Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ictidomys_20tridecemlineatus_20[refseq_20GCF_5F000236235.1_202011- 11-29] 12,483 sequences; 2,478,393,770 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq536 291 1e-73 seq59 179 5e-40 seq260 172 7e-38 seq131 168 8e-37 seq58 141 1e-28 seq30 122 1e-22 seq64 111 2e-19 seq3 111 2e-19 seq2 102 1e-16 seq299 98.7 1e-15 >seq536 Length=337149 Score = 291 bits (322), Expect = 1e-73 Identities = 633/944 (67%), Gaps = 40/944 (4%) Strand=Plus/Plus Query 32308 TGTTTCTTTAAAAGTCAACATCTAGAGAAAAATGATTGTCTTCTTGA---GACATAACTC 32364 |||| ||||||||||| |||| | | |||| ||| ||| | || ||||| |||| Sbjct 201724 TGTTCATTTAAAAGTCAGCATCCAAGGTAAAAGAATTATCTGTTGGATTCGACATCACTC 201783 Query 32365 CCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATA 32424 ||||||| || || || || || | || || || || |||||||| ||||||| ||| | Sbjct 201784 CCATTTTCTGATACTCGCCTACTCCCTTCTCAAAGAAGTTAGTTTTCCCTTCTAGTGAAA 201843 Query 32425 TATTTTCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAA-TTCA 32483 |||| ||||| || | |||||||| || || |||| || ||||| |||| |||| Sbjct 201844 TATTCTCCATAAAGTTAAATGGATTTTCTACTTTGAAAATCTTGTTAAAGCCCAGCTTCA 201903 Query 32484 GAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCT 32543 | | | | |||||||| |||||||| || || ||||||| |||||||| || Sbjct 201904 GCA-TAAGCCTATCTGCCACAAATTCAATGTACTGCTTCATCAAAGTGCAATTCATCCCA 201962 Query 32544 ATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTT 32603 || || || | || | || | || || || || || || || || || | | Sbjct 201963 ATTAGCTTCTCAGGCAAGGCTTCTGTGAGGAACTCCTGATCTATCTTGAAGGCAT---TG 202019 Query 32604 ATAATAGATC---TTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAA 32660 ||||| | | ||||| | | || ||| | | | ||||| | ||||| Sbjct 202020 ATAATTGTTTCTTTTACTCTCTGCTCTGATGGTTTGTGAAGCAGGTGTTTGAGCATCAGG 202079 Query 32661 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 32720 || || || || ||||||| |||||| ||||| ||||| | ||| |||||||| ||||| Sbjct 202080 CAGGCAAAGTCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGG 202139 Query 32721 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 32780 || ||||| || || || || || ||||| |||||||| Sbjct 202140 CCAGGCATCAGTCCTCGTTTCTTGAGCCA----------------------GAAAAGAAG 202177 Query 32781 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGT 32837 |||| || | || |||||||| | || | |||||||| | | | |||| Sbjct 202178 ATTCTGTCCATAGCAGCAAAGGCTACAACACGTTCTCCATAGGTAGCCTCTTTGTCCCCA 202237 Query 32838 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 32897 ||| | | ||||| ||| ||||| || |||||||||||||| || | ||||| Sbjct 202238 ATCAAATGCAAGGCCCAT--GGCTTTCTTCTTCACACAAGGCATTGTTTCAGTGGCATTG 202295 Query 32898 AAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATT 32957 |||||| | | |||| || ||||||| ||| || ||||| | ||||||||||||| Sbjct 202296 AAGAGAAATTCCCTTTCTTTGAAGTCTTTAATATAAGTGTCAATAAGAAGACTATACATT 202355 Query 32958 TCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATC 33017 || ||||| |||||||| ||||| ||||| || || ||||| | | || || ||||| Sbjct 202356 TCAGAATGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACTGCGGGCTTCTGTAATT 202415 Query 33018 TGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 33077 || |||||| | |||| | || | ||||| || || ||||| | |||| || ||| Sbjct 202416 TGAACTTCTTGGCTAAATGGCTCCACCAAATTCTCCTTTACTATGCTATCACCTGCCGCA 202475 Query 33078 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCA 33137 | || |||| | || ||||||||||| ||| || || | || | ||| | Sbjct 202476 GAGAAAGCCAGAATGTG-GATATAAAATATTGTTCCTCAGGCTTCAGGGCTTCCCAGTGC 202534 Query 33138 TTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTA 33197 | || || | || | | |||| || || |||||||||| || ||||| || || ||| Sbjct 202535 TGAATGTCCCTGGA-AGAGCCACCTCCTCAGCTGTCCAAAAGGAAGCCTCAGCTTTCTTA 202593 Query 33198 TACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 33241 |||| | || ||| |||| | || || ||||| || || || Sbjct 202594 CACATCTGCCGGATACCATGGTGTTCCATAGGAAAGATGACCAA 202637 >seq59 Length=10161055 Score = 179 bits (198), Expect = 5e-40 Identities = 568/875 (65%), Gaps = 19/875 (2%) Strand=Plus/Minus Query 32356 ACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTT 32415 |||| |||||||| | || || || || || | || || |||||||| || |||| Sbjct 9903270 ACATCACTCCCATCCTCTGATACTCGCCTAC-----TATCAAAGAAATTAGTCTTCCCTT 9903216 Query 32416 CTAATGATATATTTTCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATC 32475 || |||| ||| |||| || | |||||||| || | ||| || ||||| Sbjct 9903215 CTGATGAACCATTCCCCATAAAGACAAATGGATTTTCCACTCTGAAAACCTTCTTAAAGT 9903156 Query 32476 CCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAAT 32535 |||| || || | || ||||| || ||||| || | |||||| ||| | Sbjct 9903155 CCAACTCTAGCATGAGCCTGTCTGCCACGAATTCAATGAACTGCTTCATCCAAGTACAGT 9903096 Query 32536 TCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCG 32595 || | || || || || | || | ||| |||| || | || ||||| || ||| | Sbjct 9903095 TCCTCCCAATGAGCTTCATGGGCAAGGCCTCAGTGAGGAGCTCCTGTTCCATCCTGACAG 9903036 Query 32596 CGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACA 32655 | | || || || ||||| | | || |||| | | | | || ||| Sbjct 9903035 CATTGACGATTATTTATTTTACTCTCTGCTCTGATGGTGTGTGTAGCAGGTATTCGGACA 9902976 Query 32656 TCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACG 32715 || || || || || |||||| |||||||||||| || || | ||| |||||||| | Sbjct 9902975 TCGGGCA-GCAAATTCAGAGTGTAAACCCTCGTCTCTGCTGATAAGTTCATTGGAAAATG 9902917 Query 32716 TGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAA 32775 |||| || ||||| || | || | ||||||||||| || |||||||| ||||||| Sbjct 9902916 TGAGGCCAGGCATCAGTTC-----TTATGAGCCAAAATATTGATGCAAATGAGCCAGAAA 9902862 Query 32776 AGAAAATTCCTTC--TACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCT 32830 |||| ||| || | || || || ||| | | || | | || || | | | | Sbjct 9902861 AGAAGATTTCTCCCGTAGTG--GCCAAGACTACAACACGTTTTCTGTAGGTAGCTTCTTT 9902804 Query 32831 GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTAT 32890 ||| |||| || || || || ||||| || || |||||||| | || || Sbjct 9902803 GTCCCCAGTCCAACACAAGGCACAGTCTGCTTTCTTCTTCACCCAAGGCATCATTTCAAT 9902744 Query 32891 AGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACT 32950 ||| | ||||| | | | || | || ||||| || | ||||| | |||| Sbjct 9902743 GGCACTGGAGAGAAATTCCCTGTCTTAGGAATTTTTAATGTAAATGTCAATAAGGAGACC 9902684 Query 32951 ATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTC 33010 ||| ||||| ||||| |||||||| || || | ||| || || |||| || | || || Sbjct 9902683 ATATATTTCAGAATGTATGTTTTCCATAGCAACTTGGAAGCCACAGAAACAGCCGGCTTC 9902624 Query 33011 GGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACT 33070 |||| || || ||| | |||||| | | | ||||||| | |||| || |||| Sbjct 9902623 TATAATTTGAACCTCTTGGCTAAATCGCTGCACCAGATTTTCACTTGCTATGCCATCACG 9902564 Query 33071 GGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATT 33130 ||| |||| || || | |||||| |||||||||| ||| || || | || | Sbjct 9902563 TGCTTCAAAGAAAGCTAGAACATGTGATATAAAATATCATTCCTCAGGCTTCAGGGCCTG 9902504 Query 33131 CCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGC 33190 || | | | || || || | |||||| || ||| ||||||| || || ||||| || Sbjct 9902503 CCGGTGCTGACTGTCCTTGGAAAGATCCACCTCCTCCGCTGTCCAGAAGGACGCCTCGGC 9902444 Query 33191 CTTTTTATACATATTCCAGATGTCATGAT-ATTGA 33224 || |||||||| | ||| || ||||| | ||||| Sbjct 9902443 TTTCTTATACATTTGCCAAATATCATGGTGATTGA 9902409 >seq260 Length=2306558 Score = 172 bits (190), Expect = 7e-38 Identities = 615/947 (65%), Gaps = 22/947 (2%) Strand=Plus/Plus Query 32305 TTATGTTTCTTTAAAAGTCAACATCTAGAGAAAAATGATTGTCTTCTTGA---GACATAA 32361 || |||| |||| |||||| |||| | | ||||| ||| || | || ||||| Sbjct 2179926 TTCTGTTCATTTAGAAGTCAGCATCCAAGGTAAAATAATTCCCTGTTGGATTTGACATCT 2179985 Query 32362 CTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATG 32421 |||||| | || || ||||| || || || || || ||| | || |||| | | Sbjct 2179986 CTCCCACCCTCTGATACTCACCTACTTTCTTCTCAAAGAAGTTAATCTTGTCTTCCATTA 2180045 Query 32422 ATATATTTTCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAA-T 32480 | ||||| ||||| || || |||| ||| || | ||| || |||| |||| | Sbjct 2180046 A-ATATTCTCCATAAAGTCAAATGAATTTTCTACTCTGAAAACCTTGCTAAAGCCCAGCT 2180104 Query 32481 TCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATT 32540 ||| | | || || | ||| || ||||| ||||| ||||||| || || || Sbjct 2180105 TCATCA-TAAACCTGTGTGCCACGAATTCAATATACTGCTTCATCAAAGTGCAGTTTATC 2180163 Query 32541 CCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCT 32600 || | | || || || | |||| | | | || || ||||| | ||| || | | Sbjct 2180164 CCAGTGAACTTCACAGGCAAAGCCTCCATGATGAACTCCTGTTCTAAGCTGACAGCAT-T 2180222 Query 32601 GTTATAATAGATCTT--ACTGTTT-CTTCACTCGGTGGATACAATAAATGTTTAAACATC 32657 | || |||| |||| ||| | | || || | | | | | | | ||||| |||||| Sbjct 2180223 GATA-AATATTTCTTTTACTCTCTGCTCCAATGGTTTG-TGTAGCAGGTGTTTGAACATC 2180280 Query 32658 AAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTG 32717 | || || | || | ||| |||||| ||||| ||||| | ||| |||||| | Sbjct 2180281 AGGCAAGCAGAGTCATAAAGTAAACCCTCATCTCTGCTAATAAGTTCACTGGAAAC--TT 2180338 Query 32718 AGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAG 32777 || || ||||| | || | || || | | | ||||| || |||| || || | ||| Sbjct 2180339 AGGCCAGGCATCAATCCCTGTTTCTTGAACTAGAATATTGATTCAAAAGAAACATAGAAG 2180398 Query 32778 AAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCA 32834 || ||||||| || ||| ||||||| | || | |||| || | | | |||| Sbjct 2180399 AAGTTTCCTTCCACAGCCACAAAGGCTACAACACATTCTCTGTAGGTAGCTTCTTTGTCC 2180458 Query 32835 TGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCA 32894 ||||| | || ||| || || || |||||| |||||||||| || || ||| Sbjct 2180459 CCAATCCAATGCAAGACCTAATTTGCTTTTTTCTTTACATAAGGCATTGTTTCAATGGCA 2180518 Query 32895 TTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATAC 32954 || |||||| | | |||| || |||||| || || ||||| | ||||||||| Sbjct 2180519 TTGAAGAGAAATTCCCTTTCTTTGAAATCTTT----TAAGTGTCAATAAGGAGACTATAC 2180574 Query 32955 ATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTA 33014 ||||| |||| | |||||| |||| ||||| || | ||||| || | | || ||| Sbjct 2180575 ATTTCACAATGTAGTTTTTCA-TGGCAATTTGGAAGTCATAGAAACAGTGAACTTCTGTA 2180633 Query 33015 ATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCT 33074 || || ||||| | |||| || | ||||||||||| ||||| || ||||| ||| Sbjct 2180634 ATTTGAACTTCCTGGCTTAATCACTCCACCAAATTTTCATTTACTATGCCATCACTTGCT 2180693 Query 33075 GCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAA 33134 ||||| || || | ||| ||||||||| ||| || | | | || | | | Sbjct 2180694 GCAAAGAAATTCATAATATGAGACATAAAATATCATTCCTCAGATTTCAGGGCTTCCTAG 2180753 Query 33135 TCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 33194 | || || || || ||| |||| || | |||| |||| || | || ||||| Sbjct 2180754 TGCAGAATGTCCTTGGAAATAGCCACCTCCCCATATGTCAAAAAGGAACCTTCAGCCTTC 2180813 Query 33195 TTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 33241 ||| | || | ||| || ||||| ||| || ||||| | ||||| Sbjct 2180814 TTAGAAATCTGCCAAATATCATGGTATCTGATAGGAAAGAAGACAAA 2180860 >seq131 Length=5549739 Score = 168 bits (186), Expect = 8e-37 Identities = 264/376 (70%), Gaps = 4/376 (1%) Strand=Plus/Minus Query 32746 GCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAA 32805 |||| ||||| ||| |||| || ||||||||||| |||||||| | | |||||||| | Sbjct 3233252 GCCAGAATATTGACACAAAAGAACCAGAAAAGAAGATTCCTTCCGCAGTGGCAAAGGCTA 3233193 Query 32806 TAA---GTCTCTCTCCATAACCGGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCT 32862 || || | | || || | ||| ||||| | |||||||| || | Sbjct 3233192 AAACATGTTCTTGTAGGTAGCCT-CTTTGTTCCCAATCCAACTCAAGGCCCAATCTGCTT 3233134 Query 32863 TCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTAT 32922 || | || ||||||||||| | || |||||||| ||||| | | |||| ||| || Sbjct 3233133 TCCTCTTCACACAAGGCATCCTTTCAATAGCATTGGAGAGAAATTCCCTTTCTTTAGAAT 3233074 Query 32923 CTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCA 32982 |||||| || || ||||| | ||||| ||||||| ||||| |||||||| |||| | Sbjct 3233073 CTTTAATGTAAGTGTCAATAAGGAGACTCTACATTTTAGAATGCATGTTTTCTGTGGCAA 3233014 Query 32983 TTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTG 33042 || || || ||||| || | | || ||||| || |||||| | |||| ||| Sbjct 3233013 CCTGGAAGCCATAGAAACAGCCCACTTCTGTAATTTGAACTTCTTGGCTAAATTATTCCA 3232954 Query 33043 CTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAA 33102 | ||||||||||| |||| || ||||| |||||||| || |||| ||| | ||||| Sbjct 3232953 CCAAATTTTCATTTGCTATGCCATCACTTGCTGCAAAGAAAGCCAGGACAAGCAATATAA 3232894 Query 33103 AATATTTTTCGTCTGG 33118 ||||| ||| || || Sbjct 3232893 AATATCGTTCCTCAGG 3232878 >seq58 Length=10378366 Score = 141 bits (156), Expect = 1e-28 Identities = 288/424 (68%), Gaps = 19/424 (4%) Strand=Plus/Plus Query 32684 CTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTT 32743 ||| ||||| ||||| | ||| |||||||| ||||| || ||||| || | | || || Sbjct 1968820 CTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGACCAGGCATCAGCCGTCATTTCTT 1968879 Query 32744 AAGCCAAAATATG--GACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAG 32801 ||| || ||||| || ||||| || ||||||||||| ||| |||| || |||||| Sbjct 1968880 AAGTCAGAATATATTGATGCAAAAGAACCAGAAAAGAAGATTTCTTCCACATTAGCAAAG 1968939 Query 32802 GCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCC 32861 || | | ||||||| || | | | ||||| || || |||| | Sbjct 1968940 GCTACATCATGCTCTCCACAAATAGACTTTT----TATCCTGATT----CCAAATCTGTT 1968991 Query 32862 TTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTA 32921 ||||| || ||||||||||| | || | |||| |||| | | | |||||| || | Sbjct 1968992 TTCTTCTTCACACAAGGCATCATTTCAGTGCCATTGAAGATAAATTCTTTTTCTTTGGAA 1969051 Query 32922 TCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCC 32981 | |||| |||| |||| | | ||| || ||| | ||||| || ||| | ||||| Sbjct 1969052 TTTTTA----ATGTGACAATAAGGAAACTGTATATTACAGAATGTATTTTTCCTATGGCA 1969107 Query 32982 ATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCT 33041 ||||| ||||| ||||| || || || ||||| || | |||| | |||| | | Sbjct 1969108 ATTTGGAATCCATAGAAACAGTGGGCTTCTGTAATTTGAATTTCTTGGCTAAATTGCTTC 1969167 Query 33042 GCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATA 33101 | || ||||||| | ||| || |||| |||| |||| |||| |||||| |||| Sbjct 1969168 ACCAATTTTTCATGTATTATGCCATCAC---CTGCTAAAA--GCCAGAACATGTGCTATA 1969222 Query 33102 AAAT 33105 |||| Sbjct 1969223 AAAT 1969226 >seq30 Length=14751797 Score = 122 bits (134), Expect = 1e-22 Identities = 109/137 (80%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 62192 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 62251 || ||||||||||| ||||| ||||| ||||| || ||||| ||||| || ||||| | Sbjct 820281 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTATAGATATTGCTGGTGTAAGGTTCAATG 820340 Query 62252 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62311 ||||||||||| |||| || ||||||||||| ||||| ||||| || || | | |||| Sbjct 820341 GACTCATTATTCCCCAGGATCTGAGCAGTTGAAGCAGTAGGCATCGGGGCAATAAGTAAA 820400 Query 62312 CTATTTCTAAGACCGTA 62328 || ||||| | ||| || Sbjct 820401 CTGTTTCTTACACCATA 820417 Score = 118 bits (130), Expect = 1e-21 Identities = 118/153 (77%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 63067 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCT 63126 || ||| |||||||| |||||||| |||||||||||||| | || ||||| |||| || Sbjct 832087 CTCCACCCGTTTCATGAAGAGATCTGGAATCCAAAGAGCAAAGAAAAGATCCCTGGCTCG 832146 Query 63127 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 63186 || ||||| |||||||| ||||| || | ||| |||||| | | || || ||||||| Sbjct 832147 CTGCTCCTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAACTCAAAGATGTCTAAATGCCA 832206 Query 63187 CGGTTCCAAGTATATGGCCATAACTCCAGGCCG 63219 ||||||| ||| || || | ||||||| || Sbjct 832207 AGGTTCCAGGTAAATAGCAAATGCTCCAGGACG 832239 Score = 105 bits (116), Expect = 8e-18 Identities = 123/166 (74%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 63810 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAA 63869 |||| |||| ||| |||||||||||||| | || || || || ||||| || || | | Sbjct 843145 CACTGAATACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACAGCAATTCTTGCTGCCAAGA 843204 Query 63870 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 63929 ||||||| || || || | ||||| | || || ||| |||| || |||||||| || | Sbjct 843205 TGGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAGAGTATCTA 843264 Query 63930 ATTCTACCGTTGTTACACCATTATATATTCCTTGGATAACCTTCAT 63975 ||| || || || || ||| | |||| |||||||| || ||||| Sbjct 843265 GTTCCACTGTGGTAACTCCACTGTATAAGCCTTGGATTACTTTCAT 843310 >seq64 Length=9676502 Score = 111 bits (122), Expect = 2e-19 Identities = 97/121 (80%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 32683 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 32742 |||| ||||| ||||| | ||| |||||||| ||||| || ||||| || || || || | Sbjct 6351547 CCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 6351488 Query 32743 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 32802 | ||||| ||||| || ||||| || ||||||||||| ||||| || || || ||||||| Sbjct 6351487 TGAGCCAGAATATTGAAGCAAAAGAACCAGAAAAGAAGATTCCCTCCACAGCAGCAAAGG 6351428 Query 32803 C 32803 | Sbjct 6351427 C 6351427 Score = 89.7 bits (98), Expect = 7e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 32922 TCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCC 32981 ||||||| || || ||||| | |||||||||||||| ||||| |||||||| ||||| Sbjct 6349677 TCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGCA 6349618 Query 32982 ATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTC 33040 ||||| || || ||||| || | || || |||| || |||||| | |||||| || Sbjct 6349617 ATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAACTTGAACTTCTTGGCTAAATCGCTC 6349559 >seq3 Length=41493964 Score = 111 bits (122), Expect = 2e-19 Identities = 149/207 (72%), Gaps = 3/207 (1%) Strand=Plus/Plus Query 30452 TTGTACTTCTTTCAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATC 30511 ||| ||||||| | ||||||||| | || |||| | | || ||||| ||||||| ||| Sbjct 8287232 TTGAACTTCTTCTATATCTGGATAAAAAATCCGTTCACAAATGAGCTGTGCTATTCGATC 8287291 Query 30512 CCCCGTATTTACATTGAATGTACATTTTCCATTATTAATAAGAATGACTCCTATATTTCC 30571 || | ||||| | || | ||| ||| ||||| | | || || |||||||| Sbjct 8287292 ACCTTTTTTTACTTCAAACTTCTCTTTACCAAAATTAAACAACACAACACCAATATTTCC 8287351 Query 30572 CCTATAATCTTCGTCTATTACACCGCCTCCTATATCAAT---GCCTTTTAGGGACAGACC 30628 ||||||||||| ||||| ||||| |||||| ||| || | |||| | ||| || Sbjct 8287352 TCTATAATCTTCATCTATGACACCAGCTCCTACATCTATGAAGTATTTTGCAGCCAGGCC 8287411 Query 30629 AGACCTAGGAGCTATTCTACCATAGCA 30655 ||| | ||||||||||| |||||||| Sbjct 8287412 AGAACGTGGAGCTATTCTTCCATAGCA 8287438 >seq2 Length=46620681 Score = 102 bits (112), Expect = 1e-16 Identities = 94/119 (79%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 32685 TCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 32744 || ||||| || || | ||| |||||||| ||||| || ||||| || || | ||| || Sbjct 41377775 TCATCTCTGCTGATCAGTTCATTGGAAAATGTGAGCCCAGGCATGAGACCTCTCTTCTTT 41377716 Query 32745 AGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGC 32803 ||||| ||||| | ||||| ||||| || |||||||||||||| || || |||||||| Sbjct 41377715 AGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCCTTCCACAGCAGCAAAGGC 41377657 Score = 86.0 bits (94), Expect = 8e-12 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 33159 ACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGA 33218 || ||||| ||||||| || ||||||| ||||| ||||||||| ||||| || ||| | Sbjct 41366933 ACCTCTTCTGCTGTCCAGAAGGATGCCTGTGCCTGTTTATACATTTTCCAAATATCAGGG 41366874 Query 33219 TATTGAATTGGAAAAATAACAAATC 33243 || || ||||||||||| ||||||| Sbjct 41366873 TACTGGATTGGAAAAATGACAAATC 41366849 >seq299 Length=1791600 Score = 98.7 bits (108), Expect = 1e-15 Identities = 107/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 33101 AAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCAC 33160 |||||| || || |||| | | || || ||| | | | || ||| || |||| || || Sbjct 1082285 AAAATAATTCTCATCTGATTTAAGCTTGTTCTAGTGAAGGAGATCCTTTGATAAGTCAAC 1082226 Query 33161 TTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATA 33220 ||||| ||||||| || ||||||| ||||| || |||||| ||||| || ||| | || Sbjct 1082225 CTCTTCTGCTGTCCAGAAGGATGCCTGTGCCTGTTCATACATTTTCCAAATATCAGGGTA 1082166 Query 33221 TTGAATTGGAAAAATAACAAAT 33242 ||||||||||| || |||||| Sbjct 1082165 CTGAATTGGAAATATGACAAAT 1082144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633533129646800