Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ictidomys_20tridecemlineatus_20[refseq_20GCF_5F000236235.1_202011-
11-29] 12,483 sequences; 2,478,393,770 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq30 93.3 7e-14
>seq30
Length=14751797
Score = 93.3 bits (102), Expect = 7e-14
Identities = 111/151 (74%), Gaps = 0/151 (0%)
Strand=Plus/Plus
Query 203910 CCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGT 203969
||| || ||| || || | |||||| || ||||||| ||| || || || || |
Sbjct 817609 CCTGCTTCCAGCCATAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGTTCAGCAATAT 817668
Query 203970 GAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATATTGATAA 204029
| ||||||| |||||||||||| || ||||||| | | ||||| ||||| |||| ||
Sbjct 817669 GTATGTTCAAAGACTGGCTTTGATCAATGAAAGCACCTCTCTCTGCTGCCATTTTGAGAA 817728
Query 204030 TGGTCTTCTGCGAAATCTCCCACACCGTCTT 204060
|| ||||| || || |||||||| |||||
Sbjct 817729 CAGTTTTCTGAGAGATTTCCCACACAGTCTT 817759
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795031125970480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |