Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ictidomys_20tridecemlineatus_20[refseq_20GCF_5F000236235.1_202011- 11-29] 12,483 sequences; 2,478,393,770 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq536 297 2e-75 seq59 188 9e-43 seq131 187 3e-42 seq260 181 1e-40 seq58 167 3e-36 seq64 123 3e-23 seq30 122 1e-22 seq3 120 4e-22 seq2 107 2e-18 seq11673 86.0 8e-12 >seq536 Length=337149 Score = 297 bits (328), Expect = 2e-75 Identities = 617/914 (68%), Gaps = 40/914 (4%) Strand=Plus/Plus Query 32951 TGTTTCTTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAACTC 33007 |||| ||||||||||| |||| || | |||| ||||||| | || ||||| |||| Sbjct 201724 TGTTCATTTAAAAGTCAGCATCCAAGGTAAAAGAATTATCTGTTGGATTCGACATCACTC 201783 Query 33008 CCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATA 33067 ||||||| || || || || || | || || || || |||||||| ||||| | ||| | Sbjct 201784 CCATTTTCTGATACTCGCCTACTCCCTTCTCAAAGAAGTTAGTTTTCCCTTCTAGTGAAA 201843 Query 33068 TATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAA-TTCA 33126 |||| ||||| || | ||| ||||| || || |||| || ||||| |||| |||| Sbjct 201844 TATTCTCCATAAAGTTAAATGGATTTTCTACTTTGAAAATCTTGTTAAAGCCCAGCTTCA 201903 Query 33127 GAAATCAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCT 33186 | | | | ||||| || || ||||| || || ||||||| |||||||| || Sbjct 201904 GCA-TAAGCCTATCTGCCACAAATTCAATGTACTGCTTCATCAAAGTGCAATTCATCCCA 201962 Query 33187 ATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTT 33246 || || || | || | || | || || || || || || || | |||| | Sbjct 201963 ATTAGCTTCTCAGGCAAGGCTTCTGTGAGGAACTCCTGATCTATCTTGAAGGCAT---TG 202019 Query 33247 ATAATAGAT-CTAACGGTTTCTTCACTC--GGTGGATGCAATAAATGTTTAAACATCAAA 33303 ||||| | | || | ||| | || ||| || | | ||||| | ||||| Sbjct 202020 ATAATTGTTTCTTTTACTCTCTGCTCTGATGGTTTGTGAAGCAGGTGTTTGAGCATCAGG 202079 Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363 || || || || ||||| | |||||| ||||| ||||| ||||| |||||||| ||||| Sbjct 202080 CAGGCAAAGTCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGG 202139 Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423 || ||||| || || || || || ||||| ||||||||| Sbjct 202140 CCAGGCATCAGTCCTCGTTTCTTGAGCCA----------------------GAAAAGAAG 202177 Query 33424 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGT 33480 |||| || | ||||||||||| | || | |||||||| | | | |||| Sbjct 202178 ATTCTGTCCATAGCAGCAAAGGCTACAACACGTTCTCCATAGGTAGCCTCTTTGTCCCCA 202237 Query 33481 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33540 ||| | | ||||| ||| ||||| || ||||||||||| ||||| ||||||| Sbjct 202238 ATCAAATGCAAGGCCCAT--GGCTTTCTTCTTCACACAAGGCATTGTTTCAGTGGCATTG 202295 Query 33541 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 33600 |||||| | | |||| || ||||||| |||||| || || | ||||||||||||| Sbjct 202296 AAGAGAAATTCCCTTTCTTTGAAGTCTTTAATATAAGTGTCAATAAGAAGACTATACATT 202355 Query 33601 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 33660 || ||||| |||||||| ||||| || || || || ||||||| | || || ||||| Sbjct 202356 TCAGAATGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACTGCGGGCTTCTGTAATT 202415 Query 33661 TGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCA 33720 || |||||| | |||| | ||| ||||||| || || ||||| | |||| || ||| Sbjct 202416 TGAACTTCTTGGCTAAATGGCTCCACCAAATTCTCCTTTACTATGCTATCACCTGCCGCA 202475 Query 33721 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCA 33780 | || |||| | || ||||||||||| ||| || || | || | ||| | Sbjct 202476 GAGAAAGCCAGAATGTG-GATATAAAATATTGTTCCTCAGGCTTCAGGGCTTCCCAGTGC 202534 Query 33781 TTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTA 33840 | || || | || | | | || || || |||||||||| || ||||| || || ||| Sbjct 202535 TGAATGTCCCTGGA-AGAGCCACCTCCTCAGCTGTCCAAAAGGAAGCCTCAGCTTTCTTA 202593 Query 33841 TACATGTTCCAGAT 33854 |||| | || ||| Sbjct 202594 CACATCTGCCGGAT 202607 >seq59 Length=10161055 Score = 188 bits (208), Expect = 9e-43 Identities = 372/548 (68%), Gaps = 12/548 (2%) Strand=Plus/Minus Query 33317 AGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGC 33376 |||| | |||||||||||| || || ||||| |||||||| ||||| || ||||| || Sbjct 9902958 AGTGTAAACCCTCGTCTCTGCTGATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTT 9902899 Query 33377 CACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTC--TAC 33434 | || | ||||||||||| || || ||||| ||||||||||||||| || | || Sbjct 9902898 C-----TTATGAGCCAAAATATTGATGCAAATGAGCCAGAAAAGAAGATTTCTCCCGTAG 9902844 Query 33435 TGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTATCCACTTTTG 33491 || || ||| | | || | | || || | | | |||| |||| Sbjct 9902843 TG--GCCAAGACTACAACACGTTTTCTGTAGGTAGCTTCTTTGTCCCCAGTCCAACACAA 9902786 Query 33492 AGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtt 33551 || || || || ||||| || || ||||||||| |||| |||||| | ||||| | | Sbjct 9902785 GGCACAGTCTGCTTTCTTCTTCACCCAAGGCATCATTTCAATGGCACTGGAGAGAAATTC 9902726 Query 33552 tttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAAT 33611 | || | || ||||| ||| | || || | |||| ||| ||||| ||||| || Sbjct 9902725 CCTGTCTTAGGAATTTTTAATGTAAATGTCAATAAGGAGACCATATATTTCAGAATGTAT 9902666 Query 33612 GTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGT 33671 |||||| || || | || || || ||||||| | || || |||| || || ||| Sbjct 9902665 GTTTTCCATAGCAACTTGGAAGCCACAGAAACAGCCGGCTTCTATAATTTGAACCTCTTG 9902606 Query 33672 ACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAA 33731 | |||||| | | ||| ||||||| | |||| || |||| ||| |||| || || | Sbjct 9902605 GCTAAATCGCTGCACCAGATTTTCACTTGCTATGCCATCACGTGCTTCAAAGAAAGCTAG 9902546 Query 33732 TACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTT 33791 |||||| |||||||||| ||| || || | || | || | | | || || Sbjct 9902545 AACATGTGATATAAAATATCATTCCTCAGGCTTCAGGGCCTGCCGGTGCTGACTGTCCTT 9902486 Query 33792 AGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTCCA 33851 || | ||| || || ||| ||||||| || || ||||| || || |||||||| | ||| Sbjct 9902485 GGAAAGATCCACCTCCTCCGCTGTCCAGAAGGACGCCTCGGCTTTCTTATACATTTGCCA 9902426 Query 33852 GATGTCAT 33859 || |||| Sbjct 9902425 AATATCAT 9902418 >seq131 Length=5549739 Score = 187 bits (206), Expect = 3e-42 Identities = 268/376 (71%), Gaps = 4/376 (1%) Strand=Plus/Minus Query 33389 GCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAA 33448 |||| ||||| || | || || |||||||||||||||||||| | | |||||||| | Sbjct 3233252 GCCAGAATATTGACACAAAAGAACCAGAAAAGAAGATTCCTTCCGCAGTGGCAAAGGCTA 3233193 Query 33449 TAA---GTCTCTCTCCATAACCGGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCT 33505 || || | | || || | ||| ||||| | |||||||| || | Sbjct 3233192 AAACATGTTCTTGTAGGTAGCCT-CTTTGTTCCCAATCCAACTCAAGGCCCAATCTGCTT 3233134 Query 33506 TCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTAT 33565 || | || |||||||||||| |||| || ||||| ||||| | | |||| ||| || Sbjct 3233133 TCCTCTTCACACAAGGCATCCTTTCAATAGCATTGGAGAGAAATTCCCTTTCTTTAGAAT 3233074 Query 33566 CTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCA 33625 |||||| ||||| || || | ||||| ||||||| ||||| |||||||| |||| | Sbjct 3233073 CTTTAATGTAAGTGTCAATAAGGAGACTCTACATTTTAGAATGCATGTTTTCTGTGGCAA 3233014 Query 33626 TCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCCG 33685 ||| || || |||||||| | | || ||||| || |||||| | |||| |||| Sbjct 3233013 CCTGGAAGCCATAGAAACAGCCCACTTCTGTAATTTGAACTTCTTGGCTAAATTATTCCA 3232954 Query 33686 CCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAA 33745 ||||||||||||| |||| || ||||| |||||||| || |||| ||| | ||||| Sbjct 3232953 CCAAATTTTCATTTGCTATGCCATCACTTGCTGCAAAGAAAGCCAGGACAAGCAATATAA 3232894 Query 33746 AATATTTTTCGTCTGG 33761 ||||| ||| || || Sbjct 3232893 AATATCGTTCCTCAGG 3232878 >seq260 Length=2306558 Score = 181 bits (200), Expect = 1e-40 Identities = 617/947 (65%), Gaps = 22/947 (2%) Strand=Plus/Plus Query 32948 TTATGTTTCTTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAA 33004 || |||| |||| |||||| |||| || | ||||| ||| || | || ||||| Sbjct 2179926 TTCTGTTCATTTAGAAGTCAGCATCCAAGGTAAAATAATTCCCTGTTGGATTTGACATCT 2179985 Query 33005 CTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATG 33064 |||||| | || || ||||| || || || || || ||| | || |||||| | Sbjct 2179986 CTCCCACCCTCTGATACTCACCTACTTTCTTCTCAAAGAAGTTAATCTTGTCTTCCATTA 2180045 Query 33065 ATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAA-T 33123 | ||||| ||||| || ||||| | ||| || | ||| || |||| |||| | Sbjct 2180046 A-ATATTCTCCATAAAGTCAAATGAATTTTCTACTCTGAAAACCTTGCTAAAGCCCAGCT 2180104 Query 33124 TCAGAAATCAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATT 33183 ||| | | || || | || |||||||| ||||| ||||||| || || || Sbjct 2180105 TCATCA-TAAACCTGTGTGCCACGAATTCAATATACTGCTTCATCAAAGTGCAGTTTATC 2180163 Query 33184 CCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCT 33243 || | | || || || | |||| | | | || || ||||| | | || |||| | Sbjct 2180164 CCAGTGAACTTCACAGGCAAAGCCTCCATGATGAACTCCTGTTCTAAGCTGACAGCAT-T 2180222 Query 33244 GTTATAATAGATCTA--ACGGTTT-CTTCACTCGGTGGATGCAATAAATGTTTAAACATC 33300 | || |||| ||| || | | || || | | | | || | | ||||| |||||| Sbjct 2180223 GATA-AATATTTCTTTTACTCTCTGCTCCAATGGTTTG-TGTAGCAGGTGTTTGAACATC 2180280 Query 33301 AAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTG 33360 | || || | || | | | |||||| ||||| ||||| ||||| |||||| | Sbjct 2180281 AGGCAAGCAGAGTCATAAAGTAAACCCTCATCTCTGCTAATAAGTTCACTGGAAAC--TT 2180338 Query 33361 AGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAG 33420 || || ||||| | || | || || | | | ||||| || | || || || | ||| Sbjct 2180339 AGGCCAGGCATCAATCCCTGTTTCTTGAACTAGAATATTGATTCAAAAGAAACATAGAAG 2180398 Query 33421 AAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCA 33477 ||| ||||||| || || ||||||| | || | |||| || | | | |||| Sbjct 2180399 AAGTTTCCTTCCACAGCCACAAAGGCTACAACACATTCTCTGTAGGTAGCTTCTTTGTCC 2180458 Query 33478 TGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCA 33537 ||||| | || ||| || || || |||||| ||||||| ||||| |||||| Sbjct 2180459 CCAATCCAATGCAAGACCTAATTTGCTTTTTTCTTTACATAAGGCATTGTTTCAATGGCA 2180518 Query 33538 TTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATAC 33597 || |||||| | | |||| || |||||| ||||| || || | ||||||||| Sbjct 2180519 TTGAAGAGAAATTCCCTTTCTTTGAAATCTTT----TAAGTGTCAATAAGGAGACTATAC 2180574 Query 33598 ATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTA 33657 ||||| |||| | |||||| |||| || || || | |||||||| | | || ||| Sbjct 2180575 ATTTCACAATGTAGTTTTTCA-TGGCAATTTGGAAGTCATAGAAACAGTGAACTTCTGTA 2180633 Query 33658 ATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCT 33717 || || ||||| | |||| ||| ||||||||||||| ||||| || ||||| ||| Sbjct 2180634 ATTTGAACTTCCTGGCTTAATCACTCCACCAAATTTTCATTTACTATGCCATCACTTGCT 2180693 Query 33718 GCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAA 33777 ||||| || || | ||| ||||||||| ||| || | | | || | | | Sbjct 2180694 GCAAAGAAATTCATAATATGAGACATAAAATATCATTCCTCAGATTTCAGGGCTTCCTAG 2180753 Query 33778 TCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 33837 | || || || || ||| | || || | |||| |||| || | || ||||| Sbjct 2180754 TGCAGAATGTCCTTGGAAATAGCCACCTCCCCATATGTCAAAAAGGAACCTTCAGCCTTC 2180813 Query 33838 TTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAA 33884 ||| | || | ||| || |||| ||| ||| || || | ||||| Sbjct 2180814 TTAGAAATCTGCCAAATATCATGGTATCTGATAGGAAAGAAGACAAA 2180860 >seq58 Length=10378366 Score = 167 bits (184), Expect = 3e-36 Identities = 542/829 (65%), Gaps = 41/829 (5%) Strand=Plus/Plus Query 33004 ACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAAT 33063 ||||| || || || || ||| | || | || || || || ||||| || ||||||| | Sbjct 1968513 ACTCCAATCTTCTGATACTCAACTACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGT 1968572 Query 33064 GATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAAT 33123 || ||||| ||||| | |||| ||||| || | |||| | || | |||| | Sbjct 1968573 GAAATATTCTCCATAATGTCAAGTGGATTTTCTACTCTGAAAATCTCGATAGAGCCCAGT 1968632 Query 33124 T-CAGAAATCAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCAT 33182 | ||| | | | || || || || ||||| || | ||||||| || ||||| Sbjct 1968633 TTCAGCA-TAAGCCTGTCTGCTACAAATTCAATGCACTGCTTCATCAAAGAGCAGTTCAT 1968691 Query 33183 TCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATC 33242 || || || || || || | ||| || || || || ||||| || || || Sbjct 1968692 CCCAATGAGCTTCACAGGCAAGGCCTTGGTGAGGAACTCCTGTTCTATCCTAACAAAAT- 1968750 Query 33243 TGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAA 33302 || || | || | || | |||| | | | ||| || | || | ||| ||||| | Sbjct 1968751 TGATA-ATTACTTTTATCCTCTTCTCC-CACAGTG--TGTAGCAAGTATTTGAACATTGA 1968806 Query 33303 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAG 33362 || || ||||| | || ||||| ||||| ||||| |||||||| ||||| Sbjct 1968807 GCAGGCAAAATCAC-----------TCATCTCTGCTAATAAGTTCATTGGAAAATGTGAG 1968855 Query 33363 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATG--GAAGCGAATGATCCAGAAAAG 33420 || ||||| || | | || ||||| || ||||| || || || || ||||||||| Sbjct 1968856 ACCAGGCATCAGCCGTCATTTCTTAAGTCAGAATATATTGATGCAAAAGAACCAGAAAAG 1968915 Query 33421 AAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGT 33480 |||||| |||| || ||||||||| | | ||||||| || | | | | Sbjct 1968916 AAGATTTCTTCCACATTAGCAAAGGCTACATCATGCTCTCCACAAATAGACTTTT----T 1968971 Query 33481 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33540 |||| || || |||| | ||||| || |||||||||||| |||| || |||| Sbjct 1968972 ATCCTGATT----CCAAATCTGTTTTCTTCTTCACACAAGGCATCATTTCAGTGCCATTG 1969027 Query 33541 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 33600 |||| | | | |||||| || || |||| | || | || | | ||| || ||| Sbjct 1969028 AAGATAAATTCTTTTTCTTTGGAATTTTTA----ATGTGACAATAAGGAAACTGTATATT 1969083 Query 33601 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 33660 | ||||| || ||| | ||||| || || ||||| |||||||| || || ||||| Sbjct 1969084 ACAGAATGTATTTTTCCTATGGCAATTTGGAATCCATAGAAACAGTGGGCTTCTGTAATT 1969143 Query 33661 TGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCA 33720 || | |||| | |||| | | | |||| ||||||| | ||| || |||| |||| Sbjct 1969144 TGAATTTCTTGGCTAAATTGCTTCACCAATTTTTCATGTATTATGCCATCAC---CTGCT 1969200 Query 33721 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCA 33780 |||| |||| |||||| |||||||| | | || || | | || |||| | Sbjct 1969201 AAAA--GCCAGAACATGTGCTATAAAATCTCTCTCCTCAAGCTTCAG-GGCTTCCCAAGG 1969257 Query 33781 TTGATATCTT--TAGATATATCTACTTCTTCCACTGTCCAAAATGATGC 33827 |||| || || | | | ||||||||| | ||||||||||| || || Sbjct 1969258 TTGA-ATGTTCCTGAAAAGATCTACTTCCTTAACTGTCCAAAAGGAAGC 1969305 >seq64 Length=9676502 Score = 123 bits (136), Expect = 3e-23 Identities = 100/121 (83%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 33326 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33385 |||| ||||| ||||| ||||| |||||||| ||||| || ||||| || || || || | Sbjct 6351547 CCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 6351488 Query 33386 TAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33445 | ||||| ||||| ||||| || || ||||||||||||||||| || || |||||||||| Sbjct 6351487 TGAGCCAGAATATTGAAGCAAAAGAACCAGAAAAGAAGATTCCCTCCACAGCAGCAAAGG 6351428 Query 33446 C 33446 | Sbjct 6351427 C 6351427 Score = 91.5 bits (100), Expect = 2e-13 Identities = 94/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 33565 TCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCC 33624 ||||||| ||||| || || | |||||||||||||| ||||| |||||||| ||||| Sbjct 6349677 TCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGCA 6349618 Query 33625 ATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCC 33684 || || || || |||||||| | || || |||| || |||||| | |||||| ||| Sbjct 6349617 ATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAACTTGAACTTCTTGGCTAAATCGCTCC 6349558 Query 33685 GCC 33687 || Sbjct 6349557 ACC 6349555 >seq30 Length=14751797 Score = 122 bits (134), Expect = 1e-22 Identities = 109/137 (80%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 62337 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62396 || ||||||||||| ||||| ||||| ||||| || ||||| ||||| || ||||| | Sbjct 820281 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTATAGATATTGCTGGTGTAAGGTTCAATG 820340 Query 62397 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62456 ||||||||||| |||| || ||||||||||| ||||| ||||| || || | | |||| Sbjct 820341 GACTCATTATTCCCCAGGATCTGAGCAGTTGAAGCAGTAGGCATCGGGGCAATAAGTAAA 820400 Query 62457 CTATTTCTAAGACCGTA 62473 || ||||| | ||| || Sbjct 820401 CTGTTTCTTACACCATA 820417 Score = 118 bits (130), Expect = 1e-21 Identities = 118/153 (77%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 63212 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCT 63271 || ||| |||||||| |||||||| |||||||||||||| | || ||||| |||| || Sbjct 832087 CTCCACCCGTTTCATGAAGAGATCTGGAATCCAAAGAGCAAAGAAAAGATCCCTGGCTCG 832146 Query 63272 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 63331 || ||||| |||||||| ||||| || | ||| |||||| | | || || ||||||| Sbjct 832147 CTGCTCCTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAACTCAAAGATGTCTAAATGCCA 832206 Query 63332 CGGTTCCAAGTATATGGCCATAACTCCAGGCCG 63364 ||||||| ||| || || | ||||||| || Sbjct 832207 AGGTTCCAGGTAAATAGCAAATGCTCCAGGACG 832239 >seq3 Length=41493964 Score = 120 bits (132), Expect = 4e-22 Identities = 151/207 (73%), Gaps = 3/207 (1%) Strand=Plus/Plus Query 31095 TTGTACTTCTTCCAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATC 31154 ||| |||||||| | ||||||||| | || |||| | | || ||||| ||||||| ||| Sbjct 8287232 TTGAACTTCTTCTATATCTGGATAAAAAATCCGTTCACAAATGAGCTGTGCTATTCGATC 8287291 Query 31155 TCCAGTATTTACATTAAACGTACATTTTCCATTATTAATAAGAATGACTCCTATGTTTCC 31214 || | ||||| | |||| | ||| ||| ||||| | | || || || ||||| Sbjct 8287292 ACCTTTTTTTACTTCAAACTTCTCTTTACCAAAATTAAACAACACAACACCAATATTTCC 8287351 Query 31215 CCTATAATCTTCGTCTATTACACCGCCTCCTATATCAAT---GCCTTTTAGGGACAGACC 31271 ||||||||||| ||||| ||||| |||||| ||| || | |||| | ||| || Sbjct 8287352 TCTATAATCTTCATCTATGACACCAGCTCCTACATCTATGAAGTATTTTGCAGCCAGGCC 8287411 Query 31272 AGACCTAGGAGCTATTCTACCATAGCA 31298 ||| | ||||||||||| |||||||| Sbjct 8287412 AGAACGTGGAGCTATTCTTCCATAGCA 8287438 >seq2 Length=46620681 Score = 107 bits (118), Expect = 2e-18 Identities = 95/119 (80%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 33328 TCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 33387 || ||||| || || ||||| |||||||| ||||| || ||||| || || | ||| || Sbjct 41377775 TCATCTCTGCTGATCAGTTCATTGGAAAATGTGAGCCCAGGCATGAGACCTCTCTTCTTT 41377716 Query 33388 AGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGC 33446 ||||| ||||| | ||| || ||||| || ||||| |||||||| || ||||||||||| Sbjct 41377715 AGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCCTTCCACAGCAGCAAAGGC 41377657 >seq11673 Length=1157 Score = 86.0 bits (94), Expect = 8e-12 Identities = 109/148 (74%), Gaps = 3/148 (2%) Strand=Plus/Plus Query 32948 TTATGTTTCTTTAAAAGTCAACATCTAAAGAAAAATGATTATCT-TC--TTGAGACATAA 33004 || |||| ||||||||||| |||| || | |||| ||||||| || | ||||| | Sbjct 211 TTCTGTTCATTTAAAAGTCAGCATCCAAGGTAAAAGAATTATCTGTCGGATTTGACATCA 270 Query 33005 CTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATG 33064 ||||||| | || || || || || | || || || || ||||| || ||||| | || Sbjct 271 CTCCCATCCTCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCTAGTG 330 Query 33065 ATATATTTTCCATGAAATCAAACGGATT 33092 | ||||| ||||| || ||||| ||||| Sbjct 331 AAATATTCTCCATAAAGTCAAATGGATT 358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622849996876280