Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ictidomys_20tridecemlineatus_20[refseq_20GCF_5F000236235.1_202011-
11-29] 12,483 sequences; 2,478,393,770 total letters
Query= NC_007767.1
Length=132959
Score E
Sequences producing significant alignments: (Bits) Value
seq14 89.7 4e-13
>seq14
Length=21378024
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||| || ||||| || || || ||||| || ||||| ||| |||| ||| ||||
Sbjct 6329731 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTTGAGCCCAGT 6329790
Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405
||||| | | | || ||| |||||| || || || ||| |||| |||||||
Sbjct 6329791 GACACCATCGAGAATGTCAAAGCCAAAATTCAAGACAAGGAGGGCATCCCACCTGATCAG 6329850
Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465
|| | || || | |||||||||||| | || |||| | || | | ||||| |||
Sbjct 6329851 CAGCGTCTGATATTTGCGGGCAAACAGCTGGAGGATGGCCGCACTCTCTCAGATTACAAC 6329910
Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
|| || |||||||| || | || ||||| | | ||||||| ||
Sbjct 6329911 ATCCAGAAAGAGTCCACCCTGCACTTGGTGCTTCGCCTGCGAGGTGG 6329957
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425279289625960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |