Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ictidomys_20tridecemlineatus_20[refseq_20GCF_5F000236235.1_202011-
11-29] 12,483 sequences; 2,478,393,770 total letters
Query= NC_005336.1
Length=139962
Score E
Sequences producing significant alignments: (Bits) Value
seq89 107 2e-18
>seq89
Length=7633750
Score = 107 bits (118), Expect = 2e-18
Identities = 115/152 (76%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 128874 GGCTACCTCGGGTGCCAGGCACTCTCTGAGATGATACAGTTTTACTTGGAAGAGGTGATG 128933
|| ||||| || ||||| || | || |||||||| ||||||||| | | |||||||||
Sbjct 5836150 GGTTACCTGGGTTGCCAAGCCTTGTCGGAGATGATCCAGTTTTACCTAGTGGAGGTGATG 5836209
Query 128934 CCGCAGGCGGAAAATCACGGGCCGGACATCAAAGAGCACGTTAACTCGCTGGGAGAAAAG 128993
|| ||||| || || ||| | || || |||| |||||||| ||||| ||||| || |||
Sbjct 5836210 CCCCAGGCAGAGAACCACAGCCCAGATGTCAAGGAGCACGTGAACTCCCTGGGGGAGAAG 5836269
Query 128994 CTCAAAACGCTGCGTCTTCGACTGCGTCGCTG 129025
|| || || || | || || || || |||||
Sbjct 5836270 CTGAAGACCCTCAGACTGCGGCTCCGGCGCTG 5836301
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 447680534146960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |