Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ictidomys_20tridecemlineatus_20[refseq_20GCF_5F000236235.1_202011- 11-29] 12,483 sequences; 2,478,393,770 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq259 313 2e-79 seq557 147 2e-29 seq654 138 9e-27 seq362 138 9e-27 seq1181 129 4e-24 seq1127 129 4e-24 seq291 116 3e-20 seq180 113 3e-19 seq10070 102 6e-16 seq324 95.1 9e-14 seq74 95.1 9e-14 seq22 95.1 9e-14 >seq259 Length=2316233 Score = 313 bits (346), Expect = 2e-79 Identities = 963/1469 (66%), Gaps = 28/1469 (2%) Strand=Plus/Minus Query 517258 GGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGAC 517317 ||| || ||||||||||| ||||||||||| | ||||| || || ||||| ||||| || Sbjct 1744348 GGCTGTGACATTAAGAATTCCATTGGCATCAATGTCAAAGGTCACCTCAATCTGAGGAAC 1744289 Query 517318 CCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTT 517377 || || | ||||| || || || || | ||| ||||| || || || Sbjct 1744288 TCCCCTGGGTGCAGGAGGTATTCCAGTCAGGTCAAAGCGCCCCAGTAGGTTGTTGTCACG 1744229 Query 517378 AGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATA 517437 || | ||||||||||| | | ||||| || ||| ||| ||||||||||| Sbjct 1744228 TGTCATAGCCCGTTCACCCTCATATACCTGGATCAGCACCCCAGGTTGGTTATCTGAATA 1744169 Query 517438 AGTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATTGG 517496 || || || | |||| | | ||| || || || | || | | ||| | | Sbjct 1744168 TGTGGTGAAGA-TCTGTGTCTGCTTAGTGGGGATGGTGGAATTACGCTTAATCAGCACAG 1744110 Query 517497 TCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAA 517556 |||| | || || ||||| ||||| || ||||| ||||| | || || | | | | Sbjct 1744109 TCATCACGCCCCCAGCTGTCTCTAACCCTAGAGACAGAGGGGCCACGTCCAACAAAAGCA 1744050 Query 517557 TATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCAT 517616 || || | |||||| | | ||| | | ||| ||||| || | ||||| |||| Sbjct 1744049 GATCCTGTACCTTTTCAGATTTGTCACCCATCAAAATGGCTGCCTGTACTGCAGCCCCAT 1743990 Query 517617 ATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTG 517676 | || || || ||||||||||| | | | || || | ||||| ||| | | Sbjct 1743989 AGGCTACTGCCTCATCAGGATTGATGCTCTTGTTGAGATCACGTCCATTAAAATAGTCCT 1743930 Query 517677 AAAGAAGTTGTCTT-ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGC 517735 ||| |||| ||| |||||||| || |||| || || || ||||| ||||| ||||| Sbjct 1743929 GAAGCAGTT-TCTGCACCTTAGGGATGCGAGTGGAGCCCCCGACTAAAACAATGTCATGG 1743871 Query 517736 ACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAG---ACCC 517792 | | | ||||||| || | ||| | | ||||||| || ||||| || |||| Sbjct 1743870 ATTTTAGCCTTATCCATCTTGGCATCTCGAAGAGCTTTTTCCACAGGTTCCAGGGTACCC 1743811 Query 517793 GCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATA 517851 ||||||| ||||| ||| || ||||| || ||||| || | || | | || | Sbjct 1743810 ---CTAAACAGGTCTGCACACAGCTCTTCAAACCGGGCTCTGGTGATAG--ATGTGTAGA 1743756 Query 517852 A-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTG 517910 | ||||| ||||| | | ||||||| ||| | | | ||| || || || || | Sbjct 1743755 AGTCAATGCCTTCATAAAGTGAATCAATTTCCAGATTGGCTTGGGTGCTGGATGACAGGG 1743696 Query 517911 CACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTT--TTG--CTGATTGA 517966 | || || || || || || || | | | | | |||| ||| ||| ||| Sbjct 1743695 TCCTCTTGGCTCGCTCGCAAGCGGTACGCAAACGCCTCACGGCTCGCTTGTTCTGGCTGA 1743636 Query 517967 TTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTA 518026 | ||| | || | ||| || ||||| || || ||| | | ||||| | || Sbjct 1743635 TG----TCTTTCTTGTGTTTCCTTTTGAACTCCTCTACAAAGTGGTTCACAAGCCTGTTG 1743580 Query 518027 TCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCA 518086 || || || || || || | | || | || | ||||| |||||| |||| ||| Sbjct 1743579 TCGAAGTCCTCTCCACCTAGGTGGGTGTCCCCAGCTGTAGCCTTTACTTCAAAAATCCCA 1743520 Query 518087 TCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACA 518146 || || | | || | | ||||||| || || ||||||| |||||| || |||||| Sbjct 1743519 TCATCTATGGTCAGGATGGATACATCAAATGTGCCTCCACCCAAATCAAAGATGAGTACA 1743460 Query 518147 T-TCATT-TCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTT 518204 | || | || || | || || | | ||| |||||||||| |||||||| || |||| Sbjct 1743459 TGTCGCTCTCCCTGACCTGCCTTATCT-AAG-CCATACGCAATGGCAGCAGCTGTGGGTT 1743402 Query 518205 CATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTC 518264 |||| || ||||| | ||||| || || ||||| |||||||| || ||||| || | Sbjct 1743401 CATTGATGATTCTTAGCACATTGAGTCCTGCAATCACACCTGCATCCTTGGTGGCCTGGC 1743342 Query 518265 TTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAA 518324 ||| || || || ||||| || || ||||| || || |||| || | | || | Sbjct 1743341 GTTGAGAGTCATTGAAATAGGCCGGTACAGTGATCACAGCATTGGTGATCAGGTGGCCTA 1743282 Query 518325 TATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGG 518384 | |||| ||| |||| ||||| ||| | || | |||||| ||||||| ||| ||| Sbjct 1743281 AAAAAGCCTCTGCAGTTTCCTTCATCTTAGTCAATACCATTGAAGAAATTTCTTCAGGGT 1743222 Query 518385 AATATTGCTTGGAT-TCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTA 518443 | | |||| | || || ||| || || | | || || || |||| Sbjct 1743221 AGAAA-GCTTTTTTCTCCCCTTTATAGGACACCAGCACCTTGGGCTTGCCTCCTTCATTG 1743163 Query 518444 ATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTA 518503 || |||| ||| ||||| |||||||||||| || ||| | |||||||| | || Sbjct 1743162 ATCACTTGAAAAGGCCAAAGTTTCATATCTGACTGCACAACAGGATCATTAAATTTCCTG 1743103 Query 518504 CCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTG 518563 ||||| | ||||| |||||||| | ||| || ||||| || || | || | |||| Sbjct 1743102 CCAATCAGACGTTTGGCATCAAAGACAGTGTTCTGAGGATTCATGGCTACCTGGTTTTTG 1743043 Query 518564 GCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGA 518623 |||||||| ||||| || ||||||| || || || | ||||| || || ||||| Sbjct 1743042 GCTGCATCCCCAATAAGCCGTTCTGTATCCGTGAAGGCCACATAGCTGGGGGTGGTGCGG 1742983 Query 518624 TTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTA 518683 || || || ||||| ||||| || || || || |||| || | || ||||||||| | Sbjct 1742982 TTGCCCTGGTCATTGGCAATGATCTCCACCTTGCCATGCTGGAACACCCCTACACAAGAA 1742923 Query 518684 AAAGTTGTTCCTAAATCAATACCAATAGC 518712 | || || || || || || || || || Sbjct 1742922 TAGGTGGTACCCAAGTCGATGCCTATGGC 1742894 >seq557 Length=306283 Score = 147 bits (162), Expect = 2e-29 Identities = 194/266 (73%), Gaps = 5/266 (2%) Strand=Plus/Minus Query 518118 TTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGAC 518177 |||||||||||| |||||| || || | ||| | ||| | | | ||||| || | Sbjct 61428 TTCCACCACCCAGATCAAACATCAGGATGTTCTTCTCT---CCCTCCCTCTTATCCAGGC 61372 Query 518178 CATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAA 518237 |||| |||| |||||| || || || ||||| || || |||| |||||| || ||||||| Sbjct 61371 CATAAGCAATAGCAGCTGCTGTAGGCTCATTGATTATCCTCATAACATTCAGGCCAGCAA 61312 Query 518238 TTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAA 518297 | |||| |||||||| || | ||| || | ||| |||||| | || || ||||||| Sbjct 61311 TAGTTCCAGCATCTTTGGTTGGTTGCTGCTGGGCATCATTAAAACAGGCCGGTACAGTAA 61252 Query 518298 TAACGGCATCAGTTA-CTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTT 518356 ||| |||| || | ||||||| |||| |||||| || || | |||||||||| | Sbjct 61251 CAACTGCATGGGTAACCTTCTTTCCCAA-ATAAGCCTCAGCAGTCTCTTTCATTTTAGTG 61193 Query 518357 AAAATCATTGATGAAATTTGTTCTGG 518382 | ||| || | || |||| |||||| Sbjct 61192 AGAATAATAGCAGAGATTTCTTCTGG 61167 >seq654 Length=198565 Score = 138 bits (152), Expect = 9e-27 Identities = 210/293 (72%), Gaps = 6/293 (2%) Strand=Plus/Plus Query 518090 TCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTC 518149 |||| || | ||||| |||| |||||||||||||| |||||| | || | ||| Sbjct 161335 TCAATGGAGAGAAGAGACACATAGAAGGTTCCACCACCCAGATCAAACACCAGGATGTTC 161394 Query 518150 ATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTA 518209 |||||| || | | |||| || | ||| ||| |||||| || || || ||||| Sbjct 161395 --TTCTTT-TCCTCCCTCTTATTCAGGCAATAAGCATTAGCAGCTGCTGTAGGCTCATTG 161451 Query 518210 ATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGT 518269 || || |||| |||||| || |||||||| |||| |||||||| || ||||| | || Sbjct 161452 ATGATCCTCATAACATTCAGGCCAGCAATATTTCCAGCATCTTTGGTTGCTTGCCACTG- 161510 Query 518270 GAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAA 518329 | ||| |||| ||| | || |||||| ||| |||| || || | || |||| |||| Sbjct 161511 GCATCATTAATATAGACTGGTTCAGTAACAACTGCAT-GGTAACCTTCTTCCCAA-ATAA 161568 Query 518330 GCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGG 518382 || || || | |||||||||| | |||||||| | || |||| |||||| Sbjct 161569 GCCTCAGCAGTCTCTTTCATTTTAGTGAAAATCATAGCAGAGATTTCTTCTGG 161621 >seq362 Length=1080710 Score = 138 bits (152), Expect = 9e-27 Identities = 195/268 (73%), Gaps = 7/268 (3%) Strand=Plus/Minus Query 518116 GGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAG 518175 ||||||||||| || |||||| || || | ||| |||||| || | || |||| || Sbjct 904211 GGTTCCACCACTCAGATCAAACATCAGAATGTTC--TTCTTT-TCCTCCTTCTTATACAG 904155 Query 518176 ACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGC 518235 | ||| |||| |||||| || || || ||||| || || |||| |||||| || ||||| Sbjct 904154 GCAATAAGCAATAGCAGCTGCTGTAGGCTCATTGATGATCCTCATAACATTCAGGCCAGC 904095 Query 518236 AATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGT 518295 ||| |||| |||||||| || ||||| | || | ||| |||||||| | || |||| Sbjct 904094 AATAGTTCCAGCATCTTTGGTTGCTTGCCACTG-GCATCATTAAAATAGACTGGTTCAGT 904036 Query 518296 AATAACGGCATCAGTTA-CTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTAC 518354 | || |||| || | |||||| || | |||||| | || | |||||||||| Sbjct 904035 GACAATTGCATGGGTAACCTTCTTCAC--AAATAAGCCTCCACAGTCTCTTTCATTTTAG 903978 Query 518355 TTAAAATCATTGATGAAATTTGTTCTGG 518382 | | |||||| | ||||||| |||||| Sbjct 903977 TGAGAATCATAGCAGAAATTTCTTCTGG 903950 >seq1181 Length=43409 Score = 129 bits (142), Expect = 4e-24 Identities = 192/267 (72%), Gaps = 14/267 (5%) Strand=Plus/Minus Query 518116 GGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAG 518175 |||||||||||||| |||||| | || || ||| |||||| || | | ||||| || Sbjct 13318 GGTTCCACCACCCAGATCAAACACCAGGACGTTC--TTCTTT-TCCTCCCTCTTATCCAG 13262 Query 518176 ACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGC 518235 | ||| |||| |||||| || || || ||||| || || |||| |||||| || | ||| Sbjct 13261 GCAATAAGCAATAGCAGCTGCTGTAGGCTCATTGATGATCCTCATAACATTCAGGCTAGC 13202 Query 518236 AATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGT 518295 ||| |||| |||||||| || |||| | || | ||| |||||||| | || |||| Sbjct 13201 AATAGTTCCAGCATCTTTGGTTGCTTCCCACTG-GCATCATTAAAATACACTGGTTCAGT 13143 Query 518296 AATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACT 518355 || ||| |||| || || | || |||| |||||| ||| ||||||||| | Sbjct 13142 AACAACTGCATGGGTAACCTTCTTCCCAA-ATAAGC-CTT--------TTTCATTTTGGT 13093 Query 518356 TAAAATCATTGATGAAATTTGTTCTGG 518382 ||||| || | || |||| |||||| Sbjct 13092 GAAAATTATAGCAGAGATTTCTTCTGG 13066 >seq1127 Length=50553 Score = 129 bits (142), Expect = 4e-24 Identities = 246/358 (69%), Gaps = 6/358 (2%) Strand=Plus/Plus Query 518028 CAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCAT 518087 |||| ||||| || ||| | ||||| || ||||| | |||||||| | || Sbjct 9864 CAAAGTCTTCTCCACCCCGATGAGTATCTCTATTGGTAGCAATGACTTGGAAGACATCAA 9923 Query 518088 CTT--CAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTAC 518145 || ||| | | ||||| |||| | |||||||||||| |||||| | || | Sbjct 9924 ATTGTCAATGGGGAGAAGAGACACATAGAAGTTTCCACCACCCAGATCAAACACCAGGAT 9983 Query 518146 ATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTC 518205 ||| |||| | ||| | | | || || | ||| |||| |||||| | || || || Sbjct 9984 GTTC--TTCTCTCCCTTCCTCTATCTCCAGGCAATAAGCAATAGCAGCTTCTGTAGGCTC 10041 Query 518206 ATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCT 518265 ||| || || || | |||||| || |||||||| |||| |||||||| || ||||| Sbjct 10042 ATTGATGATCCTGATAACATTCAGGCCAGCAATAGTTCCAGCATCTTTGGTTGCTTGCTG 10101 Query 518266 TTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTA-CTTCTTTACCAA 518324 || | ||| |||||| | || || ||||||| ||| |||| || | ||||||| |||| Sbjct 10102 CTGGGCATCATTAAAACAGGCTGGTACAGTAACAACTGCATGGGTAACCTTCTTT-CCAA 10160 Query 518325 TATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGG 518382 |||||| | || | ||||||| || | | ||| || | || |||| |||||| Sbjct 10161 AATAAGCCTCAGAAGTCTCTTTCATTATAGTGAGAATAATAGCGGAGATTTCTTCTGG 10218 >seq291 Length=1898989 Score = 116 bits (128), Expect = 3e-20 Identities = 157/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 518168 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 518227 ||| | |||| ||| ||| |||||| || || || ||| |||| || |||| ||||| Sbjct 880865 TTAACCAGACGATAAGCAGTAGCAGCTGCTGTAGGCTCAGTAATGATCCTCATTACATTC 880924 Query 518228 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 518287 || |||||||| |||| | |||||| | | || | || | ||| ||||||||||| Sbjct 880925 AGGCCAGCAATAGTTCCAGAATCTTTGCTTGACTGCCACTGGGCATCTTTAAAATATGCC 880984 Query 518288 GGAACAGTAATAACGGCATCAGTTA-CTTCTTTACCAATATAAGCGCTTGCCGTTTGTTT 518346 | ||||||| ||| |||| || | ||||||| |||| ||||| | || || | ||| Sbjct 880985 GTTACAGTAACAACTGCATAGGTAATCTTCTTTCCCAA-ATAAGTGTGAGCAGTATCTTT 881043 Query 518347 CATTTTACTTAAAATCATTGATGAAATTTGTTCTGG 518382 |||||| | | ||| || | ||||||| |||||| Sbjct 881044 TATTTTAGTGAGAATTATAGCAGAAATTTATTCTGG 881079 >seq180 Length=4215775 Score = 113 bits (124), Expect = 3e-19 Identities = 485/757 (64%), Gaps = 30/757 (4%) Strand=Plus/Plus Query 517505 CCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGA 517564 ||||| | ||||| | |||||| ||||||||||||||||| | || | | || |||| Sbjct 3460186 CCACCAGAAGTTTCAATACCAAGGGAAAGAGGAGTGACATCCAAGAGCAGCAAATCTTGA 3460245 Query 517565 AGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACA 517624 | |||| | | || || | ||| ||| | || | ||| |||||||| |||||| Sbjct 3460246 ACATTTTTA-GGCTATGTTCAGATAAAATGGCTACCTGGACAGCTGCACCATAAGCAACA 3460304 Query 517625 GCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGT 517684 || |||||||| || | | | ||||| || ||| ||||||| || | | ||||| Sbjct 3460305 GCATCATCAGGGTTGATACTCTCATTCCATTCTTTTCCATTGATGAAGTCCTACAGAAGC 3460364 Query 517685 TGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGA 517743 | ||| | || || ||| ||| || || || || | |||||| ||||| | ||| | Sbjct 3460365 T-TCTGAATCTGGGGGATATGAGTAGAACCACCCACCAGTACAATATCATGGATATGTAA 3460423 Query 517744 -TTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACA 517802 ||| || | || | || | | | |||||| || || ||||| | | |||| Sbjct 3460424 CTTTGTCTAACTTGGCATTTCAAAGAGATTTTTCTACAGGATCAAGGGTGCCACGGAACA 3460483 Query 517803 AGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTT 517862 | | ||| ||||| ||| ||| | |||| | | || | | ||||||| Sbjct 3460484 GGATTCAAC-----TCTTCAAATCAAGCACAGGTAATGGAGGTATAGAAGTTGATTCCTT 3460538 Query 517863 CGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCAC 517922 | | | |||||||| ||| | ||| || | ||||| || | | | ||||| | Sbjct 3460539 CATAGAGAGAATCAATCTCAGTACTAGCCTGTTTGCTGGAAGAGAGGGTATGCTTAGCTC 3460598 Query 517923 GTTCACATGCTGTCCTTAGTC-TTCGTAAG-GCTTTTGCTGATTGATTCAAATCTGTTTT 517980 ||||||||| || || | || | || |||||| | || | | || | || Sbjct 3460599 TTTCACATGCAGTATGGAGACGTTGGACAGCTCTTTTGTT--TTCACGGATGTCCTTCTT 3460656 Query 517981 ATATTTTCTCTTGAAATCTTCAACACACCATGTT-ACAAGACGATTATCAAAATCTTCAC 518039 || |||| |||||| || | | | | || || | ||| |||||||||||||| | Sbjct 3460657 ATGCTTTCCCTTGAACTCAGAGATAAAAAACATTGACCACACGGTTATCAAAATCTTCTC 3460716 Query 518040 CTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACA 518099 | ||||| | || | ||| |||| | || || | ||| || | Sbjct 3460717 CACCCAAGTGGGTGTCTCC------AGCTGTGGATTTGA---------CCTCAGTAGTGA 3460761 Query 518100 AAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGT 518159 | | | |||||| || |||| || | || |||||| || ||||| |||| Sbjct 3460762 AGATTGACACATCAAAAGTGCCACTTCCTAAAT-AAAAATCAGCACATTTCTTTCAGCTC 3460820 Query 518160 CTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCA 518219 | ||||| || | | |||| |||| | ||| |||||||| | ||| || || || | Sbjct 3460821 CAACCTTTTTGTCTAAATCATAAGCAATAACAGTGGCAGTTGGCTAATTGATTATCCTAA 3460880 Query 518220 AAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGT 518256 ||||| |||||||||||| |||| || ||||| || Sbjct 3460881 GTACATTGAGACCAGCAATTATTCCGGCGTCTTTGGT 3460917 >seq10070 Length=1232 Score = 102 bits (112), Expect = 6e-16 Identities = 155/216 (72%), Gaps = 5/216 (2%) Strand=Plus/Minus Query 518116 GGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAG 518175 ||||||||||| || |||||| | || | ||| |||||| || | ||||| || Sbjct 1129 GGTTCCACCACTCAGATCAAACACCAGGATGTTC--TTCTTT-TCCTCCGGCTTATCCAG 1073 Query 518176 ACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGC 518235 | ||| |||| |||||| || || || ||||| || ||||||| |||||| || ||||| Sbjct 1072 GCAATAAGCAATAGCAGCTGCTGTAGGCTCATTGATGATTCTCATAACATTCAGGCCAGC 1013 Query 518236 AATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGT 518295 ||| |||| |||||||| || |||| || | ||| |||||||| || |||| Sbjct 1012 AATAGTTCCAGCATCTTTGGTTGCTTCCAACTG-GCATCATTAAAATAGATTGGTTCAGT 954 Query 518296 AATAACGGCATCAGTTACTTCTTTACCAATATAAGC 518331 || ||| || | || || | || |||| |||||| Sbjct 953 AACAACTGCGTGGGTAACCTTCTTCCCAA-ATAAGC 919 >seq324 Length=1494514 Score = 95.1 bits (104), Expect = 9e-14 Identities = 93/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 367000 GCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTATTCATTAT 367059 || || ||||| ||||| ||||| ||||||||| | || || | || ||||||||| Sbjct 949248 GCTACTATAGCTTTTGGAATGGGCATTAATAAAGCTGACATTCGCAGAGTCATTCATTAT 949307 Query 367060 GGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCGTGATGGA 367119 || ||||| || | || ||| |||||||| |||||||||||||| || ||||||||| Sbjct 949308 GGTGCTCCTAAAGAAATGGAATCATATTATCAGGAAATTGGTAGAGCTGGCCGTGATGGA 949367 >seq74 Length=8649107 Score = 95.1 bits (104), Expect = 9e-14 Identities = 106/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224 || || || | ||| || |||| ||||||||||||||| ||||| || || || | ||| Sbjct 7579693 TTCTTGTCCAAACCGTAAGCAATAGCAGCAGCAGTTGGCTCATTGATTATCCTAAGTACA 7579752 Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284 || ||||||||||| |||| |||||||| || || || | || ||||| || || || Sbjct 7579753 TTGAGACCAGCAATGGTTCCGGCATCTTTGGTTGCCTGACGCTGAGAATCATTGAAGTAA 7579812 Query 518285 GCAGGAACAGTAATAACGGCAT 518306 || || || || | || |||| Sbjct 7579813 GCTGGCACTGTGACCACAGCAT 7579834 >seq22 Length=17878332 Score = 95.1 bits (104), Expect = 9e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 635441 TGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGTCTTAAT 635500 ||||| || || |||| |||||||||||||| ||||| || ||| | || || ||| | Sbjct 15457669 TGTACACTTATCCTGACTGAGGGAGATTCAGCCAAAACTTTGGCTGTTTCAGGCCTTGGT 15457610 Query 635501 GTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGG 635560 ||| | || ||||| | ||||| |||||||| |||||||||||| | | ||||| | Sbjct 15457609 GTTGTAGGGAGAGACAAGTATGGTGTTTTCCCTCTTAGAGGAAAAATACTCAATGTCCGA 15457550 Query 635561 GATGCTAGTCCTAAA 635575 || ||| || |||| Sbjct 15457549 GAAGCTTCTCATAAA 15457535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780202952420998