Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ictidomys_20tridecemlineatus_20[refseq_20GCF_5F000236235.1_202011- 11-29] 12,483 sequences; 2,478,393,770 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq259 181 4e-40 seq557 163 1e-34 seq362 156 2e-32 seq654 138 4e-27 seq10070 123 1e-22 seq1181 116 1e-20 seq291 116 1e-20 seq8380 113 2e-19 seq487 111 6e-19 seq455 105 3e-17 seq11036 102 3e-16 seq73 100 1e-15 seq19 96.9 1e-14 seq6 93.3 2e-13 seq26 91.5 6e-13 seq449 84.2 9e-11 seq30 84.2 9e-11 >seq259 Length=2316233 Score = 181 bits (200), Expect = 4e-40 Identities = 457/689 (66%), Gaps = 13/689 (2%) Strand=Plus/Plus Query 450913 AGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAA 450972 ||| || || || || | || ||||||| ||| |||||||| || | ||| |||| || Sbjct 1742893 AGCCATAGGCATCGACTTGGGTACCACCTATTCTTGTGTAGGGGTGTTCCAGCATGGCAA 1742952 Query 450973 TGTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGT----T 451028 || || || || || |||||||| || || || || || || | || || | Sbjct 1742953 GGTGGAGATCATTGCCAATGACCAGGGCAACCGCACCACCCC--CA--GCTATGTGGCCT 1743008 Query 451029 TTACGGATTCAGAAAGACTTTTAGGGCAAGCTGCTAAATCAATGGTAAATTCAAATGCCA 451088 | |||||| ||||| | ||| | ||| | || || ||| |||| ||| | Sbjct 1743009 TCACGGATACAGAACGGCTTATTGGGGATGCAGCCAAAAACCAGGTAGCCATGAATCCTC 1743068 Query 451089 AAAACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTAC 451148 | ||||| || | |||||| |||||| | |||||| | | | | ||||| | ||| | Sbjct 1743069 AGAACACTGTCTTTGATGCCAAACGTCTGATTGGCAGGAAATTTAATGATCCTGTTGTGC 1743128 Query 451149 AAAAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTC 451208 | ||| | ||| | | ||| | | || | ||| || ||| |||||| | | | Sbjct 1743129 AGTCAGATATGAAACTTTGGCCTTTTCAAGTGATCAATGAAGGAGGCAAGCCCAAGGTGC 1743188 Query 451209 AAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTC 451268 || |||||||| || | ||| |||| |||||||||||||| || ||||| Sbjct 1743189 TGGTGTCCTATAAAGGGGAGAAAAAAGCTTTCTACCCTGAAGAAATTTCTTCAATGGTAT 1743248 Query 451269 TTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTT-ACTGATGCAGTA 451327 | ||||| ||||| ||||| ||||| | | | || | || | | || |||| || Sbjct 1743249 TGACTAAGATGAAGGAAACTGCAGAGGCTTTTTTAGGC-CACCTGATCACCAATGCTGTG 1743307 Query 451328 ATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACAT 451387 || ||||| || || ||||||||||| | ||||| || || || || |||||||| Sbjct 1743308 ATCACTGTACCGGCCTATTTCAATGACTCTCAACGCCAGGCCACCAAGGATGCAGGTGTG 1743367 Query 451388 ATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATAT 451447 ||||| || | ||||| || |||| || |||||||| ||||| ||||| | || ||| Sbjct 1743368 ATTGCAGGACTCAATGTGCTAAGAATCATCAATGAACCCACAGCTGCTGCCATTGCGTAT 1743427 Query 451448 GGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGA 451507 || ||| || | || | ||| | || | | | |||||||| |||||| Sbjct 1743428 GGCTTAGATAAGGC---AGGTCAGGGAGAGCGACATGTACTCATCTTTGATTTGGGTGGA 1743484 Query 451508 GGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACC 451567 || || |||| || | || | || || |||||| | |||||||||||||| || Sbjct 1743485 GGCACATTTGATGTATCCATCCTGACCATAGATGATGGGATTTTTGAAGTAAAGGCTACA 1743544 Query 451568 AATGGTGATACTCATCTAGGAGGTGAAGA 451596 ||| || || || ||||| || || || Sbjct 1743545 GCTGGGGACACCCACCTAGGTGGAGAGGA 1743573 >seq557 Length=306283 Score = 163 bits (180), Expect = 1e-34 Identities = 268/380 (71%), Gaps = 10/380 (3%) Strand=Plus/Plus Query 451227 AAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAA 451286 ||||||| || |||||||| |||||||| || |||| |||| |||||||||||||| | Sbjct 61150 AAACTAAGACATTTGCTCCAGAAGAAATCTCTGCTATTATTCTCACTAAAATGAAAGAGA 61209 Query 451287 CAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATT 451346 | || || ||| | || ||||| ||||||| ||||||| || || | || Sbjct 61210 CTGCTGAGGCTTATTTGGGAAAGAAGGTTACCCATGCAGTTGTTACTGTACCGGCCTGTT 61269 Query 451347 TCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTC 451406 | |||||||| || | |||| |||| |||||||| ||| ||||||||| | |||||| Sbjct 61270 TTAATGATGCCCAGCAGCAACCAACCAAAGATGCTGGAACTATTGCTGGCCTGAATGTTA 61329 Query 451407 TTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAG 451466 | | || || ||||| ||||||||||||||| | || ||||| || ||| || | | Sbjct 61330 TGAGGATAATCAATGAGCCTACAGCAGCTGCTATTGCTTATGGCCT-GGATAA--GAGGG 61386 Query 451467 AAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCAT-GATACTTCT 451525 | | ||| || || || | | |||||| | ||||| |||| || | || ||| Sbjct 61387 A---GGGAGAGAAGAACATCCTGATGTTTGATCTGGGTGGTGGAA-TCTTCTATGTGTCT 61442 Query 451526 GTACTTTCAATTG--AAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATC 451583 | || | |||| || || || || |||| | ||| |||||| | | |||||||| Sbjct 61443 CTTCTCCCCATTGACAATTTGATGTCTTCCAAGTCATGGCCACCAATAGAGTTACTCATC 61502 Query 451584 TAGGAGGTGAAGATATTGAT 451603 || || ||||| ||| || Sbjct 61503 GGGGTGGAGAAGACATTTAT 61522 >seq362 Length=1080710 Score = 156 bits (172), Expect = 2e-32 Identities = 261/372 (70%), Gaps = 13/372 (3%) Strand=Plus/Plus Query 451227 AAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAA 451286 |||||||||| |||||||| ||||||||||| ||||| |||| |||||||||||||| | Sbjct 903933 AAACTAAAACATTTGCTCCAGAAGAAATTTCTGCTATGATTCTCACTAAAATGAAAGAGA 903992 Query 451287 CAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATT 451346 | | || ||| ||| ||||| ||||| | | |||| || | |||| Sbjct 903993 CTGTGGAGGCTTAT-TTGTGAAGAAGGTTACCCATGCAATTGTCACTGAACCAGTCTATT 904051 Query 451347 TCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTC 451406 | |||||||| || |||||||||| |||||||| ||| ||||||||| | |||||| Sbjct 904052 TTAATGATGC-CAGTGGCAAGCAACCAAAGATGCTGGAACTATTGCTGGCCTGAATGTTA 904110 Query 451407 TTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAG 451466 | | || || ||||| ||||||||||||||| | || ||| | || | | || | || Sbjct 904111 TGAGGATCATCAATGAGCCTACAGCAGCTGCTATTGCTTATTGCCT-GTATAAGAAGGAG 904169 Query 451467 AAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTG 451526 || ||||| || ||| | | |||||| | |||| ||||| | ||| Sbjct 904170 GAAAAGAAG-----AACATTCTGATGTTTGATCTGAGTGGTGGAACCTTCCGTGTGTCTC 904224 Query 451527 TACTTTCAATTG--AAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCT 451584 | || | |||| || || || || |||| | ||| |||||| | |||||||||| Sbjct 904225 TTCTCCCCATTGATAATTTGATGTCTTCAAAGTCATGGCCACCAATAGAGATACTCATC- 904283 Query 451585 AGGAGGTGAAGA 451596 |||||||||| Sbjct 904284 --GAGGTGAAGA 904293 Score = 150 bits (166), Expect = 7e-31 Identities = 260/372 (70%), Gaps = 13/372 (3%) Strand=Plus/Plus Query 451227 AAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAA 451286 |||||||||| |||||||| |||||||| || ||||| |||| |||||||||||||| | Sbjct 312913 AAACTAAAACATTTGCTCCAGAAGAAATCTCTGCTATGATTCTCACTAAAATGAAAGAGA 312972 Query 451287 CAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATT 451346 | || || ||| ||| ||||| ||||| | ||||| || | |||| Sbjct 312973 CTGCGGAGGCTTAT-TTGTGAAGAAGGTTACCCATGCAATTGTTACTAAACCAGTCTATT 313031 Query 451347 TCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTC 451406 | |||||||| || |||||||||| |||||||| ||| ||||||| | | |||||| Sbjct 313032 TTAATGATGC-CAGTGGCAAGCAACCAAAGATGCTGGAACTATTGCTTGCCTGAATGTTA 313090 Query 451407 TTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAG 451466 | || || ||||| ||||||||||||||| | || ||| | || | |||| | | Sbjct 313091 TGAAGATCATCAATGAGCCTACAGCAGCTGCTATTGCTTATTGCCTGG----ATCAGAGG 313146 Query 451467 AAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTG 451526 | ||| | || || || | || |||||| | |||| |||||| || ||| Sbjct 313147 GA--GGAATAGAAGAACATCCTGGTGTTTGATCTGAGTGGTGGAACTTTCCATGTGTCTA 313204 Query 451527 TACTTTCAATTG--AAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCT 451584 | || | |||| || || || || |||| | || |||||| | |||||||||| Sbjct 313205 TTCTCCCCATTGACAATTTGATGTCTTCAAAGTCATAGCCACCAATAGAGATACTCATC- 313263 Query 451585 AGGAGGTGAAGA 451596 |||||||||| Sbjct 313264 --GAGGTGAAGA 313273 Score = 125 bits (138), Expect = 3e-23 Identities = 276/405 (68%), Gaps = 18/405 (4%) Strand=Plus/Plus Query 451196 AAGCCCTATATTCAAGTAAATTATAAAGGTG---AAACTAAAACTTTTGCTCCTGAAGAA 451252 || || || ||||| || || | ||||| |||||||||| |||||||| | |||| Sbjct 544999 AAACCATACATTCAGGTTGATATTGGAGGTGGGCAAACTAAAACATTTGCTCCAGGAGAA 545058 Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312 || || ||||| |||| |||||||||||||| || | ||| | |||| || | Sbjct 545059 ATCTCTGCTATGATTCTCACTAAAATGAAAGAGACTG-TGAAGGCT-TATTTGTGAAGAA 545116 Query 451313 -GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAAC 451371 ||||| || || | ||||| || | |||| |||||||| || |||||||||| Sbjct 545117 GGTTACCCATACAATTGTTACTTAACCAGTCTATTGAAATGATGC-CAGTGGCAAGCAAC 545175 Query 451372 TAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGC 451431 |||||||| ||| ||||||||| | | |||| | | || || ||||| ||||||| Sbjct 545176 CAAAGATGCTGGAACTATTGCTGGCCTGAGTGTTATGAGGATCATCAATGAGCCTACAGA 545235 Query 451432 AGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGT 451491 ||||||| | || ||| | || | || | | | | ||| | || || || | || Sbjct 545236 AGCTGCTATTGCTTATTGCCTTG----ATAAGAGGGA--GGAAAAGAAGAACATCCTGGT 545289 Query 451492 ATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTG--AAGATGGGGTA 451549 ||| || | |||| ||||| || ||| | || | |||| || || || Sbjct 545290 GTTTAATCTGAGTGGTGGAACCTTCCATGTGTCTCTTCTCCCCATTGACAATTTGATGTC 545349 Query 451550 TTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAA 451594 || |||| | ||| |||||| | |||||||||| |||||||| Sbjct 545350 TTCAAAGTCATGGCCACCAATAGAGATACTCATC---GAGGTGAA 545391 >seq654 Length=198565 Score = 138 bits (152), Expect = 4e-27 Identities = 181/246 (74%), Gaps = 6/246 (2%) Strand=Plus/Minus Query 451196 AAGCCCTATATTCAAGTAAATTATAAAGGTG---AAACTAAAACTTTTGCTCCTGAAGAA 451252 || || || ||||| || || | ||||| ||||||| | |||||||| |||||| Sbjct 161672 AAACCATACATTCAGGTTGATATTGGAGGTGGGCAAACTAACATATTTGCTCCAGAAGAA 161613 Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312 || || ||||| || | |||||||||||||| || || || ||| |||| Sbjct 161612 ATCTCTGCTATGATTTTCACTAAAATGAAAGAGACTGCTGAGGCTTAT-TTGGGAAGAAG 161554 Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 ||||| ||||||| |||||| || | ||| | |||||||| || |||||||||| Sbjct 161553 GTTACC-ATGCAGTTGTTACTGAACCAGTCTATATTAATGATGC-CAGTGGCAAGCAACC 161496 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 |||||||| ||| |||||||||| | |||||| | | || || ||||| ||||||||| Sbjct 161495 AAAGATGCTGGAAATATTGCTGGCCTGAATGTTATGAGGATCATCAATGAGCCTACAGCA 161436 Query 451433 GCTGCT 451438 |||||| Sbjct 161435 GCTGCT 161430 >seq10070 Length=1232 Score = 123 bits (136), Expect = 1e-22 Identities = 272/403 (67%), Gaps = 25/403 (6%) Strand=Plus/Plus Query 451197 AGCCCTATATTCAAGTAAATTATAAAGGTG---AAACTAAAACTTTTGCTCCTGAAGAAA 451253 |||| || ||||| || || | ||||| ||||| | || |||||| | ||||||| Sbjct 827 AGCCATACATTCAGGTTGATATTGGAGGTGGGCAAACTTACACATTTGCTTCAGAAGAAA 886 Query 451254 TTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAG 451313 | || |||| |||| || ||||||||||| | ||| |||| | Sbjct 887 TCTCTGCTATAATTCTCACCAAAATGAAAGAGGCT---------TAT-TTGGGAAGAAGG 936 Query 451314 TTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTA 451373 |||| | ||||| |||||| || ||||| |||||||| || | ||||||| | Sbjct 937 TTACCCACGCAGTTGTTACTGAACCAATCTATTTTAATGATGC-CAGTTGGAAGCAACCA 995 Query 451374 AAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAG 451433 ||||||| ||| ||||||||| | |||||| | |||| || ||||| |||||||||| Sbjct 996 AAGATGCTGGAACTATTGCTGGCCTGAATGTTATGAGAATCATCAATGAGCCTACAGCAG 1055 Query 451434 CTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTAT 451493 ||||| | || ||| | || ||| || | || || ||||| || || | || | Sbjct 1056 CTGCTATTGCTTATTGCCT-GGATAAGCCGGAGGAAAAGAAG-----AACATCCTGGTGT 1109 Query 451494 TTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTG--AAGATGGGGTATT 451551 ||||| | |||| ||||| || ||| | || | |||| || || || || Sbjct 1110 TTGATCTGAGTGGTGGAACCTTCTATGTGTCTCTTCTCCCCATTGACAATTTGATGTTTT 1169 Query 451552 TGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAA 451594 |||| | ||| |||||| | |||||||||| |||||||| Sbjct 1170 CAAAGTCATGGCCACCAATAGAGATACTCATC---GAGGTGAA 1209 >seq1181 Length=43409 Score = 116 bits (128), Expect = 1e-20 Identities = 174/245 (71%), Gaps = 14/245 (6%) Strand=Plus/Plus Query 451197 AGCCCTATATTCAAGTAAATTATAAAGGTG---AAACTAAAACTTTTGCTCCTGAAGAAA 451253 |||| || ||||| || || | ||||| ||||||| || ||||||| ||||||| Sbjct 12035 AGCCATACATTCAGGTTGATATTGGAGGTGGGCAAACTAACACATTTGCTCTAGAAGAAA 12094 Query 451254 TTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAG 451313 | || |||| |||| || ||||||||||| | ||| |||| | Sbjct 12095 TCTCTGCTATAATTCTCACCAAAATGAAAGAGGCT---------TAT-TTGGGAAGAATG 12144 Query 451314 TTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTA 451373 |||| ||||||| |||||| || | ||||| |||||||| || || ||||||| | Sbjct 12145 TTACCCATGCAGTTGTTACTGAACCAGTCTATTTTAATGATGC-CAGTGGGAAGCAACCA 12203 Query 451374 AAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAG 451433 ||||||| ||| ||||||||| | |||||| | | || || ||||| |||||||||| Sbjct 12204 AAGATGCTGGAACTATTGCTGGCCTGAATGTTATGAGGATCATCAATGAGCCTACAGCAG 12263 Query 451434 CTGCT 451438 ||||| Sbjct 12264 CTGCT 12268 Score = 116 bits (128), Expect = 1e-20 Identities = 275/411 (67%), Gaps = 22/411 (5%) Strand=Plus/Plus Query 451197 AGCCCTATATTCAAGTAAATTATAAAGGTG---AAACTAAAACTTTTGCTCCTGAAGAAA 451253 |||| || ||||| || || | ||||| ||||||| || |||||||| ||||||| Sbjct 13016 AGCCATACATTCAGGTTGATATTTGAGGTGGGAAAACTAACACATTTGCTCCAGAAGAAA 13075 Query 451254 TTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAG 451313 | || |||| || | || ||||||||| | | ||| |||| | Sbjct 13076 TCTCTGCTATAATTTTCACCAAAATGAAAAAGGCT---------TAT-TTGGGAAGAAGG 13125 Query 451314 TTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTA 451373 |||| ||||||| |||||| || | ||||| |||||||| || || ||||||| | Sbjct 13126 TTACCCATGCAGTTGTTACTGAACCAGTGTATTTTAATGATGC-CAGTGGGAAGCAACCA 13184 Query 451374 AAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAG 451433 ||||||| ||| ||||||| | | |||||| | | || || ||||| |||||||||| Sbjct 13185 AAGATGCTGGAACTATTGCTAGCCTGAATGTTATGAGGATCATCAATGAGCCTACAGCAG 13244 Query 451434 CTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTAT 451493 ||||| | || ||| | || ||| || || || ||||| || | | || | Sbjct 13245 CTGCTATTGCTTATTGCCT-GGATAAGAGGGAGGAAAAGAAG-----AACGTCCTGGTGT 13298 Query 451494 TTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTG--AAGATGGGGTATT 451551 ||||| | ||||| ||||| || ||| | || | |||| || || || || Sbjct 13299 TTGATCTGGGTGGTGGAACCTTCTATGTGTCTCTTCTCCCCATTGACAATTTGATGTCTT 13358 Query 451552 TGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGA 451602 || | | | | |||||| | |||||||||| ||| | ||||| |||| Sbjct 13359 CAAATTCATGCCCACCAATAGAGATACTCATCAAGGTGAAGAAGACTTTGA 13409 >seq291 Length=1898989 Score = 116 bits (128), Expect = 1e-20 Identities = 155/213 (73%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 451227 AAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAA 451286 ||||||| || |||||||| ||| ||||||| |||| |||| |||||||| ||||| | Sbjct 881096 AAACTAAGACCTTTGCTCCAGAATAAATTTCTGCTATAATTCTCACTAAAATAAAAGATA 881037 Query 451287 CAGCAGAACAATATATTGGTTCTCCAG-TTACTGATGCAGTAATTACTGTTCCCGCTTAT 451345 | || | ||| |||| || |||| ||||||| ||||||| | || ||| Sbjct 881036 CTGCTCACACTTAT-TTGGGAAAGAAGATTACCTATGCAGTTGTTACTGTAACGGCATAT 880978 Query 451346 TTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTT 451405 || || ||||| || |||| ||| |||||| | ||| ||||||||| | ||||| Sbjct 880977 TTTAAAGATGCCCAGTGGCAGTCAAGCAAAGATTCTGGAACTATTGCTGGCCTGAATGTA 880918 Query 451406 CTTCGAATTATTAATGAACCTACAGCAGCTGCT 451438 | | || |||| ||| ||||||||||||||| Sbjct 880917 ATGAGGATCATTACTGAGCCTACAGCAGCTGCT 880885 >seq8380 Length=1491 Score = 113 bits (124), Expect = 2e-19 Identities = 265/396 (67%), Gaps = 22/396 (6%) Strand=Plus/Minus Query 451197 AGCCCTATATTCAAGTAAATTATAAAGGTG---AAACTAAAACTTTTGCTCCTGAAGAAA 451253 |||| || ||||| || || | ||||| ||||||| || ||||| | ||||||| Sbjct 565 AGCCATACATTCAGGTTGATATTGGAGGTGGGCAAACTAACACACTTGCTTCAGAAGAAA 506 Query 451254 TTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAG 451313 | || |||| |||| || ||||||||||| | ||| |||| | Sbjct 505 TCTCTGCTATAATTCTCACCAAAATGAAAGAGGCT---------TAT-TTGGGAAGAAGG 456 Query 451314 TTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTA 451373 |||| |||| || |||||| || | ||||| |||||| | || || ||||||| | Sbjct 455 TTACCCATGCGGTTGTTACTGAACCAGTCTATTTTAATGATAC-CAGTGGGAAGCAACCA 397 Query 451374 AAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAG 451433 ||||||| ||| ||||||||| | |||||| | | || || ||||| |||||||||| Sbjct 396 AAGATGCTGGAACTATTGCTGGCCTGAATGTTATGAGGATCATCAATGAGCCTACAGCAG 337 Query 451434 CTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTAT 451493 ||||| | || ||| | || ||| || || || ||||| || || | || | Sbjct 336 CTGCTATTGCTTATTGCCT-GGATAAGACGGAGGAAAAGAAG-----AACATCCTGGTGT 283 Query 451494 TTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTG--AAGATGGGGTATT 451551 ||||| | ||||| | ||| || ||| | || | ||| || || || || Sbjct 282 TTGATCTGGGTGGTGAAACCTTCTATGTGTCTCTTCTCCCCGTTGACAATTTGATGTTTT 223 Query 451552 TGAAGTAAAGGCAACCAATGGTGATACTCATCTAGG 451587 |||| | ||| || ||| | |||||||||||||| Sbjct 222 CAAAGTCATGGCCACAAATAGAGATACTCATCTAGG 187 >seq487 Length=469708 Score = 111 bits (122), Expect = 6e-19 Identities = 152/209 (73%), Gaps = 4/209 (2%) Strand=Plus/Minus Query 451233 AAACTT--TTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGC 451290 |||||| ||||||| |||||||||| |||| || | |||| ||||||||| || || Sbjct 325202 AAACTTAGTTGCTCCATAAGAAATTTCTGGTATGATTTTCACTATAATGAAAGAGACTGC 325143 Query 451291 AGAACAATATATTGGTTCTCCAGTT-ACTGATGCAGTAATTACTGTTCCCGCTTATTTCA 451349 || ||| |||| |||| || ||||||| |||| || || || ||||| | Sbjct 325142 TGAGGCTTAT-TTGGGAAAGAAGTTTACGCATGCAGTTGTTACAGTACCAGCCTATTTTA 325084 Query 451350 ATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTC 451409 |||||| || | |||||||| |||||||| || |||||||| | || ||| | Sbjct 325083 ATGATGGCCAGCAACAAGCAACCAAAGATGCTAGAACTATTGCTGTCCTGAAAGTTATGA 325024 Query 451410 GAATTATTAATGAACCTACAGCAGCTGCT 451438 |||| || ||||| |||||||||||| || Sbjct 325023 GAATCATCAATGAGCCTACAGCAGCTCCT 324995 >seq455 Length=570085 Score = 105 bits (116), Expect = 3e-17 Identities = 146/203 (72%), Gaps = 5/203 (2%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||| | ||||| || | || || ||||||||||| | |||||| | | Sbjct 193464 ATGCAGATTTTCAT-AAAACCCTTATGGGGAAGACTATTACTCTCAAGGTTGAACCTT-- 193520 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || || ||| ||| ||| || || || ||||||||||||||||||||||||| Sbjct 193521 --TACTATAGAAAATATAAAAGCCAAGATCCAGAATAAGGAAGGAATTCCTCCTGATCAG 193578 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| || | || || | || || ||||| ||||||||| | || ||| | || || || Sbjct 193579 CAAAGTCTGATCTTTGCTGGTAAGCAACTAGAAGATGGACGTACCTTGTCTGACTACAAC 193638 Query 391230 ATTGATAAGGATGCAACACTTCA 391252 ||| | ||||| | || ||||| Sbjct 193639 ATTTAGAAGGAGTCCACCCTTCA 193661 >seq11036 Length=1096 Score = 102 bits (112), Expect = 3e-16 Identities = 91/113 (81%), Gaps = 1/113 (1%) Strand=Plus/Plus Query 451340 GCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTA 451399 || ||||| |||||||| || |||||||||| |||||||| ||| ||||||||| | Sbjct 3 GCCTATTTTAATGATGC-CACTGGCAAGCAACCAAAGATGCTGGAACTATTGCTGGCCTG 61 Query 451400 AATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACT 451452 |||||| | |||| || ||||| ||||||||||||||| | || ||||| || Sbjct 62 AATGTTATGAGAATCATCAATGAGCCTACAGCAGCTGCTATTGCTTATGGCCT 114 >seq73 Length=8706776 Score = 100 bits (110), Expect = 1e-15 Identities = 145/203 (71%), Gaps = 5/203 (2%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||| | ||||| || || || || ||||||| || | |||||| | || Sbjct 2651547 ATGCAGATTTTCATAAAAACCCTTACGGGGAAGACTATTAG-CTCAAAGTTGAACCCTCG 2651605 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || ||| ||| ||| || || || ||||| ||||||||||||||||||||| Sbjct 2651606 GACACTATAGAAAATATAAAAGCCAAGATCCAGGATAACGAAGGAATTCCTCCTGATCAA 2651665 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 | | | || || | | || || ||||| |||||| || | ||||| || || || Sbjct 2651666 CCAAGATTGATCGTTGCTGGTAAGCAACTGGAAGATAGACGTACTTT----GACTACAAC 2651721 Query 391230 ATTGATAAGGATGCAACACTTCA 391252 ||||| ||||| | || ||||| Sbjct 2651722 ATTGAGAAGGAGTCCACCCTTCA 2651744 >seq19 Length=19581918 Score = 96.9 bits (106), Expect = 1e-14 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 ||||| ||||||| ||||||| || || ||||| |||||||| || ||||||||||| Sbjct 13351170 GTTACCCATGCAGTTGTTACTGTACCAGCCTATTTTAATGATGCCCAGCGGCAAGCAACC 13351111 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACC 451425 |||||||| ||| ||||||||| | |||||| | | || || ||||| || Sbjct 13351110 AAAGATGCTGGAACTATTGCTGGCCTGAATGTTATGAGGATCATCAATGAGCC 13351058 >seq6 Length=30479472 Score = 93.3 bits (102), Expect = 2e-13 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||| | ||||| || || || || ||| |||| || || | |||| | || Sbjct 3763529 ATGCAGATTTTCATAAAAACCCTTACAGGGAAGACTGTTACGCTGGAGGCTGAACCCTCG 3763588 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | | ||| | ||| || || || |||||||||||||||||||||||||| Sbjct 3763589 GACACTACAGAAAATGCAAAAGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 3763648 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | | || || | || || ||||| ||||||||| | |||||| | || | | Sbjct 3763649 CAAAGACTGATCTTTGCTGGTAAGCAACTGGAAGATGGATGTACTTTGTCTGACCACAGC 3763708 Query 391230 ATTGATAAGGA 391240 ||| | ||||| Sbjct 3763709 ATTCAGAAGGA 3763719 >seq26 Length=15501076 Score = 91.5 bits (100), Expect = 6e-13 Identities = 135/191 (71%), Gaps = 3/191 (2%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| ||||| || || | || |||||||| | || |||||| || Sbjct 10002039 ATGCAGATTTTCGTAAAAACCCTTACAGAGAAGACTATTACAATGGAGGTTGAACCA--- 10001983 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || ||| | | || || || || ||||||||||||||||||||| |||| Sbjct 10001982 GATACTATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTAATCAT 10001923 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | |||| || | | || ||||| |||||| || | ||| | | || || || Sbjct 10001922 CAAAGACTAATCTTTGCTGATAAGCAACTGGAAGATTGACGTACTGAGTCTGACTACAAC 10001863 Query 391230 ATTGATAAGGA 391240 ||| | ||||| Sbjct 10001862 ATTCAGAAGGA 10001852 >seq449 Length=598082 Score = 84.2 bits (92), Expect = 9e-11 Identities = 174/256 (68%), Gaps = 15/256 (6%) Strand=Plus/Plus Query 451343 TATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAAT 451402 |||| |||||||| || |||||||||| |||||||| ||| ||||||||| | | | Sbjct 96052 TATTGAAATGATGC-CAGTGGCAAGCAACGAAAGATGCTGGAACTATTGCTGGCCTGAGT 96110 Query 451403 GTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCA 451462 ||| | || || ||| | ||||||||||||||| | || ||| | || | | Sbjct 96111 GTTATGAAGATCATCAATAAGCCTACAGCAGCTGCTATTGCTTATTGCCT-------TGA 96163 Query 451463 AAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACT 451522 |||| ||| |||| || || | || |||||| | || | ||||| || Sbjct 96164 TAAGAGGGAGA--AAAAGAACATCCTGGTGTTTGATCTGAGTAGTGGAACCTTCCATGTG 96221 Query 451523 TCTGTACTTTCAATTG--AAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTC 451580 ||| | || | |||| || || || || |||| | ||| |||||| | ||||||| Sbjct 96222 TCTCTTCTCCCCATTGACAATTTGATGTCTTCAAAGTCATGGCCACCAATAGAGATACTC 96281 Query 451581 ATCTAGGAGGTGAAGA 451596 ||| |||||||||| Sbjct 96282 ATC---GAGGTGAAGA 96294 >seq30 Length=14751797 Score = 84.2 bits (92), Expect = 9e-11 Identities = 134/191 (70%), Gaps = 1/191 (1%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||| ||||||| || | ||| || || || | ||||| |||||| || Sbjct 13753570 ATGCAGATTTTCATTAAAACCCTTATTGGGAAGACCATCATGCTTGAGGTTGAACCACTG 13753629 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || ||| | | ||| || || ||||||||||| |||||||||| |||| Sbjct 13753630 GATACTATAGAAAATGTAAAAGCCAAGATCTAAGATAAGGAAAGAATTCCTCCCAATCAG 13753689 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | |||| || | || || ||| | |||||||| | | ||| | || || || Sbjct 13753690 CAAAGACTAATCTTTGCTGGTAAGCAAATGGAAGATGGGTGTA-TTTATCTGACTACAAC 13753748 Query 391230 ATTGATAAGGA 391240 ||| | ||||| Sbjct 13753749 ATTCAGAAGGA 13753759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975402406686164