Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ictidomys_20tridecemlineatus_20[refseq_20GCF_5F000236235.1_202011-
11-29] 12,483 sequences; 2,478,393,770 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq536 291 1e-73
seq59 179 5e-40
seq260 172 7e-38
seq131 168 8e-37
seq58 141 1e-28
seq30 122 1e-22
seq64 111 2e-19
seq3 111 2e-19
seq2 102 1e-16
seq299 98.7 1e-15
>seq536
Length=337149
Score = 291 bits (322), Expect = 1e-73
Identities = 633/944 (67%), Gaps = 40/944 (4%)
Strand=Plus/Plus
Query 32308 TGTTTCTTTAAAAGTCAACATCTAGAGAAAAATGATTGTCTTCTTGA---GACATAACTC 32364
|||| ||||||||||| |||| | | |||| ||| ||| | || ||||| ||||
Sbjct 201724 TGTTCATTTAAAAGTCAGCATCCAAGGTAAAAGAATTATCTGTTGGATTCGACATCACTC 201783
Query 32365 CCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATA 32424
||||||| || || || || || | || || || || |||||||| ||||||| ||| |
Sbjct 201784 CCATTTTCTGATACTCGCCTACTCCCTTCTCAAAGAAGTTAGTTTTCCCTTCTAGTGAAA 201843
Query 32425 TATTTTCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAA-TTCA 32483
|||| ||||| || | |||||||| || || |||| || ||||| |||| ||||
Sbjct 201844 TATTCTCCATAAAGTTAAATGGATTTTCTACTTTGAAAATCTTGTTAAAGCCCAGCTTCA 201903
Query 32484 GAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCT 32543
| | | | |||||||| |||||||| || || ||||||| |||||||| ||
Sbjct 201904 GCA-TAAGCCTATCTGCCACAAATTCAATGTACTGCTTCATCAAAGTGCAATTCATCCCA 201962
Query 32544 ATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTT 32603
|| || || | || | || | || || || || || || || || || | |
Sbjct 201963 ATTAGCTTCTCAGGCAAGGCTTCTGTGAGGAACTCCTGATCTATCTTGAAGGCAT---TG 202019
Query 32604 ATAATAGATC---TTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAA 32660
||||| | | ||||| | | || ||| | | | ||||| | |||||
Sbjct 202020 ATAATTGTTTCTTTTACTCTCTGCTCTGATGGTTTGTGAAGCAGGTGTTTGAGCATCAGG 202079
Query 32661 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 32720
|| || || || ||||||| |||||| ||||| ||||| | ||| |||||||| |||||
Sbjct 202080 CAGGCAAAGTCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGG 202139
Query 32721 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 32780
|| ||||| || || || || || ||||| ||||||||
Sbjct 202140 CCAGGCATCAGTCCTCGTTTCTTGAGCCA----------------------GAAAAGAAG 202177
Query 32781 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGT 32837
|||| || | || |||||||| | || | |||||||| | | | ||||
Sbjct 202178 ATTCTGTCCATAGCAGCAAAGGCTACAACACGTTCTCCATAGGTAGCCTCTTTGTCCCCA 202237
Query 32838 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 32897
||| | | ||||| ||| ||||| || |||||||||||||| || | |||||
Sbjct 202238 ATCAAATGCAAGGCCCAT--GGCTTTCTTCTTCACACAAGGCATTGTTTCAGTGGCATTG 202295
Query 32898 AAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATT 32957
|||||| | | |||| || ||||||| ||| || ||||| | |||||||||||||
Sbjct 202296 AAGAGAAATTCCCTTTCTTTGAAGTCTTTAATATAAGTGTCAATAAGAAGACTATACATT 202355
Query 32958 TCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATC 33017
|| ||||| |||||||| ||||| ||||| || || ||||| | | || || |||||
Sbjct 202356 TCAGAATGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACTGCGGGCTTCTGTAATT 202415
Query 33018 TGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 33077
|| |||||| | |||| | || | ||||| || || ||||| | |||| || |||
Sbjct 202416 TGAACTTCTTGGCTAAATGGCTCCACCAAATTCTCCTTTACTATGCTATCACCTGCCGCA 202475
Query 33078 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCA 33137
| || |||| | || ||||||||||| ||| || || | || | ||| |
Sbjct 202476 GAGAAAGCCAGAATGTG-GATATAAAATATTGTTCCTCAGGCTTCAGGGCTTCCCAGTGC 202534
Query 33138 TTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTA 33197
| || || | || | | |||| || || |||||||||| || ||||| || || |||
Sbjct 202535 TGAATGTCCCTGGA-AGAGCCACCTCCTCAGCTGTCCAAAAGGAAGCCTCAGCTTTCTTA 202593
Query 33198 TACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 33241
|||| | || ||| |||| | || || ||||| || || ||
Sbjct 202594 CACATCTGCCGGATACCATGGTGTTCCATAGGAAAGATGACCAA 202637
>seq59
Length=10161055
Score = 179 bits (198), Expect = 5e-40
Identities = 568/875 (65%), Gaps = 19/875 (2%)
Strand=Plus/Minus
Query 32356 ACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTT 32415
|||| |||||||| | || || || || || | || || |||||||| || ||||
Sbjct 9903270 ACATCACTCCCATCCTCTGATACTCGCCTAC-----TATCAAAGAAATTAGTCTTCCCTT 9903216
Query 32416 CTAATGATATATTTTCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATC 32475
|| |||| ||| |||| || | |||||||| || | ||| || |||||
Sbjct 9903215 CTGATGAACCATTCCCCATAAAGACAAATGGATTTTCCACTCTGAAAACCTTCTTAAAGT 9903156
Query 32476 CCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAAT 32535
|||| || || | || ||||| || ||||| || | |||||| ||| |
Sbjct 9903155 CCAACTCTAGCATGAGCCTGTCTGCCACGAATTCAATGAACTGCTTCATCCAAGTACAGT 9903096
Query 32536 TCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCG 32595
|| | || || || || | || | ||| |||| || | || ||||| || ||| |
Sbjct 9903095 TCCTCCCAATGAGCTTCATGGGCAAGGCCTCAGTGAGGAGCTCCTGTTCCATCCTGACAG 9903036
Query 32596 CGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACA 32655
| | || || || ||||| | | || |||| | | | | || |||
Sbjct 9903035 CATTGACGATTATTTATTTTACTCTCTGCTCTGATGGTGTGTGTAGCAGGTATTCGGACA 9902976
Query 32656 TCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACG 32715
|| || || || || |||||| |||||||||||| || || | ||| |||||||| |
Sbjct 9902975 TCGGGCA-GCAAATTCAGAGTGTAAACCCTCGTCTCTGCTGATAAGTTCATTGGAAAATG 9902917
Query 32716 TGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAA 32775
|||| || ||||| || | || | ||||||||||| || |||||||| |||||||
Sbjct 9902916 TGAGGCCAGGCATCAGTTC-----TTATGAGCCAAAATATTGATGCAAATGAGCCAGAAA 9902862
Query 32776 AGAAAATTCCTTC--TACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCT 32830
|||| ||| || | || || || ||| | | || | | || || | | | |
Sbjct 9902861 AGAAGATTTCTCCCGTAGTG--GCCAAGACTACAACACGTTTTCTGTAGGTAGCTTCTTT 9902804
Query 32831 GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTAT 32890
||| |||| || || || || ||||| || || |||||||| | || ||
Sbjct 9902803 GTCCCCAGTCCAACACAAGGCACAGTCTGCTTTCTTCTTCACCCAAGGCATCATTTCAAT 9902744
Query 32891 AGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACT 32950
||| | ||||| | | | || | || ||||| || | ||||| | ||||
Sbjct 9902743 GGCACTGGAGAGAAATTCCCTGTCTTAGGAATTTTTAATGTAAATGTCAATAAGGAGACC 9902684
Query 32951 ATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTC 33010
||| ||||| ||||| |||||||| || || | ||| || || |||| || | || ||
Sbjct 9902683 ATATATTTCAGAATGTATGTTTTCCATAGCAACTTGGAAGCCACAGAAACAGCCGGCTTC 9902624
Query 33011 GGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACT 33070
|||| || || ||| | |||||| | | | ||||||| | |||| || ||||
Sbjct 9902623 TATAATTTGAACCTCTTGGCTAAATCGCTGCACCAGATTTTCACTTGCTATGCCATCACG 9902564
Query 33071 GGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATT 33130
||| |||| || || | |||||| |||||||||| ||| || || | || |
Sbjct 9902563 TGCTTCAAAGAAAGCTAGAACATGTGATATAAAATATCATTCCTCAGGCTTCAGGGCCTG 9902504
Query 33131 CCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGC 33190
|| | | | || || || | |||||| || ||| ||||||| || || ||||| ||
Sbjct 9902503 CCGGTGCTGACTGTCCTTGGAAAGATCCACCTCCTCCGCTGTCCAGAAGGACGCCTCGGC 9902444
Query 33191 CTTTTTATACATATTCCAGATGTCATGAT-ATTGA 33224
|| |||||||| | ||| || ||||| | |||||
Sbjct 9902443 TTTCTTATACATTTGCCAAATATCATGGTGATTGA 9902409
>seq260
Length=2306558
Score = 172 bits (190), Expect = 7e-38
Identities = 615/947 (65%), Gaps = 22/947 (2%)
Strand=Plus/Plus
Query 32305 TTATGTTTCTTTAAAAGTCAACATCTAGAGAAAAATGATTGTCTTCTTGA---GACATAA 32361
|| |||| |||| |||||| |||| | | ||||| ||| || | || |||||
Sbjct 2179926 TTCTGTTCATTTAGAAGTCAGCATCCAAGGTAAAATAATTCCCTGTTGGATTTGACATCT 2179985
Query 32362 CTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATG 32421
|||||| | || || ||||| || || || || || ||| | || |||| | |
Sbjct 2179986 CTCCCACCCTCTGATACTCACCTACTTTCTTCTCAAAGAAGTTAATCTTGTCTTCCATTA 2180045
Query 32422 ATATATTTTCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAA-T 32480
| ||||| ||||| || || |||| ||| || | ||| || |||| |||| |
Sbjct 2180046 A-ATATTCTCCATAAAGTCAAATGAATTTTCTACTCTGAAAACCTTGCTAAAGCCCAGCT 2180104
Query 32481 TCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATT 32540
||| | | || || | ||| || ||||| ||||| ||||||| || || ||
Sbjct 2180105 TCATCA-TAAACCTGTGTGCCACGAATTCAATATACTGCTTCATCAAAGTGCAGTTTATC 2180163
Query 32541 CCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCT 32600
|| | | || || || | |||| | | | || || ||||| | ||| || | |
Sbjct 2180164 CCAGTGAACTTCACAGGCAAAGCCTCCATGATGAACTCCTGTTCTAAGCTGACAGCAT-T 2180222
Query 32601 GTTATAATAGATCTT--ACTGTTT-CTTCACTCGGTGGATACAATAAATGTTTAAACATC 32657
| || |||| |||| ||| | | || || | | | | | | | ||||| ||||||
Sbjct 2180223 GATA-AATATTTCTTTTACTCTCTGCTCCAATGGTTTG-TGTAGCAGGTGTTTGAACATC 2180280
Query 32658 AAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTG 32717
| || || | || | ||| |||||| ||||| ||||| | ||| |||||| |
Sbjct 2180281 AGGCAAGCAGAGTCATAAAGTAAACCCTCATCTCTGCTAATAAGTTCACTGGAAAC--TT 2180338
Query 32718 AGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAG 32777
|| || ||||| | || | || || | | | ||||| || |||| || || | |||
Sbjct 2180339 AGGCCAGGCATCAATCCCTGTTTCTTGAACTAGAATATTGATTCAAAAGAAACATAGAAG 2180398
Query 32778 AAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCA 32834
|| ||||||| || ||| ||||||| | || | |||| || | | | ||||
Sbjct 2180399 AAGTTTCCTTCCACAGCCACAAAGGCTACAACACATTCTCTGTAGGTAGCTTCTTTGTCC 2180458
Query 32835 TGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCA 32894
||||| | || ||| || || || |||||| |||||||||| || || |||
Sbjct 2180459 CCAATCCAATGCAAGACCTAATTTGCTTTTTTCTTTACATAAGGCATTGTTTCAATGGCA 2180518
Query 32895 TTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATAC 32954
|| |||||| | | |||| || |||||| || || ||||| | |||||||||
Sbjct 2180519 TTGAAGAGAAATTCCCTTTCTTTGAAATCTTT----TAAGTGTCAATAAGGAGACTATAC 2180574
Query 32955 ATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTA 33014
||||| |||| | |||||| |||| ||||| || | ||||| || | | || |||
Sbjct 2180575 ATTTCACAATGTAGTTTTTCA-TGGCAATTTGGAAGTCATAGAAACAGTGAACTTCTGTA 2180633
Query 33015 ATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCT 33074
|| || ||||| | |||| || | ||||||||||| ||||| || ||||| |||
Sbjct 2180634 ATTTGAACTTCCTGGCTTAATCACTCCACCAAATTTTCATTTACTATGCCATCACTTGCT 2180693
Query 33075 GCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAA 33134
||||| || || | ||| ||||||||| ||| || | | | || | | |
Sbjct 2180694 GCAAAGAAATTCATAATATGAGACATAAAATATCATTCCTCAGATTTCAGGGCTTCCTAG 2180753
Query 33135 TCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 33194
| || || || || ||| |||| || | |||| |||| || | || |||||
Sbjct 2180754 TGCAGAATGTCCTTGGAAATAGCCACCTCCCCATATGTCAAAAAGGAACCTTCAGCCTTC 2180813
Query 33195 TTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 33241
||| | || | ||| || ||||| ||| || ||||| | |||||
Sbjct 2180814 TTAGAAATCTGCCAAATATCATGGTATCTGATAGGAAAGAAGACAAA 2180860
>seq131
Length=5549739
Score = 168 bits (186), Expect = 8e-37
Identities = 264/376 (70%), Gaps = 4/376 (1%)
Strand=Plus/Minus
Query 32746 GCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAA 32805
|||| ||||| ||| |||| || ||||||||||| |||||||| | | |||||||| |
Sbjct 3233252 GCCAGAATATTGACACAAAAGAACCAGAAAAGAAGATTCCTTCCGCAGTGGCAAAGGCTA 3233193
Query 32806 TAA---GTCTCTCTCCATAACCGGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCT 32862
|| || | | || || | ||| ||||| | |||||||| || |
Sbjct 3233192 AAACATGTTCTTGTAGGTAGCCT-CTTTGTTCCCAATCCAACTCAAGGCCCAATCTGCTT 3233134
Query 32863 TCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTAT 32922
|| | || ||||||||||| | || |||||||| ||||| | | |||| ||| ||
Sbjct 3233133 TCCTCTTCACACAAGGCATCCTTTCAATAGCATTGGAGAGAAATTCCCTTTCTTTAGAAT 3233074
Query 32923 CTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCA 32982
|||||| || || ||||| | ||||| ||||||| ||||| |||||||| |||| |
Sbjct 3233073 CTTTAATGTAAGTGTCAATAAGGAGACTCTACATTTTAGAATGCATGTTTTCTGTGGCAA 3233014
Query 32983 TTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTG 33042
|| || || ||||| || | | || ||||| || |||||| | |||| |||
Sbjct 3233013 CCTGGAAGCCATAGAAACAGCCCACTTCTGTAATTTGAACTTCTTGGCTAAATTATTCCA 3232954
Query 33043 CTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAA 33102
| ||||||||||| |||| || ||||| |||||||| || |||| ||| | |||||
Sbjct 3232953 CCAAATTTTCATTTGCTATGCCATCACTTGCTGCAAAGAAAGCCAGGACAAGCAATATAA 3232894
Query 33103 AATATTTTTCGTCTGG 33118
||||| ||| || ||
Sbjct 3232893 AATATCGTTCCTCAGG 3232878
>seq58
Length=10378366
Score = 141 bits (156), Expect = 1e-28
Identities = 288/424 (68%), Gaps = 19/424 (4%)
Strand=Plus/Plus
Query 32684 CTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTT 32743
||| ||||| ||||| | ||| |||||||| ||||| || ||||| || | | || ||
Sbjct 1968820 CTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGACCAGGCATCAGCCGTCATTTCTT 1968879
Query 32744 AAGCCAAAATATG--GACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAG 32801
||| || ||||| || ||||| || ||||||||||| ||| |||| || ||||||
Sbjct 1968880 AAGTCAGAATATATTGATGCAAAAGAACCAGAAAAGAAGATTTCTTCCACATTAGCAAAG 1968939
Query 32802 GCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCC 32861
|| | | ||||||| || | | | ||||| || || |||| |
Sbjct 1968940 GCTACATCATGCTCTCCACAAATAGACTTTT----TATCCTGATT----CCAAATCTGTT 1968991
Query 32862 TTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTA 32921
||||| || ||||||||||| | || | |||| |||| | | | |||||| || |
Sbjct 1968992 TTCTTCTTCACACAAGGCATCATTTCAGTGCCATTGAAGATAAATTCTTTTTCTTTGGAA 1969051
Query 32922 TCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCC 32981
| |||| |||| |||| | | ||| || ||| | ||||| || ||| | |||||
Sbjct 1969052 TTTTTA----ATGTGACAATAAGGAAACTGTATATTACAGAATGTATTTTTCCTATGGCA 1969107
Query 32982 ATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCT 33041
||||| ||||| ||||| || || || ||||| || | |||| | |||| | |
Sbjct 1969108 ATTTGGAATCCATAGAAACAGTGGGCTTCTGTAATTTGAATTTCTTGGCTAAATTGCTTC 1969167
Query 33042 GCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATA 33101
| || ||||||| | ||| || |||| |||| |||| |||| |||||| ||||
Sbjct 1969168 ACCAATTTTTCATGTATTATGCCATCAC---CTGCTAAAA--GCCAGAACATGTGCTATA 1969222
Query 33102 AAAT 33105
||||
Sbjct 1969223 AAAT 1969226
>seq30
Length=14751797
Score = 122 bits (134), Expect = 1e-22
Identities = 109/137 (80%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 62192 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 62251
|| ||||||||||| ||||| ||||| ||||| || ||||| ||||| || ||||| |
Sbjct 820281 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTATAGATATTGCTGGTGTAAGGTTCAATG 820340
Query 62252 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62311
||||||||||| |||| || ||||||||||| ||||| ||||| || || | | ||||
Sbjct 820341 GACTCATTATTCCCCAGGATCTGAGCAGTTGAAGCAGTAGGCATCGGGGCAATAAGTAAA 820400
Query 62312 CTATTTCTAAGACCGTA 62328
|| ||||| | ||| ||
Sbjct 820401 CTGTTTCTTACACCATA 820417
Score = 118 bits (130), Expect = 1e-21
Identities = 118/153 (77%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 63067 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCT 63126
|| ||| |||||||| |||||||| |||||||||||||| | || ||||| |||| ||
Sbjct 832087 CTCCACCCGTTTCATGAAGAGATCTGGAATCCAAAGAGCAAAGAAAAGATCCCTGGCTCG 832146
Query 63127 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 63186
|| ||||| |||||||| ||||| || | ||| |||||| | | || || |||||||
Sbjct 832147 CTGCTCCTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAACTCAAAGATGTCTAAATGCCA 832206
Query 63187 CGGTTCCAAGTATATGGCCATAACTCCAGGCCG 63219
||||||| ||| || || | ||||||| ||
Sbjct 832207 AGGTTCCAGGTAAATAGCAAATGCTCCAGGACG 832239
Score = 105 bits (116), Expect = 8e-18
Identities = 123/166 (74%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 63810 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAA 63869
|||| |||| ||| |||||||||||||| | || || || || ||||| || || | |
Sbjct 843145 CACTGAATACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACAGCAATTCTTGCTGCCAAGA 843204
Query 63870 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 63929
||||||| || || || | ||||| | || || ||| |||| || |||||||| || |
Sbjct 843205 TGGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAGAGTATCTA 843264
Query 63930 ATTCTACCGTTGTTACACCATTATATATTCCTTGGATAACCTTCAT 63975
||| || || || || ||| | |||| |||||||| || |||||
Sbjct 843265 GTTCCACTGTGGTAACTCCACTGTATAAGCCTTGGATTACTTTCAT 843310
>seq64
Length=9676502
Score = 111 bits (122), Expect = 2e-19
Identities = 97/121 (80%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 32683 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 32742
|||| ||||| ||||| | ||| |||||||| ||||| || ||||| || || || || |
Sbjct 6351547 CCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 6351488
Query 32743 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 32802
| ||||| ||||| || ||||| || ||||||||||| ||||| || || || |||||||
Sbjct 6351487 TGAGCCAGAATATTGAAGCAAAAGAACCAGAAAAGAAGATTCCCTCCACAGCAGCAAAGG 6351428
Query 32803 C 32803
|
Sbjct 6351427 C 6351427
Score = 89.7 bits (98), Expect = 7e-13
Identities = 91/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 32922 TCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCC 32981
||||||| || || ||||| | |||||||||||||| ||||| |||||||| |||||
Sbjct 6349677 TCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGCA 6349618
Query 32982 ATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTC 33040
||||| || || ||||| || | || || |||| || |||||| | |||||| ||
Sbjct 6349617 ATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAACTTGAACTTCTTGGCTAAATCGCTC 6349559
>seq3
Length=41493964
Score = 111 bits (122), Expect = 2e-19
Identities = 149/207 (72%), Gaps = 3/207 (1%)
Strand=Plus/Plus
Query 30452 TTGTACTTCTTTCAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATC 30511
||| ||||||| | ||||||||| | || |||| | | || ||||| ||||||| |||
Sbjct 8287232 TTGAACTTCTTCTATATCTGGATAAAAAATCCGTTCACAAATGAGCTGTGCTATTCGATC 8287291
Query 30512 CCCCGTATTTACATTGAATGTACATTTTCCATTATTAATAAGAATGACTCCTATATTTCC 30571
|| | ||||| | || | ||| ||| ||||| | | || || ||||||||
Sbjct 8287292 ACCTTTTTTTACTTCAAACTTCTCTTTACCAAAATTAAACAACACAACACCAATATTTCC 8287351
Query 30572 CCTATAATCTTCGTCTATTACACCGCCTCCTATATCAAT---GCCTTTTAGGGACAGACC 30628
||||||||||| ||||| ||||| |||||| ||| || | |||| | ||| ||
Sbjct 8287352 TCTATAATCTTCATCTATGACACCAGCTCCTACATCTATGAAGTATTTTGCAGCCAGGCC 8287411
Query 30629 AGACCTAGGAGCTATTCTACCATAGCA 30655
||| | ||||||||||| ||||||||
Sbjct 8287412 AGAACGTGGAGCTATTCTTCCATAGCA 8287438
>seq2
Length=46620681
Score = 102 bits (112), Expect = 1e-16
Identities = 94/119 (79%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 32685 TCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 32744
|| ||||| || || | ||| |||||||| ||||| || ||||| || || | ||| ||
Sbjct 41377775 TCATCTCTGCTGATCAGTTCATTGGAAAATGTGAGCCCAGGCATGAGACCTCTCTTCTTT 41377716
Query 32745 AGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGC 32803
||||| ||||| | ||||| ||||| || |||||||||||||| || || ||||||||
Sbjct 41377715 AGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCCTTCCACAGCAGCAAAGGC 41377657
Score = 86.0 bits (94), Expect = 8e-12
Identities = 70/85 (82%), Gaps = 0/85 (0%)
Strand=Plus/Minus
Query 33159 ACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGA 33218
|| ||||| ||||||| || ||||||| ||||| ||||||||| ||||| || ||| |
Sbjct 41366933 ACCTCTTCTGCTGTCCAGAAGGATGCCTGTGCCTGTTTATACATTTTCCAAATATCAGGG 41366874
Query 33219 TATTGAATTGGAAAAATAACAAATC 33243
|| || ||||||||||| |||||||
Sbjct 41366873 TACTGGATTGGAAAAATGACAAATC 41366849
>seq299
Length=1791600
Score = 98.7 bits (108), Expect = 1e-15
Identities = 107/142 (75%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 33101 AAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCAC 33160
|||||| || || |||| | | || || ||| | | | || ||| || |||| || ||
Sbjct 1082285 AAAATAATTCTCATCTGATTTAAGCTTGTTCTAGTGAAGGAGATCCTTTGATAAGTCAAC 1082226
Query 33161 TTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATA 33220
||||| ||||||| || ||||||| ||||| || |||||| ||||| || ||| | ||
Sbjct 1082225 CTCTTCTGCTGTCCAGAAGGATGCCTGTGCCTGTTCATACATTTTCCAAATATCAGGGTA 1082166
Query 33221 TTGAATTGGAAAAATAACAAAT 33242
||||||||||| || ||||||
Sbjct 1082165 CTGAATTGGAAATATGACAAAT 1082144
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633533129646800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |