Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ictidomys_20tridecemlineatus_20[refseq_20GCF_5F000236235.1_202011-
11-29] 12,483 sequences; 2,478,393,770 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq259 181 4e-40
seq557 163 1e-34
seq362 156 2e-32
seq654 138 4e-27
seq10070 123 1e-22
seq1181 116 1e-20
seq291 116 1e-20
seq8380 113 2e-19
seq487 111 6e-19
seq455 105 3e-17
seq11036 102 3e-16
seq73 100 1e-15
seq19 96.9 1e-14
seq6 93.3 2e-13
seq26 91.5 6e-13
seq449 84.2 9e-11
seq30 84.2 9e-11
>seq259
Length=2316233
Score = 181 bits (200), Expect = 4e-40
Identities = 457/689 (66%), Gaps = 13/689 (2%)
Strand=Plus/Plus
Query 450913 AGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAA 450972
||| || || || || | || ||||||| ||| |||||||| || | ||| |||| ||
Sbjct 1742893 AGCCATAGGCATCGACTTGGGTACCACCTATTCTTGTGTAGGGGTGTTCCAGCATGGCAA 1742952
Query 450973 TGTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGT----T 451028
|| || || || || |||||||| || || || || || || | || || |
Sbjct 1742953 GGTGGAGATCATTGCCAATGACCAGGGCAACCGCACCACCCC--CA--GCTATGTGGCCT 1743008
Query 451029 TTACGGATTCAGAAAGACTTTTAGGGCAAGCTGCTAAATCAATGGTAAATTCAAATGCCA 451088
| |||||| ||||| | ||| | ||| | || || ||| |||| ||| |
Sbjct 1743009 TCACGGATACAGAACGGCTTATTGGGGATGCAGCCAAAAACCAGGTAGCCATGAATCCTC 1743068
Query 451089 AAAACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTAC 451148
| ||||| || | |||||| |||||| | |||||| | | | | ||||| | ||| |
Sbjct 1743069 AGAACACTGTCTTTGATGCCAAACGTCTGATTGGCAGGAAATTTAATGATCCTGTTGTGC 1743128
Query 451149 AAAAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTC 451208
| ||| | ||| | | ||| | | || | ||| || ||| |||||| | | |
Sbjct 1743129 AGTCAGATATGAAACTTTGGCCTTTTCAAGTGATCAATGAAGGAGGCAAGCCCAAGGTGC 1743188
Query 451209 AAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTC 451268
|| |||||||| || | ||| |||| |||||||||||||| || |||||
Sbjct 1743189 TGGTGTCCTATAAAGGGGAGAAAAAAGCTTTCTACCCTGAAGAAATTTCTTCAATGGTAT 1743248
Query 451269 TTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTT-ACTGATGCAGTA 451327
| ||||| ||||| ||||| ||||| | | | || | || | | || |||| ||
Sbjct 1743249 TGACTAAGATGAAGGAAACTGCAGAGGCTTTTTTAGGC-CACCTGATCACCAATGCTGTG 1743307
Query 451328 ATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACAT 451387
|| ||||| || || ||||||||||| | ||||| || || || || ||||||||
Sbjct 1743308 ATCACTGTACCGGCCTATTTCAATGACTCTCAACGCCAGGCCACCAAGGATGCAGGTGTG 1743367
Query 451388 ATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATAT 451447
||||| || | ||||| || |||| || |||||||| ||||| ||||| | || |||
Sbjct 1743368 ATTGCAGGACTCAATGTGCTAAGAATCATCAATGAACCCACAGCTGCTGCCATTGCGTAT 1743427
Query 451448 GGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGA 451507
|| ||| || | || | ||| | || | | | |||||||| ||||||
Sbjct 1743428 GGCTTAGATAAGGC---AGGTCAGGGAGAGCGACATGTACTCATCTTTGATTTGGGTGGA 1743484
Query 451508 GGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACC 451567
|| || |||| || | || | || || |||||| | |||||||||||||| ||
Sbjct 1743485 GGCACATTTGATGTATCCATCCTGACCATAGATGATGGGATTTTTGAAGTAAAGGCTACA 1743544
Query 451568 AATGGTGATACTCATCTAGGAGGTGAAGA 451596
||| || || || ||||| || || ||
Sbjct 1743545 GCTGGGGACACCCACCTAGGTGGAGAGGA 1743573
>seq557
Length=306283
Score = 163 bits (180), Expect = 1e-34
Identities = 268/380 (71%), Gaps = 10/380 (3%)
Strand=Plus/Plus
Query 451227 AAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAA 451286
||||||| || |||||||| |||||||| || |||| |||| |||||||||||||| |
Sbjct 61150 AAACTAAGACATTTGCTCCAGAAGAAATCTCTGCTATTATTCTCACTAAAATGAAAGAGA 61209
Query 451287 CAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATT 451346
| || || ||| | || ||||| ||||||| ||||||| || || | ||
Sbjct 61210 CTGCTGAGGCTTATTTGGGAAAGAAGGTTACCCATGCAGTTGTTACTGTACCGGCCTGTT 61269
Query 451347 TCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTC 451406
| |||||||| || | |||| |||| |||||||| ||| ||||||||| | ||||||
Sbjct 61270 TTAATGATGCCCAGCAGCAACCAACCAAAGATGCTGGAACTATTGCTGGCCTGAATGTTA 61329
Query 451407 TTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAG 451466
| | || || ||||| ||||||||||||||| | || ||||| || ||| || | |
Sbjct 61330 TGAGGATAATCAATGAGCCTACAGCAGCTGCTATTGCTTATGGCCT-GGATAA--GAGGG 61386
Query 451467 AAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCAT-GATACTTCT 451525
| | ||| || || || | | |||||| | ||||| |||| || | || |||
Sbjct 61387 A---GGGAGAGAAGAACATCCTGATGTTTGATCTGGGTGGTGGAA-TCTTCTATGTGTCT 61442
Query 451526 GTACTTTCAATTG--AAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATC 451583
| || | |||| || || || || |||| | ||| |||||| | | ||||||||
Sbjct 61443 CTTCTCCCCATTGACAATTTGATGTCTTCCAAGTCATGGCCACCAATAGAGTTACTCATC 61502
Query 451584 TAGGAGGTGAAGATATTGAT 451603
|| || ||||| ||| ||
Sbjct 61503 GGGGTGGAGAAGACATTTAT 61522
>seq362
Length=1080710
Score = 156 bits (172), Expect = 2e-32
Identities = 261/372 (70%), Gaps = 13/372 (3%)
Strand=Plus/Plus
Query 451227 AAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAA 451286
|||||||||| |||||||| ||||||||||| ||||| |||| |||||||||||||| |
Sbjct 903933 AAACTAAAACATTTGCTCCAGAAGAAATTTCTGCTATGATTCTCACTAAAATGAAAGAGA 903992
Query 451287 CAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATT 451346
| | || ||| ||| ||||| ||||| | | |||| || | ||||
Sbjct 903993 CTGTGGAGGCTTAT-TTGTGAAGAAGGTTACCCATGCAATTGTCACTGAACCAGTCTATT 904051
Query 451347 TCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTC 451406
| |||||||| || |||||||||| |||||||| ||| ||||||||| | ||||||
Sbjct 904052 TTAATGATGC-CAGTGGCAAGCAACCAAAGATGCTGGAACTATTGCTGGCCTGAATGTTA 904110
Query 451407 TTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAG 451466
| | || || ||||| ||||||||||||||| | || ||| | || | | || | ||
Sbjct 904111 TGAGGATCATCAATGAGCCTACAGCAGCTGCTATTGCTTATTGCCT-GTATAAGAAGGAG 904169
Query 451467 AAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTG 451526
|| ||||| || ||| | | |||||| | |||| ||||| | |||
Sbjct 904170 GAAAAGAAG-----AACATTCTGATGTTTGATCTGAGTGGTGGAACCTTCCGTGTGTCTC 904224
Query 451527 TACTTTCAATTG--AAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCT 451584
| || | |||| || || || || |||| | ||| |||||| | ||||||||||
Sbjct 904225 TTCTCCCCATTGATAATTTGATGTCTTCAAAGTCATGGCCACCAATAGAGATACTCATC- 904283
Query 451585 AGGAGGTGAAGA 451596
||||||||||
Sbjct 904284 --GAGGTGAAGA 904293
Score = 150 bits (166), Expect = 7e-31
Identities = 260/372 (70%), Gaps = 13/372 (3%)
Strand=Plus/Plus
Query 451227 AAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAA 451286
|||||||||| |||||||| |||||||| || ||||| |||| |||||||||||||| |
Sbjct 312913 AAACTAAAACATTTGCTCCAGAAGAAATCTCTGCTATGATTCTCACTAAAATGAAAGAGA 312972
Query 451287 CAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATT 451346
| || || ||| ||| ||||| ||||| | ||||| || | ||||
Sbjct 312973 CTGCGGAGGCTTAT-TTGTGAAGAAGGTTACCCATGCAATTGTTACTAAACCAGTCTATT 313031
Query 451347 TCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTC 451406
| |||||||| || |||||||||| |||||||| ||| ||||||| | | ||||||
Sbjct 313032 TTAATGATGC-CAGTGGCAAGCAACCAAAGATGCTGGAACTATTGCTTGCCTGAATGTTA 313090
Query 451407 TTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAG 451466
| || || ||||| ||||||||||||||| | || ||| | || | |||| | |
Sbjct 313091 TGAAGATCATCAATGAGCCTACAGCAGCTGCTATTGCTTATTGCCTGG----ATCAGAGG 313146
Query 451467 AAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTG 451526
| ||| | || || || | || |||||| | |||| |||||| || |||
Sbjct 313147 GA--GGAATAGAAGAACATCCTGGTGTTTGATCTGAGTGGTGGAACTTTCCATGTGTCTA 313204
Query 451527 TACTTTCAATTG--AAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCT 451584
| || | |||| || || || || |||| | || |||||| | ||||||||||
Sbjct 313205 TTCTCCCCATTGACAATTTGATGTCTTCAAAGTCATAGCCACCAATAGAGATACTCATC- 313263
Query 451585 AGGAGGTGAAGA 451596
||||||||||
Sbjct 313264 --GAGGTGAAGA 313273
Score = 125 bits (138), Expect = 3e-23
Identities = 276/405 (68%), Gaps = 18/405 (4%)
Strand=Plus/Plus
Query 451196 AAGCCCTATATTCAAGTAAATTATAAAGGTG---AAACTAAAACTTTTGCTCCTGAAGAA 451252
|| || || ||||| || || | ||||| |||||||||| |||||||| | ||||
Sbjct 544999 AAACCATACATTCAGGTTGATATTGGAGGTGGGCAAACTAAAACATTTGCTCCAGGAGAA 545058
Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312
|| || ||||| |||| |||||||||||||| || | ||| | |||| || |
Sbjct 545059 ATCTCTGCTATGATTCTCACTAAAATGAAAGAGACTG-TGAAGGCT-TATTTGTGAAGAA 545116
Query 451313 -GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAAC 451371
||||| || || | ||||| || | |||| |||||||| || ||||||||||
Sbjct 545117 GGTTACCCATACAATTGTTACTTAACCAGTCTATTGAAATGATGC-CAGTGGCAAGCAAC 545175
Query 451372 TAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGC 451431
|||||||| ||| ||||||||| | | |||| | | || || ||||| |||||||
Sbjct 545176 CAAAGATGCTGGAACTATTGCTGGCCTGAGTGTTATGAGGATCATCAATGAGCCTACAGA 545235
Query 451432 AGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGT 451491
||||||| | || ||| | || | || | | | | ||| | || || || | ||
Sbjct 545236 AGCTGCTATTGCTTATTGCCTTG----ATAAGAGGGA--GGAAAAGAAGAACATCCTGGT 545289
Query 451492 ATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTG--AAGATGGGGTA 451549
||| || | |||| ||||| || ||| | || | |||| || || ||
Sbjct 545290 GTTTAATCTGAGTGGTGGAACCTTCCATGTGTCTCTTCTCCCCATTGACAATTTGATGTC 545349
Query 451550 TTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAA 451594
|| |||| | ||| |||||| | |||||||||| ||||||||
Sbjct 545350 TTCAAAGTCATGGCCACCAATAGAGATACTCATC---GAGGTGAA 545391
>seq654
Length=198565
Score = 138 bits (152), Expect = 4e-27
Identities = 181/246 (74%), Gaps = 6/246 (2%)
Strand=Plus/Minus
Query 451196 AAGCCCTATATTCAAGTAAATTATAAAGGTG---AAACTAAAACTTTTGCTCCTGAAGAA 451252
|| || || ||||| || || | ||||| ||||||| | |||||||| ||||||
Sbjct 161672 AAACCATACATTCAGGTTGATATTGGAGGTGGGCAAACTAACATATTTGCTCCAGAAGAA 161613
Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312
|| || ||||| || | |||||||||||||| || || || ||| ||||
Sbjct 161612 ATCTCTGCTATGATTTTCACTAAAATGAAAGAGACTGCTGAGGCTTAT-TTGGGAAGAAG 161554
Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372
||||| ||||||| |||||| || | ||| | |||||||| || ||||||||||
Sbjct 161553 GTTACC-ATGCAGTTGTTACTGAACCAGTCTATATTAATGATGC-CAGTGGCAAGCAACC 161496
Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432
|||||||| ||| |||||||||| | |||||| | | || || ||||| |||||||||
Sbjct 161495 AAAGATGCTGGAAATATTGCTGGCCTGAATGTTATGAGGATCATCAATGAGCCTACAGCA 161436
Query 451433 GCTGCT 451438
||||||
Sbjct 161435 GCTGCT 161430
>seq10070
Length=1232
Score = 123 bits (136), Expect = 1e-22
Identities = 272/403 (67%), Gaps = 25/403 (6%)
Strand=Plus/Plus
Query 451197 AGCCCTATATTCAAGTAAATTATAAAGGTG---AAACTAAAACTTTTGCTCCTGAAGAAA 451253
|||| || ||||| || || | ||||| ||||| | || |||||| | |||||||
Sbjct 827 AGCCATACATTCAGGTTGATATTGGAGGTGGGCAAACTTACACATTTGCTTCAGAAGAAA 886
Query 451254 TTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAG 451313
| || |||| |||| || ||||||||||| | ||| |||| |
Sbjct 887 TCTCTGCTATAATTCTCACCAAAATGAAAGAGGCT---------TAT-TTGGGAAGAAGG 936
Query 451314 TTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTA 451373
|||| | ||||| |||||| || ||||| |||||||| || | ||||||| |
Sbjct 937 TTACCCACGCAGTTGTTACTGAACCAATCTATTTTAATGATGC-CAGTTGGAAGCAACCA 995
Query 451374 AAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAG 451433
||||||| ||| ||||||||| | |||||| | |||| || ||||| ||||||||||
Sbjct 996 AAGATGCTGGAACTATTGCTGGCCTGAATGTTATGAGAATCATCAATGAGCCTACAGCAG 1055
Query 451434 CTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTAT 451493
||||| | || ||| | || ||| || | || || ||||| || || | || |
Sbjct 1056 CTGCTATTGCTTATTGCCT-GGATAAGCCGGAGGAAAAGAAG-----AACATCCTGGTGT 1109
Query 451494 TTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTG--AAGATGGGGTATT 451551
||||| | |||| ||||| || ||| | || | |||| || || || ||
Sbjct 1110 TTGATCTGAGTGGTGGAACCTTCTATGTGTCTCTTCTCCCCATTGACAATTTGATGTTTT 1169
Query 451552 TGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAA 451594
|||| | ||| |||||| | |||||||||| ||||||||
Sbjct 1170 CAAAGTCATGGCCACCAATAGAGATACTCATC---GAGGTGAA 1209
>seq1181
Length=43409
Score = 116 bits (128), Expect = 1e-20
Identities = 174/245 (71%), Gaps = 14/245 (6%)
Strand=Plus/Plus
Query 451197 AGCCCTATATTCAAGTAAATTATAAAGGTG---AAACTAAAACTTTTGCTCCTGAAGAAA 451253
|||| || ||||| || || | ||||| ||||||| || ||||||| |||||||
Sbjct 12035 AGCCATACATTCAGGTTGATATTGGAGGTGGGCAAACTAACACATTTGCTCTAGAAGAAA 12094
Query 451254 TTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAG 451313
| || |||| |||| || ||||||||||| | ||| |||| |
Sbjct 12095 TCTCTGCTATAATTCTCACCAAAATGAAAGAGGCT---------TAT-TTGGGAAGAATG 12144
Query 451314 TTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTA 451373
|||| ||||||| |||||| || | ||||| |||||||| || || ||||||| |
Sbjct 12145 TTACCCATGCAGTTGTTACTGAACCAGTCTATTTTAATGATGC-CAGTGGGAAGCAACCA 12203
Query 451374 AAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAG 451433
||||||| ||| ||||||||| | |||||| | | || || ||||| ||||||||||
Sbjct 12204 AAGATGCTGGAACTATTGCTGGCCTGAATGTTATGAGGATCATCAATGAGCCTACAGCAG 12263
Query 451434 CTGCT 451438
|||||
Sbjct 12264 CTGCT 12268
Score = 116 bits (128), Expect = 1e-20
Identities = 275/411 (67%), Gaps = 22/411 (5%)
Strand=Plus/Plus
Query 451197 AGCCCTATATTCAAGTAAATTATAAAGGTG---AAACTAAAACTTTTGCTCCTGAAGAAA 451253
|||| || ||||| || || | ||||| ||||||| || |||||||| |||||||
Sbjct 13016 AGCCATACATTCAGGTTGATATTTGAGGTGGGAAAACTAACACATTTGCTCCAGAAGAAA 13075
Query 451254 TTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAG 451313
| || |||| || | || ||||||||| | | ||| |||| |
Sbjct 13076 TCTCTGCTATAATTTTCACCAAAATGAAAAAGGCT---------TAT-TTGGGAAGAAGG 13125
Query 451314 TTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTA 451373
|||| ||||||| |||||| || | ||||| |||||||| || || ||||||| |
Sbjct 13126 TTACCCATGCAGTTGTTACTGAACCAGTGTATTTTAATGATGC-CAGTGGGAAGCAACCA 13184
Query 451374 AAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAG 451433
||||||| ||| ||||||| | | |||||| | | || || ||||| ||||||||||
Sbjct 13185 AAGATGCTGGAACTATTGCTAGCCTGAATGTTATGAGGATCATCAATGAGCCTACAGCAG 13244
Query 451434 CTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTAT 451493
||||| | || ||| | || ||| || || || ||||| || | | || |
Sbjct 13245 CTGCTATTGCTTATTGCCT-GGATAAGAGGGAGGAAAAGAAG-----AACGTCCTGGTGT 13298
Query 451494 TTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTG--AAGATGGGGTATT 451551
||||| | ||||| ||||| || ||| | || | |||| || || || ||
Sbjct 13299 TTGATCTGGGTGGTGGAACCTTCTATGTGTCTCTTCTCCCCATTGACAATTTGATGTCTT 13358
Query 451552 TGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGA 451602
|| | | | | |||||| | |||||||||| ||| | ||||| ||||
Sbjct 13359 CAAATTCATGCCCACCAATAGAGATACTCATCAAGGTGAAGAAGACTTTGA 13409
>seq291
Length=1898989
Score = 116 bits (128), Expect = 1e-20
Identities = 155/213 (73%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 451227 AAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAA 451286
||||||| || |||||||| ||| ||||||| |||| |||| |||||||| ||||| |
Sbjct 881096 AAACTAAGACCTTTGCTCCAGAATAAATTTCTGCTATAATTCTCACTAAAATAAAAGATA 881037
Query 451287 CAGCAGAACAATATATTGGTTCTCCAG-TTACTGATGCAGTAATTACTGTTCCCGCTTAT 451345
| || | ||| |||| || |||| ||||||| ||||||| | || |||
Sbjct 881036 CTGCTCACACTTAT-TTGGGAAAGAAGATTACCTATGCAGTTGTTACTGTAACGGCATAT 880978
Query 451346 TTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTT 451405
|| || ||||| || |||| ||| |||||| | ||| ||||||||| | |||||
Sbjct 880977 TTTAAAGATGCCCAGTGGCAGTCAAGCAAAGATTCTGGAACTATTGCTGGCCTGAATGTA 880918
Query 451406 CTTCGAATTATTAATGAACCTACAGCAGCTGCT 451438
| | || |||| ||| |||||||||||||||
Sbjct 880917 ATGAGGATCATTACTGAGCCTACAGCAGCTGCT 880885
>seq8380
Length=1491
Score = 113 bits (124), Expect = 2e-19
Identities = 265/396 (67%), Gaps = 22/396 (6%)
Strand=Plus/Minus
Query 451197 AGCCCTATATTCAAGTAAATTATAAAGGTG---AAACTAAAACTTTTGCTCCTGAAGAAA 451253
|||| || ||||| || || | ||||| ||||||| || ||||| | |||||||
Sbjct 565 AGCCATACATTCAGGTTGATATTGGAGGTGGGCAAACTAACACACTTGCTTCAGAAGAAA 506
Query 451254 TTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAG 451313
| || |||| |||| || ||||||||||| | ||| |||| |
Sbjct 505 TCTCTGCTATAATTCTCACCAAAATGAAAGAGGCT---------TAT-TTGGGAAGAAGG 456
Query 451314 TTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTA 451373
|||| |||| || |||||| || | ||||| |||||| | || || ||||||| |
Sbjct 455 TTACCCATGCGGTTGTTACTGAACCAGTCTATTTTAATGATAC-CAGTGGGAAGCAACCA 397
Query 451374 AAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAG 451433
||||||| ||| ||||||||| | |||||| | | || || ||||| ||||||||||
Sbjct 396 AAGATGCTGGAACTATTGCTGGCCTGAATGTTATGAGGATCATCAATGAGCCTACAGCAG 337
Query 451434 CTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTAT 451493
||||| | || ||| | || ||| || || || ||||| || || | || |
Sbjct 336 CTGCTATTGCTTATTGCCT-GGATAAGACGGAGGAAAAGAAG-----AACATCCTGGTGT 283
Query 451494 TTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTG--AAGATGGGGTATT 451551
||||| | ||||| | ||| || ||| | || | ||| || || || ||
Sbjct 282 TTGATCTGGGTGGTGAAACCTTCTATGTGTCTCTTCTCCCCGTTGACAATTTGATGTTTT 223
Query 451552 TGAAGTAAAGGCAACCAATGGTGATACTCATCTAGG 451587
|||| | ||| || ||| | ||||||||||||||
Sbjct 222 CAAAGTCATGGCCACAAATAGAGATACTCATCTAGG 187
>seq487
Length=469708
Score = 111 bits (122), Expect = 6e-19
Identities = 152/209 (73%), Gaps = 4/209 (2%)
Strand=Plus/Minus
Query 451233 AAACTT--TTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGC 451290
|||||| ||||||| |||||||||| |||| || | |||| ||||||||| || ||
Sbjct 325202 AAACTTAGTTGCTCCATAAGAAATTTCTGGTATGATTTTCACTATAATGAAAGAGACTGC 325143
Query 451291 AGAACAATATATTGGTTCTCCAGTT-ACTGATGCAGTAATTACTGTTCCCGCTTATTTCA 451349
|| ||| |||| |||| || ||||||| |||| || || || ||||| |
Sbjct 325142 TGAGGCTTAT-TTGGGAAAGAAGTTTACGCATGCAGTTGTTACAGTACCAGCCTATTTTA 325084
Query 451350 ATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTC 451409
|||||| || | |||||||| |||||||| || |||||||| | || ||| |
Sbjct 325083 ATGATGGCCAGCAACAAGCAACCAAAGATGCTAGAACTATTGCTGTCCTGAAAGTTATGA 325024
Query 451410 GAATTATTAATGAACCTACAGCAGCTGCT 451438
|||| || ||||| |||||||||||| ||
Sbjct 325023 GAATCATCAATGAGCCTACAGCAGCTCCT 324995
>seq455
Length=570085
Score = 105 bits (116), Expect = 3e-17
Identities = 146/203 (72%), Gaps = 5/203 (2%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | |||||| | ||||| || | || || ||||||||||| | |||||| | |
Sbjct 193464 ATGCAGATTTTCAT-AAAACCCTTATGGGGAAGACTATTACTCTCAAGGTTGAACCTT-- 193520
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| || ||| ||| ||| || || || |||||||||||||||||||||||||
Sbjct 193521 --TACTATAGAAAATATAAAAGCCAAGATCCAGAATAAGGAAGGAATTCCTCCTGATCAG 193578
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
||| || | || || | || || ||||| ||||||||| | || ||| | || || ||
Sbjct 193579 CAAAGTCTGATCTTTGCTGGTAAGCAACTAGAAGATGGACGTACCTTGTCTGACTACAAC 193638
Query 391230 ATTGATAAGGATGCAACACTTCA 391252
||| | ||||| | || |||||
Sbjct 193639 ATTTAGAAGGAGTCCACCCTTCA 193661
>seq11036
Length=1096
Score = 102 bits (112), Expect = 3e-16
Identities = 91/113 (81%), Gaps = 1/113 (1%)
Strand=Plus/Plus
Query 451340 GCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTA 451399
|| ||||| |||||||| || |||||||||| |||||||| ||| ||||||||| |
Sbjct 3 GCCTATTTTAATGATGC-CACTGGCAAGCAACCAAAGATGCTGGAACTATTGCTGGCCTG 61
Query 451400 AATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACT 451452
|||||| | |||| || ||||| ||||||||||||||| | || ||||| ||
Sbjct 62 AATGTTATGAGAATCATCAATGAGCCTACAGCAGCTGCTATTGCTTATGGCCT 114
>seq73
Length=8706776
Score = 100 bits (110), Expect = 1e-15
Identities = 145/203 (71%), Gaps = 5/203 (2%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | |||||| | ||||| || || || || ||||||| || | |||||| | ||
Sbjct 2651547 ATGCAGATTTTCATAAAAACCCTTACGGGGAAGACTATTAG-CTCAAAGTTGAACCCTCG 2651605
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | || ||| ||| ||| || || || ||||| |||||||||||||||||||||
Sbjct 2651606 GACACTATAGAAAATATAAAAGCCAAGATCCAGGATAACGAAGGAATTCCTCCTGATCAA 2651665
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
| | | || || | | || || ||||| |||||| || | ||||| || || ||
Sbjct 2651666 CCAAGATTGATCGTTGCTGGTAAGCAACTGGAAGATAGACGTACTTT----GACTACAAC 2651721
Query 391230 ATTGATAAGGATGCAACACTTCA 391252
||||| ||||| | || |||||
Sbjct 2651722 ATTGAGAAGGAGTCCACCCTTCA 2651744
>seq19
Length=19581918
Score = 96.9 bits (106), Expect = 1e-14
Identities = 89/113 (79%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372
||||| ||||||| ||||||| || || ||||| |||||||| || |||||||||||
Sbjct 13351170 GTTACCCATGCAGTTGTTACTGTACCAGCCTATTTTAATGATGCCCAGCGGCAAGCAACC 13351111
Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACC 451425
|||||||| ||| ||||||||| | |||||| | | || || ||||| ||
Sbjct 13351110 AAAGATGCTGGAACTATTGCTGGCCTGAATGTTATGAGGATCATCAATGAGCC 13351058
>seq6
Length=30479472
Score = 93.3 bits (102), Expect = 2e-13
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | |||||| | ||||| || || || || ||| |||| || || | |||| | ||
Sbjct 3763529 ATGCAGATTTTCATAAAAACCCTTACAGGGAAGACTGTTACGCTGGAGGCTGAACCCTCG 3763588
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | | ||| | ||| || || || ||||||||||||||||||||||||||
Sbjct 3763589 GACACTACAGAAAATGCAAAAGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 3763648
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
||| | | || || | || || ||||| ||||||||| | |||||| | || | |
Sbjct 3763649 CAAAGACTGATCTTTGCTGGTAAGCAACTGGAAGATGGATGTACTTTGTCTGACCACAGC 3763708
Query 391230 ATTGATAAGGA 391240
||| | |||||
Sbjct 3763709 ATTCAGAAGGA 3763719
>seq26
Length=15501076
Score = 91.5 bits (100), Expect = 6e-13
Identities = 135/191 (71%), Gaps = 3/191 (2%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | |||||||| ||||| || || | || |||||||| | || |||||| ||
Sbjct 10002039 ATGCAGATTTTCGTAAAAACCCTTACAGAGAAGACTATTACAATGGAGGTTGAACCA--- 10001983
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| || ||| | | || || || || ||||||||||||||||||||| ||||
Sbjct 10001982 GATACTATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTAATCAT 10001923
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
||| | |||| || | | || ||||| |||||| || | ||| | | || || ||
Sbjct 10001922 CAAAGACTAATCTTTGCTGATAAGCAACTGGAAGATTGACGTACTGAGTCTGACTACAAC 10001863
Query 391230 ATTGATAAGGA 391240
||| | |||||
Sbjct 10001862 ATTCAGAAGGA 10001852
>seq449
Length=598082
Score = 84.2 bits (92), Expect = 9e-11
Identities = 174/256 (68%), Gaps = 15/256 (6%)
Strand=Plus/Plus
Query 451343 TATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAAT 451402
|||| |||||||| || |||||||||| |||||||| ||| ||||||||| | | |
Sbjct 96052 TATTGAAATGATGC-CAGTGGCAAGCAACGAAAGATGCTGGAACTATTGCTGGCCTGAGT 96110
Query 451403 GTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCA 451462
||| | || || ||| | ||||||||||||||| | || ||| | || | |
Sbjct 96111 GTTATGAAGATCATCAATAAGCCTACAGCAGCTGCTATTGCTTATTGCCT-------TGA 96163
Query 451463 AAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACT 451522
|||| ||| |||| || || | || |||||| | || | ||||| ||
Sbjct 96164 TAAGAGGGAGA--AAAAGAACATCCTGGTGTTTGATCTGAGTAGTGGAACCTTCCATGTG 96221
Query 451523 TCTGTACTTTCAATTG--AAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTC 451580
||| | || | |||| || || || || |||| | ||| |||||| | |||||||
Sbjct 96222 TCTCTTCTCCCCATTGACAATTTGATGTCTTCAAAGTCATGGCCACCAATAGAGATACTC 96281
Query 451581 ATCTAGGAGGTGAAGA 451596
||| ||||||||||
Sbjct 96282 ATC---GAGGTGAAGA 96294
>seq30
Length=14751797
Score = 84.2 bits (92), Expect = 9e-11
Identities = 134/191 (70%), Gaps = 1/191 (1%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | |||||| ||||||| || | ||| || || || | ||||| |||||| ||
Sbjct 13753570 ATGCAGATTTTCATTAAAACCCTTATTGGGAAGACCATCATGCTTGAGGTTGAACCACTG 13753629
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| || ||| | | ||| || || ||||||||||| |||||||||| ||||
Sbjct 13753630 GATACTATAGAAAATGTAAAAGCCAAGATCTAAGATAAGGAAAGAATTCCTCCCAATCAG 13753689
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
||| | |||| || | || || ||| | |||||||| | | ||| | || || ||
Sbjct 13753690 CAAAGACTAATCTTTGCTGGTAAGCAAATGGAAGATGGGTGTA-TTTATCTGACTACAAC 13753748
Query 391230 ATTGATAAGGA 391240
||| | |||||
Sbjct 13753749 ATTCAGAAGGA 13753759
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975402406686164
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |