 319/459 (69%), Gaps = 17/459 (4%)
Strand=Plus/Plus
Query 13854 AGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGT 13913
|| ||||| || || | || ||| | ||| || | | ||||||||||| |||||||||
Sbjct 2180266 AGGTGTTTGAACATCAGGCAAGCAGAGTCATAAAGTAAACCCTCATCTCTGCTAATAAGT 2180325
Query 13914 TCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCA 13973
|| | |||| | || || ||||||||||| |||| || ||| | ||||||| ||
Sbjct 2180326 TCACTGGAAACT--TAGGCCAGGCATCAATCCCTGTTTCTTGAACTAGAATATTGATTCA 2180383
Query 13974 AATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAAC 14033
|| || | | ||||| |||| || || || |||| |||| | | ||||| |
Sbjct 2180384 AAAGAAACATAGAAGAAGTTTCCTTCCACAGCCACAAAGGCTACAACACATTCTCTGTAG 2180443
Query 14034 GATGCTTTTTTGTTCGATATCCATTTTCTAGCCC-ATTCAGAtttttttttAATAAAATC 14092
| |||| ||||| | ||||| | | || || | | | |||||| || | | ||
Sbjct 2180444 GTAGCTTCTTTGTCCCCAATCCAATG-CAAGACCTAATTTGCTTTTTTCTTTACATAAGG 2180502
Query 14093 CATTGTTTCAATAGCATTAAATAAATATTCCTTCTCTTTAGTACTTGAAATGTAT---GT 14149
|||||||||||| ||||| || | | ||||| | ||||| ||||| | | ||
Sbjct 2180503 CATTGTTTCAATGGCATTGAAGAGAAATTCCCTTTCTTT-------GAAATCTTTTAAGT 2180555
Query 14150 ATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATA 14209
|||||||| | |||||||||||| | |||| ||||| ||| || || || || ||||
Sbjct 2180556 GTCAATAAGGAGACTATACATTTCACAATGTA-GTTTTTCATGGCAATTTGGAAGTCATA 2180614
Query 14210 AAAGCATCTAGCTTCCGACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATT 14269
|| || | |||| | ||| |||||| | |||| || |||||||||||||
Sbjct 2180615 GAAACAGTGAACTTCTGTAATTTGAACTTCCTGGCTTAATCACTCCACCAAATTTTCATT 2180674
Query 14270 AACTATACCATCACTAGCTGCAAA-AAATGC-CAATATG 14306
||||| |||||||| |||||||| |||| | ||||||
Sbjct 2180675 TACTATGCCATCACTTGCTGCAAAGAAATTCATAATATG 2180713
>seq58
Length=10378366
Score = 149 bits (164), Expect = 6e-31
Identities = 542/832 (65%), Gaps = 56/832 (7%)
Strand=Plus/Plus
Query 13572 ACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGT 13631
|| || || || ||||| ||| ||||| || |||||||||||||| || |||||||||
Sbjct 1968513 ACTCCAATCTTCTGATACTCAACTACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGT 1968572
Query 13632 GATATATTTTCCATAAAATCAAATGGA-TTTATTGACATAAACACTTTATCACAACCTAG 13690
|| ||||| ||||||| |||| |||| ||| | | ||| || || | | || ||
Sbjct 1968573 GAAATATTCTCCATAATGTCAAGTGGATTTTCTACTCTGAAAATCTCGAT-AGAGCCCAG 1968631
Query 13691 TTCTAATAGTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCAT 13750
|| | | | || || || | ||| ||||| | || ||| ||| || |||||
Sbjct 1968632 TTTCAGCATAAGCCTGTCTGCTACAAATTCAATGCACTGCTTCATCAAAGAGCAGTTCAT 1968691
Query 13751 ACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTC 13810
|| || || || ||||| | ||||| | || || | |||||| | | |
Sbjct 1968692 CCCAATGAGCTTCACAGGCAAGGCCTTGGTGAGGAACTCCTGTTCTAT---CCTAACAAA 1968748
Query 13811 TTTTATAATAATTGTAATAATCTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAA 13870
|| ||||| | | | || ||| | | || | | | | ||| || ||| |
Sbjct 1968749 ATTGATAATTACTTTTATCCTCTTCTCCCA--CAGTGTGTAGCAAGTATTTGAACATTGA 1968806
Query 13871 ACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAA 13930
|| ||||||||| ||||||||| ||||||||||| || |||||||| |
Sbjct 1968807 GCAGGCAAAATCA-----------CTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAG 1968855
Query 13931 TCCTGGCATCAATCCTCGtttttttAACC--AAAATATTGCAGCAAATGACCCGGAAAAG 13988
|| ||||||| | || ||| || | | || |||||| ||||| || || ||||||
Sbjct 1968856 ACCAGGCATCAGCCGTCATTTCTTAAGTCAGAATATATTGATGCAAAAGAACCAGAAAAG 1968915
Query 13989 AATATTCCCTCAACTGCAGCAAACGCTA-TTAATCGTTCTCCA-AACGATGCTTTTTTGT 14046
|| ||| | || || |||||| |||| | || | |||||| || | |||||
Sbjct 1968916 AAGATTTCTTCCACATTAGCAAAGGCTACATCAT-GCTCTCCACAAATAGACTTTT---- 1968970
Query 14047 TCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAG 14106
||||| || || | || | ||| || || | | || ||| ||||| |
Sbjct 1968971 ----TATCCTGATT----CCAAATCTGTTTTCTTCTTCACACAAGGCATCATTTCAGTGC 1969022
Query 14107 CATTAAATAAATATTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTAT 14166
|||| || | | |||| || ||||| | | || | |||| ||||||| || || |
Sbjct 1969023 CATTGAAGATAAATTCTTTTTCTTTGGAATTT----TTAATGTGACAATAAGGAAACTGT 1969078
Query 14167 ACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCG 14226
| ||| |||| ||||| ||| | || || || || || ||||| || || ||||| |
Sbjct 1969079 ATATTACAGAATGTATTTTTCCTATGGCAATTTGGAATCCATAGAAACAGTGGGCTTCTG 1969138
Query 14227 ACCATTGTACTTC-CGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTA 14285
||| | ||| | |||| | ||| |||| ||||||| | ||| |||||||
Sbjct 1969139 TAATTTGAATTTCTTGGCTAAATTGCTTC-ACCAATTTTTCATGTATTATGCCATCAC-- 1969195
Query 14286 GCTGCAAAAAATGCC--AATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTTT 14343
|||| |||| ||| || |||| | ||||| | | ||| ||| || || ||
Sbjct 1969196 -CTGCTAAAA--GCCAGAACATGTGCT--ATAAAATCTCTCTCCTCAAGCTTCAGGGCTT 1969250
Query 14344 TCCAATCGGATAAA---TCCTTAGAAAGATCTACTTCATCAACTGTCCAAAA 14392
|||| || | || |||| | ||||||||||||| | ||||||||||||
Sbjct 1969251 CCCAA--GGTTGAATGTTCCTGA-AAAGATCTACTTCCTTAACTGTCCAAAA 1969299
>seq131
Length=5549739
Score = 140 bits (154), Expect = 3e-28
Identities = 238/344 (69%), Gaps = 1/344 (0%)
Strand=Plus/Minus
Query 13958 CCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTAT 14017
||| ||||||| |||| || || |||||||| ||||| || | | ||||| ||||
Sbjct 3233251 CCAGAATATTGACACAAAAGAACCAGAAAAGAAGATTCCTTCCGCAGTGGCAAAGGCTAA 3233192
Query 14018 TAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAttt 14077
| ||||| | | || | ||||||| ||||| | ||||| || | |||
Sbjct 3233191 AACATGTTCTTGTAGGTA-GCCTCTTTGTTCCCAATCCAACTCAAGGCCCAATCTGCTTT 3233133
Query 14078 ttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATATTCCTTCTCTTTAGTACT 14137
| || | | || ||| ||||||||||||| | | | ||||| | ||||||| |
Sbjct 3233132 CCTCTTCACACAAGGCATCCTTTCAATAGCATTGGAGAGAAATTCCCTTTCTTTAGAATC 3233073
Query 14138 TGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTAT 14197
| |||||| || |||||||| | || ||||||| ||| || |||||||| | || |
Sbjct 3233072 TTTAATGTAAGTGTCAATAAGGAGACTCTACATTTTAGAATGCATGTTTTCTGTGGCAAC 3233013
Query 14198 CTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTCCGAGTAAAATCTTTCGGC 14257
||| || ||||| || || | |||| | ||| ||||| | |||| ||| |
Sbjct 3233012 CTGGAAGCCATAGAAACAGCCCACTTCTGTAATTTGAACTTCTTGGCTAAATTATTCCAC 3232953
Query 14258 CAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCA 14301
|||||||||||| |||| |||||||| |||||||| || ||||
Sbjct 3232952 CAAATTTTCATTTGCTATGCCATCACTTGCTGCAAAGAAAGCCA 3232909
>seq64
Length=9676502
Score = 138 bits (152), Expect = 1e-27
Identities = 112/136 (82%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 13894 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13953
|||||||||| ||||||||||| || |||||||| | || ||||||| ||||||||| |
Sbjct 6351547 CCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 6351488
Query 13954 ttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14013
| | ||| ||||||| |||||| || || |||||||| |||||||| || |||||||| |
Sbjct 6351487 TGAGCCAGAATATTGAAGCAAAAGAACCAGAAAAGAAGATTCCCTCCACAGCAGCAAAGG 6351428
Query 14014 CTATTAATCGTTCTCC 14029
||| | ||||||||
Sbjct 6351427 CTACAACACGTTCTCC 6351412
>seq59
Length=10161055
Score = 127 bits (140), Expect = 2e-24
Identities = 365/557 (66%), Gaps = 11/557 (2%)
Strand=Plus/Minus
Query 13875 GCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCT 13934
||||| ||| | || | ||||| ||||| || |||||||| || |||||||| | ||
Sbjct 9902968 GCAAATTCAGAGTGTAAACCCTCGTCTCTGCTGATAAGTTCATTGGAAAATGTGAGGCCA 9902909
Query 13935 GGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATT 13994
||||||| | || | | | ||||||||||| |||||||| || |||||||| |||
Sbjct 9902908 GGCATCAGTTCT-----TATGAGCCAAAATATTGATGCAAATGAGCCAGAAAAGAAGATT 9902854
Query 13995 CCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATC 14054
| | | || || ||| | |||| || | | |||| ||||| | ||
Sbjct 9902853 TCTCCCGTAGTGGCCAAGACTACAACACGTTTTCTGTAGGTAGCTTCTTTGTCCCCAGTC 9902794
Query 14055 CATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAAT 14114
|| || || || | ||| || || | || ||| ||||||| ||| | |
Sbjct 9902793 CAACACAAGGCACAGTCTGCTTTCTTCTTCACCCAAGGCATCATTTCAATGGCACTGGAG 9902734
Query 14115 AAATATTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCA 14174
| | ||||| | |||| | | || |||||| | |||||||| | | ||| ||||||
Sbjct 9902733 AGAAATTCCCTGTCTTAGGAATTTTTAATGTAAATGTCAATAAGGAGACCATATATTTCA 9902674
Query 14175 GAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGT 14234
|| ||||||||||||||||| | || || ||| | || || | ||||| |||
Sbjct 9902673 GAATGTATGTTTTCCATAGCAACTTGGAAGCCACAGAAACAGCCGGCTTCTATAATTTGA 9902614
Query 14235 ACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAA 14294
|| || | ||||| | ||| ||||||| | |||| ||||||| ||| ||||
Sbjct 9902613 ACCTCTTGGCTAAATCGCTGCACCAGATTTTCACTTGCTATGCCATCACGTGCTTCAAAG 9902554
Query 14295 AATGC--CAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTTTTCCAAT-CG 14351
|| || || |||| | ||||| ||| || ||| || || | || | |
Sbjct 9902553 AAAGCTAGAACATGTGAT--ATAAAATATCATTCCTCAGGCTTCAGGGCCTGCCGGTGCT 9902496
Query 14352 GATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTA 14411
|| ||||| |||||||| || || || ||||||| || || | ||||| |||
Sbjct 9902495 GA-CTGTCCTTGGAAAGATCCACCTCCTCCGCTGTCCAGAAGGACGCCTCGGCTTTCTTA 9902437
Query 14412 TACATTACCCATATTTC 14428
|||||| ||| || ||
Sbjct 9902436 TACATTTGCCAAATATC 9902420
>seq299
Length=1791600
Score = 120 bits (132), Expect = 3e-22
Identities = 286/425 (67%), Gaps = 12/425 (3%)
Strand=Plus/Minus
Query 13584 TGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCC 13643
||||| || |||| |||| |||||||| || ||||| ||||| | || || ||||||
Sbjct 1083428 TGATACTCTGAAACTTTTTTCTCAAAGAAATTTGTTTTCCCTTCTAAAGAAATGTTTTCC 1083369
Query 13644 ATAAAATCAAATGGATTTATTGACATAAACACTTTATCACAA-CCTAGTTCTAATAGTAA 13702
||||||||||| |||||| || | ||| || || | | || || ||||| | |||||
Sbjct 1083368 ATAAAATCAAAGGGATTTTCTGCCTGAAAAACCTT-TGAGAATCCAAGTTCCATAAGTAA 1083310
Query 13703 TCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTT 13762
||| ||||| ||||| |||||||| || ||| ||| |||| ||||| | || ||
Sbjct 1083309 TCTTTCAGCTATAAATTCAATATACTGGCTCATCAAAACACAGTTCATCCTAATGAGGCC 1083250
Query 13763 TACAGG-AATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATAATAA 13821
|| || || | | | |||||||| || | || || |||| | || | ||| |
Sbjct 1083249 AACTGGCAAGTCT-TCTGTTAAAAACTCCTGCTCAATTTTGACAG---CATTAACAATGA 1083194
Query 13822 TTGTAATAA----TCTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCA 13877
| | | | || | |||| || | || | | ||| | || || |||
Sbjct 1083193 TCTCCCTCACCCTTTTCTTCTGAAGTCTTATTTACTAAGTACTGAAACACTAGGCAAGCA 1083134
Query 13878 AAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGC 13937
|| ||| | |||| | |||||||| | || || || || |||||||| | ||| ||
Sbjct 1083133 AAGTCATAGAGAAGTTCTTCATCTCTGTTGATCAGCTCATTGGAAAATGTGAGTCCAGGG 1083074
Query 13938 ATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCC 13997
|| |||| || |||||||| || || | |||||| || || | ||||| |||||
Sbjct 1083073 ATGGGACCTCTCTTCTTTAACCAGAAAATAGTAGCAAA-GATCCTCAGAAGAAAATTCCT 1083015
Query 13998 TCAAC 14002
|| ||
Sbjct 1083014 TCCAC 1083010
Score = 86.0 bits (94), Expect = 6e-12
Identities = 150/217 (69%), Gaps = 1/217 (0%)
Strand=Plus/Minus
Query 13908 ATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATT 13967
||||| || || |||||||| | ||| || || |||| || |||||||| || ||
Sbjct 1082836 ATAAGCTCATTGGAAAATGTAAGTCCAGGGATGGGACCTCTCTTCTTTAACCAGAAAATA 1082777
Query 13968 GCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCT 14027
|||||||| || || || ||||| ||||| || || | | | || | | || |||
Sbjct 1082776 GCAGCAAAAGATCCTGAGAAGAAAATTCCTTCCACAGAACTGATGGCCACCACTCTTTCC 1082717
Query 14028 CCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAttttttt-ttAAT 14086
||||| | | ||| | | ||||||| ||||| || | ||||||| ||||
Sbjct 1082716 CCAAAAGTAGACTTTCTATCTACTATCCATCACAGGGCCCAGTCTGCTTTTTTTCTTAAC 1082657
Query 14087 AAAATCCATTGTTTCAATAGCATTAAATAAATATTCC 14123
| |||||||| ||| |||||||||||| |||||
Sbjct 1082656 GTATGGCATTGTTTTAATTGCATTAAATAAAAATTCC 1082620
>seq11673
Length=1157
Score = 104 bits (114), Expect = 2e-17
Identities = 108/139 (78%), Gaps = 2/139 (1%)
Strand=Plus/Plus
Query 13524 TAAAAATCAACATCTAATGAAAAAACATTATCGTCTTTG-TTAGAAATAACGCCCATTTT 13582
||||| ||| |||| || | |||| |||||| | | | || || || || ||||| |
Sbjct 222 TAAAAGTCAGCATCCAAGGTAAAAGAATTATC-TGTCGGATTTGACATCACTCCCATCCT 280
Query 13583 TTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTC 13642
||||| || | ||||| || |||||||||||||| || ||||| ||||| ||||| ||
Sbjct 281 CTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCTAGTGAAATATTCTC 340
Query 13643 CATAAAATCAAATGGATTT 13661
|||||| ||||||||||||
Sbjct 341 CATAAAGTCAAATGGATTT 359
>seq3
Length=41493964
Score = 95.1 bits (104), Expect = 1e-14
Identities = 149/212 (70%), Gaps = 1/212 (0%)
Strand=Plus/Plus
Query 11314 AACATTT-AACTTCTTTAATTTTTGGATATTCTACTTTTTCAAAAATAATTTGAGCCACC 11372
|||| || |||||||| || | |||||| | |||| |||| | || || |
Sbjct 8287227 AACACTTGAACTTCTTCTATATCTGGATAAAAAATCCGTTCACAAATGAGCTGTGCTATT 8287286
Query 11373 CGATCGCCTCTTTTAATATTAAATGTATTTTTACCATTATTAATAAATATAACTCCAATG 11432
||||| ||| |||| | | ||| | | ||||||| ||||| || | ||| |||||
Sbjct 8287287 CGATCACCTTTTTTTACTTCAAACTTCTCTTTACCAAAATTAAACAACACAACACCAATA 8287346
Query 11433 TTACCCCTATAATCTTCATCTATAACTCCTCCTCCTATATCTATGCCATAATATAACGAA 11492
|| || ||||||||||||||||| || || |||||| ||||||| || | | |
Sbjct 8287347 TTTCCTCTATAATCTTCATCTATGACACCAGCTCCTACATCTATGAAGTATTTTGCAGCC 8287406
Query 11493 AGACCAGACCTTGGCGCTATTCGTCCATAACA 11524
|| ||||| | ||| ||||||| |||||| ||
Sbjct 8287407 AGGCCAGAACGTGGAGCTATTCTTCCATAGCA 8287438
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479653144442200
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