Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ictidomys_20tridecemlineatus_20[refseq_20GCF_5F000236235.1_202011-
11-29] 12,483 sequences; 2,478,393,770 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq259 313 2e-79
seq557 147 2e-29
seq654 138 9e-27
seq362 138 9e-27
seq1181 129 4e-24
seq1127 129 4e-24
seq291 116 3e-20
seq180 113 3e-19
seq10070 102 6e-16
seq324 95.1 9e-14
seq74 95.1 9e-14
seq22 95.1 9e-14
>seq259
Length=2316233
Score = 313 bits (346), Expect = 2e-79
Identities = 963/1469 (66%), Gaps = 28/1469 (2%)
Strand=Plus/Minus
Query 517258 GGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGAC 517317
||| || ||||||||||| ||||||||||| | ||||| || || ||||| ||||| ||
Sbjct 1744348 GGCTGTGACATTAAGAATTCCATTGGCATCAATGTCAAAGGTCACCTCAATCTGAGGAAC 1744289
Query 517318 CCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTT 517377
|| || | ||||| || || || || | ||| ||||| || || ||
Sbjct 1744288 TCCCCTGGGTGCAGGAGGTATTCCAGTCAGGTCAAAGCGCCCCAGTAGGTTGTTGTCACG 1744229
Query 517378 AGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATA 517437
|| | ||||||||||| | | ||||| || ||| ||| |||||||||||
Sbjct 1744228 TGTCATAGCCCGTTCACCCTCATATACCTGGATCAGCACCCCAGGTTGGTTATCTGAATA 1744169
Query 517438 AGTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATTGG 517496
|| || || | |||| | | ||| || || || | || | | ||| | |
Sbjct 1744168 TGTGGTGAAGA-TCTGTGTCTGCTTAGTGGGGATGGTGGAATTACGCTTAATCAGCACAG 1744110
Query 517497 TCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAA 517556
|||| | || || ||||| ||||| || ||||| ||||| | || || | | | |
Sbjct 1744109 TCATCACGCCCCCAGCTGTCTCTAACCCTAGAGACAGAGGGGCCACGTCCAACAAAAGCA 1744050
Query 517557 TATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCAT 517616
|| || | |||||| | | ||| | | ||| ||||| || | ||||| ||||
Sbjct 1744049 GATCCTGTACCTTTTCAGATTTGTCACCCATCAAAATGGCTGCCTGTACTGCAGCCCCAT 1743990
Query 517617 ATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTG 517676
| || || || ||||||||||| | | | || || | ||||| ||| | |
Sbjct 1743989 AGGCTACTGCCTCATCAGGATTGATGCTCTTGTTGAGATCACGTCCATTAAAATAGTCCT 1743930
Query 517677 AAAGAAGTTGTCTT-ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGC 517735
||| |||| ||| |||||||| || |||| || || || ||||| ||||| |||||
Sbjct 1743929 GAAGCAGTT-TCTGCACCTTAGGGATGCGAGTGGAGCCCCCGACTAAAACAATGTCATGG 1743871
Query 517736 ACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAG---ACCC 517792
| | | ||||||| || | ||| | | ||||||| || ||||| || ||||
Sbjct 1743870 ATTTTAGCCTTATCCATCTTGGCATCTCGAAGAGCTTTTTCCACAGGTTCCAGGGTACCC 1743811
Query 517793 GCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATA 517851
||||||| ||||| ||| || ||||| || ||||| || | || | | || |
Sbjct 1743810 ---CTAAACAGGTCTGCACACAGCTCTTCAAACCGGGCTCTGGTGATAG--ATGTGTAGA 1743756
Query 517852 A-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTG 517910
| ||||| ||||| | | ||||||| ||| | | | ||| || || || || |
Sbjct 1743755 AGTCAATGCCTTCATAAAGTGAATCAATTTCCAGATTGGCTTGGGTGCTGGATGACAGGG 1743696
Query 517911 CACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTT--TTG--CTGATTGA 517966
| || || || || || || || | | | | | |||| ||| ||| |||
Sbjct 1743695 TCCTCTTGGCTCGCTCGCAAGCGGTACGCAAACGCCTCACGGCTCGCTTGTTCTGGCTGA 1743636
Query 517967 TTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTA 518026
| ||| | || | ||| || ||||| || || ||| | | ||||| | ||
Sbjct 1743635 TG----TCTTTCTTGTGTTTCCTTTTGAACTCCTCTACAAAGTGGTTCACAAGCCTGTTG 1743580
Query 518027 TCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCA 518086
|| || || || || || | | || | || | ||||| |||||| |||| |||
Sbjct 1743579 TCGAAGTCCTCTCCACCTAGGTGGGTGTCCCCAGCTGTAGCCTTTACTTCAAAAATCCCA 1743520
Query 518087 TCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACA 518146
|| || | | || | | ||||||| || || ||||||| |||||| || ||||||
Sbjct 1743519 TCATCTATGGTCAGGATGGATACATCAAATGTGCCTCCACCCAAATCAAAGATGAGTACA 1743460
Query 518147 T-TCATT-TCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTT 518204
| || | || || | || || | | ||| |||||||||| |||||||| || ||||
Sbjct 1743459 TGTCGCTCTCCCTGACCTGCCTTATCT-AAG-CCATACGCAATGGCAGCAGCTGTGGGTT 1743402
Query 518205 CATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTC 518264
|||| || ||||| | ||||| || || ||||| |||||||| || ||||| || |
Sbjct 1743401 CATTGATGATTCTTAGCACATTGAGTCCTGCAATCACACCTGCATCCTTGGTGGCCTGGC 1743342
Query 518265 TTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAA 518324
||| || || || ||||| || || ||||| || || |||| || | | || |
Sbjct 1743341 GTTGAGAGTCATTGAAATAGGCCGGTACAGTGATCACAGCATTGGTGATCAGGTGGCCTA 1743282
Query 518325 TATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGG 518384
| |||| ||| |||| ||||| ||| | || | |||||| ||||||| ||| |||
Sbjct 1743281 AAAAAGCCTCTGCAGTTTCCTTCATCTTAGTCAATACCATTGAAGAAATTTCTTCAGGGT 1743222
Query 518385 AATATTGCTTGGAT-TCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTA 518443
| | |||| | || || ||| || || | | || || || ||||
Sbjct 1743221 AGAAA-GCTTTTTTCTCCCCTTTATAGGACACCAGCACCTTGGGCTTGCCTCCTTCATTG 1743163
Query 518444 ATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTA 518503
|| |||| ||| ||||| |||||||||||| || ||| | |||||||| | ||
Sbjct 1743162 ATCACTTGAAAAGGCCAAAGTTTCATATCTGACTGCACAACAGGATCATTAAATTTCCTG 1743103
Query 518504 CCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTG 518563
||||| | ||||| |||||||| | ||| || ||||| || || | || | ||||
Sbjct 1743102 CCAATCAGACGTTTGGCATCAAAGACAGTGTTCTGAGGATTCATGGCTACCTGGTTTTTG 1743043
Query 518564 GCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGA 518623
|||||||| ||||| || ||||||| || || || | ||||| || || |||||
Sbjct 1743042 GCTGCATCCCCAATAAGCCGTTCTGTATCCGTGAAGGCCACATAGCTGGGGGTGGTGCGG 1742983
Query 518624 TTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTA 518683
|| || || ||||| ||||| || || || || |||| || | || ||||||||| |
Sbjct 1742982 TTGCCCTGGTCATTGGCAATGATCTCCACCTTGCCATGCTGGAACACCCCTACACAAGAA 1742923
Query 518684 AAAGTTGTTCCTAAATCAATACCAATAGC 518712
| || || || || || || || || ||
Sbjct 1742922 TAGGTGGTACCCAAGTCGATGCCTATGGC 1742894
>seq557
Length=306283
Score = 147 bits (162), Expect = 2e-29
Identities = 194/266 (73%), Gaps = 5/266 (2%)
Strand=Plus/Minus
Query 518118 TTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGAC 518177
|||||||||||| |||||| || || | ||| | ||| | | | ||||| || |
Sbjct 61428 TTCCACCACCCAGATCAAACATCAGGATGTTCTTCTCT---CCCTCCCTCTTATCCAGGC 61372
Query 518178 CATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAA 518237
|||| |||| |||||| || || || ||||| || || |||| |||||| || |||||||
Sbjct 61371 CATAAGCAATAGCAGCTGCTGTAGGCTCATTGATTATCCTCATAACATTCAGGCCAGCAA 61312
Query 518238 TTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAA 518297
| |||| |||||||| || | ||| || | ||| |||||| | || || |||||||
Sbjct 61311 TAGTTCCAGCATCTTTGGTTGGTTGCTGCTGGGCATCATTAAAACAGGCCGGTACAGTAA 61252
Query 518298 TAACGGCATCAGTTA-CTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTT 518356
||| |||| || | ||||||| |||| |||||| || || | |||||||||| |
Sbjct 61251 CAACTGCATGGGTAACCTTCTTTCCCAA-ATAAGCCTCAGCAGTCTCTTTCATTTTAGTG 61193
Query 518357 AAAATCATTGATGAAATTTGTTCTGG 518382
| ||| || | || |||| ||||||
Sbjct 61192 AGAATAATAGCAGAGATTTCTTCTGG 61167
>seq654
Length=198565
Score = 138 bits (152), Expect = 9e-27
Identities = 210/293 (72%), Gaps = 6/293 (2%)
Strand=Plus/Plus
Query 518090 TCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTC 518149
|||| || | ||||| |||| |||||||||||||| |||||| | || | |||
Sbjct 161335 TCAATGGAGAGAAGAGACACATAGAAGGTTCCACCACCCAGATCAAACACCAGGATGTTC 161394
Query 518150 ATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTA 518209
|||||| || | | |||| || | ||| ||| |||||| || || || |||||
Sbjct 161395 --TTCTTT-TCCTCCCTCTTATTCAGGCAATAAGCATTAGCAGCTGCTGTAGGCTCATTG 161451
Query 518210 ATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGT 518269
|| || |||| |||||| || |||||||| |||| |||||||| || ||||| | ||
Sbjct 161452 ATGATCCTCATAACATTCAGGCCAGCAATATTTCCAGCATCTTTGGTTGCTTGCCACTG- 161510
Query 518270 GAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAA 518329
| ||| |||| ||| | || |||||| ||| |||| || || | || |||| ||||
Sbjct 161511 GCATCATTAATATAGACTGGTTCAGTAACAACTGCAT-GGTAACCTTCTTCCCAA-ATAA 161568
Query 518330 GCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGG 518382
|| || || | |||||||||| | |||||||| | || |||| ||||||
Sbjct 161569 GCCTCAGCAGTCTCTTTCATTTTAGTGAAAATCATAGCAGAGATTTCTTCTGG 161621
>seq362
Length=1080710
Score = 138 bits (152), Expect = 9e-27
Identities = 195/268 (73%), Gaps = 7/268 (3%)
Strand=Plus/Minus
Query 518116 GGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAG 518175
||||||||||| || |||||| || || | ||| |||||| || | || |||| ||
Sbjct 904211 GGTTCCACCACTCAGATCAAACATCAGAATGTTC--TTCTTT-TCCTCCTTCTTATACAG 904155
Query 518176 ACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGC 518235
| ||| |||| |||||| || || || ||||| || || |||| |||||| || |||||
Sbjct 904154 GCAATAAGCAATAGCAGCTGCTGTAGGCTCATTGATGATCCTCATAACATTCAGGCCAGC 904095
Query 518236 AATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGT 518295
||| |||| |||||||| || ||||| | || | ||| |||||||| | || ||||
Sbjct 904094 AATAGTTCCAGCATCTTTGGTTGCTTGCCACTG-GCATCATTAAAATAGACTGGTTCAGT 904036
Query 518296 AATAACGGCATCAGTTA-CTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTAC 518354
| || |||| || | |||||| || | |||||| | || | ||||||||||
Sbjct 904035 GACAATTGCATGGGTAACCTTCTTCAC--AAATAAGCCTCCACAGTCTCTTTCATTTTAG 903978
Query 518355 TTAAAATCATTGATGAAATTTGTTCTGG 518382
| | |||||| | ||||||| ||||||
Sbjct 903977 TGAGAATCATAGCAGAAATTTCTTCTGG 903950
>seq1181
Length=43409
Score = 129 bits (142), Expect = 4e-24
Identities = 192/267 (72%), Gaps = 14/267 (5%)
Strand=Plus/Minus
Query 518116 GGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAG 518175
|||||||||||||| |||||| | || || ||| |||||| || | | ||||| ||
Sbjct 13318 GGTTCCACCACCCAGATCAAACACCAGGACGTTC--TTCTTT-TCCTCCCTCTTATCCAG 13262
Query 518176 ACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGC 518235
| ||| |||| |||||| || || || ||||| || || |||| |||||| || | |||
Sbjct 13261 GCAATAAGCAATAGCAGCTGCTGTAGGCTCATTGATGATCCTCATAACATTCAGGCTAGC 13202
Query 518236 AATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGT 518295
||| |||| |||||||| || |||| | || | ||| |||||||| | || ||||
Sbjct 13201 AATAGTTCCAGCATCTTTGGTTGCTTCCCACTG-GCATCATTAAAATACACTGGTTCAGT 13143
Query 518296 AATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACT 518355
|| ||| |||| || || | || |||| |||||| ||| ||||||||| |
Sbjct 13142 AACAACTGCATGGGTAACCTTCTTCCCAA-ATAAGC-CTT--------TTTCATTTTGGT 13093
Query 518356 TAAAATCATTGATGAAATTTGTTCTGG 518382
||||| || | || |||| ||||||
Sbjct 13092 GAAAATTATAGCAGAGATTTCTTCTGG 13066
>seq1127
Length=50553
Score = 129 bits (142), Expect = 4e-24
Identities = 246/358 (69%), Gaps = 6/358 (2%)
Strand=Plus/Plus
Query 518028 CAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCAT 518087
|||| ||||| || ||| | ||||| || ||||| | |||||||| | ||
Sbjct 9864 CAAAGTCTTCTCCACCCCGATGAGTATCTCTATTGGTAGCAATGACTTGGAAGACATCAA 9923
Query 518088 CTT--CAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTAC 518145
|| ||| | | ||||| |||| | |||||||||||| |||||| | || |
Sbjct 9924 ATTGTCAATGGGGAGAAGAGACACATAGAAGTTTCCACCACCCAGATCAAACACCAGGAT 9983
Query 518146 ATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTC 518205
||| |||| | ||| | | | || || | ||| |||| |||||| | || || ||
Sbjct 9984 GTTC--TTCTCTCCCTTCCTCTATCTCCAGGCAATAAGCAATAGCAGCTTCTGTAGGCTC 10041
Query 518206 ATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCT 518265
||| || || || | |||||| || |||||||| |||| |||||||| || |||||
Sbjct 10042 ATTGATGATCCTGATAACATTCAGGCCAGCAATAGTTCCAGCATCTTTGGTTGCTTGCTG 10101
Query 518266 TTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTA-CTTCTTTACCAA 518324
|| | ||| |||||| | || || ||||||| ||| |||| || | ||||||| ||||
Sbjct 10102 CTGGGCATCATTAAAACAGGCTGGTACAGTAACAACTGCATGGGTAACCTTCTTT-CCAA 10160
Query 518325 TATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGG 518382
|||||| | || | ||||||| || | | ||| || | || |||| ||||||
Sbjct 10161 AATAAGCCTCAGAAGTCTCTTTCATTATAGTGAGAATAATAGCGGAGATTTCTTCTGG 10218
>seq291
Length=1898989
Score = 116 bits (128), Expect = 3e-20
Identities = 157/216 (73%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 518168 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 518227
||| | |||| ||| ||| |||||| || || || ||| |||| || |||| |||||
Sbjct 880865 TTAACCAGACGATAAGCAGTAGCAGCTGCTGTAGGCTCAGTAATGATCCTCATTACATTC 880924
Query 518228 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 518287
|| |||||||| |||| | |||||| | | || | || | ||| |||||||||||
Sbjct 880925 AGGCCAGCAATAGTTCCAGAATCTTTGCTTGACTGCCACTGGGCATCTTTAAAATATGCC 880984
Query 518288 GGAACAGTAATAACGGCATCAGTTA-CTTCTTTACCAATATAAGCGCTTGCCGTTTGTTT 518346
| ||||||| ||| |||| || | ||||||| |||| ||||| | || || | |||
Sbjct 880985 GTTACAGTAACAACTGCATAGGTAATCTTCTTTCCCAA-ATAAGTGTGAGCAGTATCTTT 881043
Query 518347 CATTTTACTTAAAATCATTGATGAAATTTGTTCTGG 518382
|||||| | | ||| || | ||||||| ||||||
Sbjct 881044 TATTTTAGTGAGAATTATAGCAGAAATTTATTCTGG 881079
>seq180
Length=4215775
Score = 113 bits (124), Expect = 3e-19
Identities = 485/757 (64%), Gaps = 30/757 (4%)
Strand=Plus/Plus
Query 517505 CCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGA 517564
||||| | ||||| | |||||| ||||||||||||||||| | || | | || ||||
Sbjct 3460186 CCACCAGAAGTTTCAATACCAAGGGAAAGAGGAGTGACATCCAAGAGCAGCAAATCTTGA 3460245
Query 517565 AGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACA 517624
| |||| | | || || | ||| ||| | || | ||| |||||||| ||||||
Sbjct 3460246 ACATTTTTA-GGCTATGTTCAGATAAAATGGCTACCTGGACAGCTGCACCATAAGCAACA 3460304
Query 517625 GCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGT 517684
|| |||||||| || | | | ||||| || ||| ||||||| || | | |||||
Sbjct 3460305 GCATCATCAGGGTTGATACTCTCATTCCATTCTTTTCCATTGATGAAGTCCTACAGAAGC 3460364
Query 517685 TGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGA 517743
| ||| | || || ||| ||| || || || || | |||||| ||||| | ||| |
Sbjct 3460365 T-TCTGAATCTGGGGGATATGAGTAGAACCACCCACCAGTACAATATCATGGATATGTAA 3460423
Query 517744 -TTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACA 517802
||| || | || | || | | | |||||| || || ||||| | | ||||
Sbjct 3460424 CTTTGTCTAACTTGGCATTTCAAAGAGATTTTTCTACAGGATCAAGGGTGCCACGGAACA 3460483
Query 517803 AGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTT 517862
| | ||| ||||| ||| ||| | |||| | | || | | |||||||
Sbjct 3460484 GGATTCAAC-----TCTTCAAATCAAGCACAGGTAATGGAGGTATAGAAGTTGATTCCTT 3460538
Query 517863 CGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCAC 517922
| | | |||||||| ||| | ||| || | ||||| || | | | ||||| |
Sbjct 3460539 CATAGAGAGAATCAATCTCAGTACTAGCCTGTTTGCTGGAAGAGAGGGTATGCTTAGCTC 3460598
Query 517923 GTTCACATGCTGTCCTTAGTC-TTCGTAAG-GCTTTTGCTGATTGATTCAAATCTGTTTT 517980
||||||||| || || | || | || |||||| | || | | || | ||
Sbjct 3460599 TTTCACATGCAGTATGGAGACGTTGGACAGCTCTTTTGTT--TTCACGGATGTCCTTCTT 3460656
Query 517981 ATATTTTCTCTTGAAATCTTCAACACACCATGTT-ACAAGACGATTATCAAAATCTTCAC 518039
|| |||| |||||| || | | | | || || | ||| |||||||||||||| |
Sbjct 3460657 ATGCTTTCCCTTGAACTCAGAGATAAAAAACATTGACCACACGGTTATCAAAATCTTCTC 3460716
Query 518040 CTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACA 518099
| ||||| | || | ||| |||| | || || | ||| || |
Sbjct 3460717 CACCCAAGTGGGTGTCTCC------AGCTGTGGATTTGA---------CCTCAGTAGTGA 3460761
Query 518100 AAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGT 518159
| | | |||||| || |||| || | || |||||| || ||||| ||||
Sbjct 3460762 AGATTGACACATCAAAAGTGCCACTTCCTAAAT-AAAAATCAGCACATTTCTTTCAGCTC 3460820
Query 518160 CTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCA 518219
| ||||| || | | |||| |||| | ||| |||||||| | ||| || || || |
Sbjct 3460821 CAACCTTTTTGTCTAAATCATAAGCAATAACAGTGGCAGTTGGCTAATTGATTATCCTAA 3460880
Query 518220 AAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGT 518256
||||| |||||||||||| |||| || ||||| ||
Sbjct 3460881 GTACATTGAGACCAGCAATTATTCCGGCGTCTTTGGT 3460917
>seq10070
Length=1232
Score = 102 bits (112), Expect = 6e-16
Identities = 155/216 (72%), Gaps = 5/216 (2%)
Strand=Plus/Minus
Query 518116 GGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAG 518175
||||||||||| || |||||| | || | ||| |||||| || | ||||| ||
Sbjct 1129 GGTTCCACCACTCAGATCAAACACCAGGATGTTC--TTCTTT-TCCTCCGGCTTATCCAG 1073
Query 518176 ACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGC 518235
| ||| |||| |||||| || || || ||||| || ||||||| |||||| || |||||
Sbjct 1072 GCAATAAGCAATAGCAGCTGCTGTAGGCTCATTGATGATTCTCATAACATTCAGGCCAGC 1013
Query 518236 AATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGT 518295
||| |||| |||||||| || |||| || | ||| |||||||| || ||||
Sbjct 1012 AATAGTTCCAGCATCTTTGGTTGCTTCCAACTG-GCATCATTAAAATAGATTGGTTCAGT 954
Query 518296 AATAACGGCATCAGTTACTTCTTTACCAATATAAGC 518331
|| ||| || | || || | || |||| ||||||
Sbjct 953 AACAACTGCGTGGGTAACCTTCTTCCCAA-ATAAGC 919
>seq324
Length=1494514
Score = 95.1 bits (104), Expect = 9e-14
Identities = 93/120 (78%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 367000 GCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTATTCATTAT 367059
|| || ||||| ||||| ||||| ||||||||| | || || | || |||||||||
Sbjct 949248 GCTACTATAGCTTTTGGAATGGGCATTAATAAAGCTGACATTCGCAGAGTCATTCATTAT 949307
Query 367060 GGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCGTGATGGA 367119
|| ||||| || | || ||| |||||||| |||||||||||||| || |||||||||
Sbjct 949308 GGTGCTCCTAAAGAAATGGAATCATATTATCAGGAAATTGGTAGAGCTGGCCGTGATGGA 949367
>seq74
Length=8649107
Score = 95.1 bits (104), Expect = 9e-14
Identities = 106/142 (75%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224
|| || || | ||| || |||| ||||||||||||||| ||||| || || || | |||
Sbjct 7579693 TTCTTGTCCAAACCGTAAGCAATAGCAGCAGCAGTTGGCTCATTGATTATCCTAAGTACA 7579752
Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284
|| ||||||||||| |||| |||||||| || || || | || ||||| || || ||
Sbjct 7579753 TTGAGACCAGCAATGGTTCCGGCATCTTTGGTTGCCTGACGCTGAGAATCATTGAAGTAA 7579812
Query 518285 GCAGGAACAGTAATAACGGCAT 518306
|| || || || | || ||||
Sbjct 7579813 GCTGGCACTGTGACCACAGCAT 7579834
>seq22
Length=17878332
Score = 95.1 bits (104), Expect = 9e-14
Identities = 102/135 (76%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 635441 TGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGTCTTAAT 635500
||||| || || |||| |||||||||||||| ||||| || ||| | || || ||| |
Sbjct 15457669 TGTACACTTATCCTGACTGAGGGAGATTCAGCCAAAACTTTGGCTGTTTCAGGCCTTGGT 15457610
Query 635501 GTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGG 635560
||| | || ||||| | ||||| |||||||| |||||||||||| | | ||||| |
Sbjct 15457609 GTTGTAGGGAGAGACAAGTATGGTGTTTTCCCTCTTAGAGGAAAAATACTCAATGTCCGA 15457550
Query 635561 GATGCTAGTCCTAAA 635575
|| ||| || ||||
Sbjct 15457549 GAAGCTTCTCATAAA 15457535
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3780202952420998
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |