Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ictidomys_20tridecemlineatus_20[refseq_20GCF_5F000236235.1_202011- 11-29] 12,483 sequences; 2,478,393,770 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq259 224 8e-53 seq557 134 1e-25 seq362 123 2e-22 seq1127 120 2e-21 seq654 120 2e-21 seq487 113 4e-19 seq1181 109 4e-18 seq455 104 2e-16 seq6 104 2e-16 seq8380 100 2e-15 seq19 100 2e-15 seq11036 98.7 8e-15 seq74 98.7 8e-15 seq26 96.9 3e-14 seq30 95.1 1e-13 seq10070 91.5 1e-12 seq73 89.7 4e-12 seq291 87.8 1e-11 seq353 86.0 5e-11 seq324 86.0 5e-11 >seq259 Length=2316233 Score = 224 bits (248), Expect = 8e-53 Identities = 420/606 (69%), Gaps = 27/606 (4%) Strand=Plus/Plus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 ||| ||||| || || || || ||||| ||| |||||| || || | || |||| || Sbjct 1742893 AGCCATAGGCATCGACTTGGGTACCACCTATTCTTGTGTAGGGGTGTTCCAGCATGGCAA 1742952 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 || || || ||||||||||| || || ||| | || || || ||||| | ||||| Sbjct 1742953 GGTGGAGATCATTGCCAATGACCAGGGCAACCGCACCACCCCCAGCTATGTGGCCTTCAC 1743012 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCA---AGCCACTGGTAATCCTAC 550167 ||| || |||| | |||| |||||||| ||| | || ||||| || |||||| Sbjct 1743013 GGATACAGAACGGCTTATTGGGGATGCAGCCAAAAACCAGGTAGCCA-TG--AATCCTCA 1743069 Query 550168 CAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCA 550227 || ||| | |||||||| |||||| | ||||| || | ||||||||| | ||| || Sbjct 1743070 GAACACTGTCTTTGATGCCAAACGTCTGATTGGCAGGAAATTTAATGATCCTGTTGTGCA 1743129 Query 550228 GGCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTA--TATT 550285 | |||||||||| | ||||||||| ||| | | |||| || || || | | | Sbjct 1743130 GTCAGATATGAAACTTTGGCCTTTTCAAGTGATCAATGAAGGAGGCAAGCCCAAGGTGCT 1743189 Query 550286 GAAGCTACTCATGAAGGATCTGTTAAACAA---TTTTCACCAGAACAAATTTCATCTATG 550342 | | | || || |||| | ||| || || | || ||| ||||||| || ||| Sbjct 1743190 GGTG-TCCT-ATAAAGG---GGAGAAAAAAGCTTTCTACCCTGAAGAAATTTCTTCAATG 1743244 Query 550343 GTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCA 550402 || || | || ||||| |||| || |||||| | || || | || |||| Sbjct 1743245 GTATTGACTAAGATGAAGGAAACTGCAGAGGCTTTTTTAGGCCACCTGATCACCAATGCT 1743304 Query 550403 GTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGA 550462 || || |||||||| || ||||| |||||||| ||||| || || || || ||||| || Sbjct 1743305 GTGATCACTGTACCGGCCTATTTCAATGACTCTCAACGCCAGGCCACCAAGGATGCAGGT 1743364 Query 550463 CGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCA 550522 ||||| ||||| ||||| || | || ||||||||||| || |||||||| |||| Sbjct 1743365 GTGATTGCAGGACTCAATGTGCTAAGAATCATCAATGAACCCACAGCTGCTGCCATTGCG 1743424 Query 550523 TATGGACTTGATAA-ACATAATGATCA---AGAACTTAATGTACTCATCTTTGATT---G 550575 ||||| | ||||| || | ||| ||| | |||||||||||||||||| | Sbjct 1743425 TATGGCTTAGATAAGGCA----GGTCAGGGAGAGCGACATGTACTCATCTTTGATTTGGG 1743480 Query 550576 TGGAGG 550581 |||||| Sbjct 1743481 TGGAGG 1743486 Score = 131 bits (144), Expect = 1e-24 Identities = 441/681 (65%), Gaps = 8/681 (1%) Strand=Plus/Plus Query 551913 ACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGTA 551972 || |||||||| ||||||| | | || ||||| | || ||| ||| | | ||| | Sbjct 1743671 ACCGCTTGCGAGCGAGCCAAGAGGACCCTGTCATCCAGCACCCAAGCCAATCTGGAAATT 1743730 Query 551973 GATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAAGAT 552032 |||||| | | ||| || ||||| | | || |||| | || ||| |||||||| Sbjct 1743731 GATTCACTTTATGAAGGCATTGACTTCTACACATCTATCACCAGAGCCCGGTTTGAAGAG 1743790 Query 552033 ATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTCA 552092 | ||| | || || ||||| || | ||||| || ||| ||| | | ||||| | Sbjct 1743791 CTGTGTGCAGACCTGTTTAGGGGTACCCTGGAACCTGTGGAAAAAGCTCTTCGAGATGCC 1743850 Query 552093 AAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCT 552152 ||||| ||||| | ||| | ||||| ||||| | || || || || || | || ||| Sbjct 1743851 AAGATGGATAAGGCTAAAATCCATGACATTGTTTTAGTCGGGGGCTCCACTCGCATCCCT 1743910 Query 552153 AAAATTCGCGAAATG-TTAAGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAA 552211 || | | || || || || || |||| ||||| | | || | || | || Sbjct 1743911 AAGGTGCAGAAACTGCTTCAGGACT-ATTTTAATGGACGTGATCTCAACAAGAGCATCAA 1743969 Query 552212 TCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGG---ACA 552268 ||| |||||||| || |||||||| || ||| | || ||||| ||| || ||| ||| Sbjct 1743970 TCCTGATGAGGCAGTAGCCTATGGGGCTGCAGTACAGGCAGCCATT-TTGATGGGTGACA 1744028 Query 552269 AACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTT 552328 || |||||| |||| || | | | | || || | ||||| ||||| || || Sbjct 1744029 AATC--TGAAAAGGTACAGGATCTGCTTTTGTTGGACGTGGCCCCTCTGTCTCTAGGGTT 1744086 Query 552329 AGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAA 552388 ||| |||| ||| || | |||||| || || | | ||| | || || || ||| Sbjct 1744087 AGAGACAGCTGGGGGCGTGATGACTGTGCTGATTAAGCGTAATTCCACCATCCCCACTAA 1744146 Query 552389 AAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTT 552448 | | | | || | || ||||||||||| ||| ||| || || || | | Sbjct 1744147 GCAGACACAGATCTTCACCACATATTCAGATAACCAACCTGGGGTGCTGATCCAGGTATA 1744206 Query 552449 TGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGG 552508 ||| || ||| | | || || || || | ||| || ||| | | || Sbjct 1744207 TGAGGGTGAACGGGCTATGACACGTGACAACAACCTACTGGGGCGCTTTGACCTGACTGG 1744266 Query 552509 TATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAA 552568 || |||||||| || | ||||| || || ||||| || || || || || |||||||| Sbjct 1744267 AATACCTCCTGCACCCAGGGGAGTTCCTCAGATTGAGGTGACCTTTGACATTGATGCCAA 1744326 Query 552569 TGGAATTTTGAATGTGACTGC 552589 ||||||| | ||||| || || Sbjct 1744327 TGGAATTCTTAATGTCACAGC 1744347 >seq557 Length=306283 Score = 134 bits (148), Expect = 1e-25 Identities = 165/223 (74%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 550315 ATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGC 550374 |||| | |||||| |||| || |||| || | | ||||||||| | || || || Sbjct 61160 ATTTGCTCCAGAAGAAATCTCTGCTATTATTCTCACTAAAATGAAAGAGACTGCTGAGGC 61219 Query 550375 TTTTGTTGGTCAAGAAG-TTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACT 550433 || | |||| |||||| |||| ||||||| | |||||||| || | ||||||||| Sbjct 61220 TTAT-TTGGGAAAGAAGGTTACCCATGCAGTTGTTACTGTACCGGCCTGTTTTAATGATG 61278 Query 550434 CACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTA 550493 | || | ||| | || |||||||||||| ||||||||| || |||||| | | || | Sbjct 61279 CCCAGCAGCAACCAACCAAAGATGCTGGAACTATTGCTGGCCTGAATGTTATGAGGATAA 61338 Query 550494 TCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536 ||||||| ||||| || ||||| |||| ||||| || ||||| Sbjct 61339 TCAATGAGCCTACAGCAGCTGCTATTGCTTATGGCCTGGATAA 61381 >seq362 Length=1080710 Score = 123 bits (136), Expect = 2e-22 Identities = 167/229 (73%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 550309 TAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGC 550368 |||| |||| | |||||| ||||||| ||||| || | | ||||||||| | || | Sbjct 903937 TAAAACATTTGCTCCAGAAGAAATTTCTGCTATGATTCTCACTAAAATGAAAGAGACTGT 903996 Query 550369 CAGTGCTTTTGTTGGTCAAGAAG-TTACGGATGCAGTAATAACTGTACCAGCATATTTTA 550427 |||| | | || |||||| |||| ||||| | | |||| ||||| ||||||| Sbjct 903997 GGAGGCTTATTT--GTGAAGAAGGTTACCCATGCAATTGTCACTGAACCAGTCTATTTTA 904054 Query 550428 ATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTC 550487 |||| | || | ||||| || |||||||||||| ||||||||| || |||||| | Sbjct 904055 ATGATGC-CAGTGGCAAGCAACCAAAGATGCTGGAACTATTGCTGGCCTGAATGTTATGA 904113 Query 550488 GTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536 | || |||||||| ||||| || ||||| |||| ||| | || |||| Sbjct 904114 GGATCATCAATGAGCCTACAGCAGCTGCTATTGCTTATTGCCTGTATAA 904162 Score = 111 bits (122), Expect = 1e-18 Identities = 163/227 (72%), Gaps = 4/227 (2%) Strand=Plus/Plus Query 550309 TAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGC 550368 |||| |||| | |||||| |||| || ||||| || | | ||||||||| | || || Sbjct 312917 TAAAACATTTGCTCCAGAAGAAATCTCTGCTATGATTCTCACTAAAATGAAAGAGACTGC 312976 Query 550369 CAGTGCTTTTGTTGGTCAAGAAG-TTACGGATGCAGTAATAACTGTACCAGCATATTTTA 550427 |||| | | || |||||| |||| ||||| | | ||| ||||| ||||||| Sbjct 312977 GGAGGCTTATTT--GTGAAGAAGGTTACCCATGCAATTGTTACTAAACCAGTCTATTTTA 313034 Query 550428 ATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTC 550487 |||| | || | ||||| || |||||||||||| ||||||| | || |||||| | Sbjct 313035 ATGATGC-CAGTGGCAAGCAACCAAAGATGCTGGAACTATTGCTTGCCTGAATGTTATGA 313093 Query 550488 GTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGAT 550534 || |||||||| ||||| || ||||| |||| ||| | || ||| Sbjct 313094 AGATCATCAATGAGCCTACAGCAGCTGCTATTGCTTATTGCCTGGAT 313140 Score = 102 bits (112), Expect = 7e-16 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 550309 TAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGC 550368 |||| |||| | |||| | |||| || ||||| || | | ||||||||| | || | Sbjct 545037 TAAAACATTTGCTCCAGGAGAAATCTCTGCTATGATTCTCACTAAAATGAAAGAGACTGT 545096 Query 550369 CAGTGCTTTTGTTGGTCAAGAAG-TTACGGATGCAGTAATAACTGTACCAGCATATTTTA 550427 | |||| | | || |||||| |||| || || | | ||| ||||| |||| | Sbjct 545097 GAAGGCTTATTT--GTGAAGAAGGTTACCCATACAATTGTTACTTAACCAGTCTATTGAA 545154 Query 550428 ATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTC 550487 |||| | || | ||||| || |||||||||||| ||||||||| || | |||| | Sbjct 545155 ATGATGC-CAGTGGCAAGCAACCAAAGATGCTGGAACTATTGCTGGCCTGAGTGTTATGA 545213 Query 550488 GTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536 | || |||||||| ||||| | ||||| |||| ||| | |||||||| Sbjct 545214 GGATCATCAATGAGCCTACAGAAGCTGCTATTGCTTATTGCCTTGATAA 545262 >seq1127 Length=50553 Score = 120 bits (132), Expect = 2e-21 Identities = 164/225 (73%), Gaps = 3/225 (1%) Strand=Plus/Minus Query 550311 AACA-ATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCC 550369 |||| |||| | |||||| |||| || |||| || | | | ||||||| | || | Sbjct 10230 AACACATTTGCTCCAGAAGAAATCTCCGCTATTATTCTCACTATAATGAAAGAGACTTCT 10171 Query 550370 AGTGCTTTTGTTGGTCAAGAAG-TTACGGATGCAGTAATAACTGTACCAGCATATTTTAA 550428 |||| | |||| |||||| |||| ||||||| | ||||||||||| | |||||| Sbjct 10170 GAGGCTTATTTTGGA-AAGAAGGTTACCCATGCAGTTGTTACTGTACCAGCCTGTTTTAA 10112 Query 550429 TGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCG 550488 ||| | || | ||||| || |||||||||||| ||||||||| || |||||| | | Sbjct 10111 TGATGCCCAGCAGCAAGCAACCAAAGATGCTGGAACTATTGCTGGCCTGAATGTTATCAG 10052 Query 550489 TATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGA 550533 || |||||||| ||||| | ||||| |||| ||| | || || Sbjct 10051 GATCATCAATGAGCCTACAGAAGCTGCTATTGCTTATTGCCTGGA 10007 >seq654 Length=198565 Score = 120 bits (132), Expect = 2e-21 Identities = 167/228 (73%), Gaps = 6/228 (3%) Strand=Plus/Minus Query 550311 AACA-ATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCC 550369 |||| |||| | |||||| |||| || ||||| |||| | ||||||||| | || || Sbjct 161633 AACATATTTGCTCCAGAAGAAATCTCTGCTATGATTTTCACTAAAATGAAAGAGACTGCT 161574 Query 550370 AGTGCTTTTGTTGGTCAAGAAG-TTACGGATGCAGTAATAACTGTACCAGCATATTTTAA 550428 |||| | | || |||||| |||| ||||||| | |||| ||||| ||| |||| Sbjct 161573 GAGGCTTATTTGGG--AAGAAGGTTACC-ATGCAGTTGTTACTGAACCAGTCTATATTAA 161517 Query 550429 TGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCG 550488 ||| | || | ||||| || |||||||||||| ||||||||| || |||||| | | Sbjct 161516 TGATGC-CAGTGGCAAGCAACCAAAGATGCTGGAAATATTGCTGGCCTGAATGTTATGAG 161458 Query 550489 TATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536 || |||||||| ||||| || ||||| ||| ||| | || |||| Sbjct 161457 GATCATCAATGAGCCTACAGCAGCTGCTAATGCTTATTGCCTGAATAA 161410 >seq487 Length=469708 Score = 113 bits (124), Expect = 4e-19 Identities = 156/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 550322 CCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTT 550381 ||| || ||||||| |||| |||| | | ||||||| | || || |||| | || Sbjct 325189 CCATAAGAAATTTCTGGTATGATTTTCACTATAATGAAAGAGACTGCTGAGGCTTAT-TT 325131 Query 550382 GGTCAAGAAGTT-ACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACG 550440 || |||||||| ||| ||||||| | || |||||||| ||||||||||| || | Sbjct 325130 GGGAAAGAAGTTTACGCATGCAGTTGTTACAGTACCAGCCTATTTTAATGATGGCCAGCA 325071 Query 550441 TCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGA 550500 ||||| || ||||||||| || |||||||| || || ||| | | || |||||||| Sbjct 325070 ACAAGCAACCAAAGATGCTAGAACTATTGCTGTCCTGAAAGTTATGAGAATCATCAATGA 325011 Query 550501 ACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536 ||||| || ||| | || | ||| | || ||||| Sbjct 325010 GCCTACAGCAGCTCCTATTACTTATAGCCTGGATAA 324975 >seq1181 Length=43409 Score = 109 bits (120), Expect = 4e-18 Identities = 163/228 (71%), Gaps = 14/228 (6%) Strand=Plus/Plus Query 550311 AACA-ATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCC 550369 |||| |||| | |||||| |||| || |||| |||| | ||||||||| | Sbjct 13054 AACACATTTGCTCCAGAAGAAATCTCTGCTATAATTTTCACCAAAATGAAAAAG------ 13107 Query 550370 AGTGCTTTTGTTGGTCAAGAAG-TTACGGATGCAGTAATAACTGTACCAGCATATTTTAA 550428 |||| | | || |||||| |||| ||||||| | |||| ||||| |||||||| Sbjct 13108 ---GCTTATTTGGG--AAGAAGGTTACCCATGCAGTTGTTACTGAACCAGTGTATTTTAA 13162 Query 550429 TGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCG 550488 ||| | || | |||| || |||||||||||| ||||||| | || |||||| | | Sbjct 13163 TGATGC-CAGTGGGAAGCAACCAAAGATGCTGGAACTATTGCTAGCCTGAATGTTATGAG 13221 Query 550489 TATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536 || |||||||| ||||| || ||||| |||| ||| | || ||||| Sbjct 13222 GATCATCAATGAGCCTACAGCAGCTGCTATTGCTTATTGCCTGGATAA 13269 Score = 95.1 bits (104), Expect = 1e-13 Identities = 101/131 (77%), Gaps = 2/131 (2%) Strand=Plus/Plus Query 550386 AAGAA-GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAA 550444 ||||| ||||| ||||||| | |||| ||||| ||||||||||| | || | || Sbjct 12138 AAGAATGTTACCCATGCAGTTGTTACTGAACCAGTCTATTTTAATGATGC-CAGTGGGAA 12196 Query 550445 GCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCT 550504 || || |||||||||||| ||||||||| || |||||| | | || |||||||| ||| Sbjct 12197 GCAACCAAAGATGCTGGAACTATTGCTGGCCTGAATGTTATGAGGATCATCAATGAGCCT 12256 Query 550505 ACTGCTGCTGC 550515 || || ||||| Sbjct 12257 ACAGCAGCTGC 12267 >seq455 Length=570085 Score = 104 bits (114), Expect = 2e-16 Identities = 153/212 (72%), Gaps = 5/212 (2%) Strand=Plus/Minus Query 563263 AGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCT 563322 || |||||||||||||| || || ||| ||||| |||| | || | | |||| Sbjct 193670 AGAACAAGATGAAGGGTGGACTCCTTCTAAATGTTGTAGTCAGACAAGGTACGTCCATCT 193611 Query 563323 TCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCT 563382 || ||||| || || ||||| || || |||||||||||||||||||||||||| |||| Sbjct 193610 TCTAGTTGCTTACCAGCAAAGATCAGACTTTGCTGATCAGGAGGAATTCCTTCCTTATTC 193551 Query 563383 TGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTT 563442 || || || ||||| || || ||| || | | || || |||||||| ||| Sbjct 193550 TGGATCTTGGCTTTTATATTTTCTATAGTA-AAGGTTCA--ACCTT-GAGAGTAATAGTC 193495 Query 563443 TTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || || |||| ||||| | |||||| ||||| Sbjct 193494 TTCCCCATAAGGGTTTT-ATGAAAATCTGCAT 193464 >seq6 Length=30479472 Score = 104 bits (114), Expect = 2e-16 Identities = 147/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 563268 AAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAG 563327 ||||||| |||| || || ||| ||| |||| | ||| | | |||||| || Sbjct 3763735 AAGATGAGGGGTGGACTCCTTCTGAATGCTGTGGTCAGACAAAGTACATCCATCTTCCAG 3763676 Query 563328 TTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAAT 563387 ||| || || ||||| || ||||||||||||||||||||||||||||| ||||| || || Sbjct 3763675 TTGCTTACCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGAT 3763616 Query 563388 TTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTTTACC 563447 || |||| | || | || || | | | | || || |||||||| || || Sbjct 3763615 CTTGGCTTTTGCATTTTCTGTAGTGTCCGAGGGTTCAGCCTCCAGCGTAACAGTCTTCCC 3763556 Query 563448 AGTAAGAGTTTTAACGAAAATTTGCAT 563474 ||||| ||||| | |||||| ||||| Sbjct 3763555 TGTAAGGGTTTTTATGAAAATCTGCAT 3763529 >seq8380 Length=1491 Score = 100 bits (110), Expect = 2e-15 Identities = 115/152 (76%), Gaps = 2/152 (1%) Strand=Plus/Minus Query 550386 AAGAAG-TTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAA 550444 |||||| |||| |||| || | |||| ||||| ||||||||||| | || | || Sbjct 462 AAGAAGGTTACCCATGCGGTTGTTACTGAACCAGTCTATTTTAATGATAC-CAGTGGGAA 404 Query 550445 GCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCT 550504 || || |||||||||||| ||||||||| || |||||| | | || |||||||| ||| Sbjct 403 GCAACCAAAGATGCTGGAACTATTGCTGGCCTGAATGTTATGAGGATCATCAATGAGCCT 344 Query 550505 ACTGCTGCTGCACTTGCATATGGACTTGATAA 550536 || || ||||| |||| ||| | || ||||| Sbjct 343 ACAGCAGCTGCTATTGCTTATTGCCTGGATAA 312 >seq19 Length=19581918 Score = 100 bits (110), Expect = 2e-15 Identities = 90/113 (80%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450 ||||| ||||||| | ||||||||||| ||||||||||| | || || ||||| || Sbjct 13351170 GTTACCCATGCAGTTGTTACTGTACCAGCCTATTTTAATGATGCCCAGCGGCAAGCAACC 13351111 Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACC 550503 |||||||||||| ||||||||| || |||||| | | || |||||||| || Sbjct 13351110 AAAGATGCTGGAACTATTGCTGGCCTGAATGTTATGAGGATCATCAATGAGCC 13351058 >seq11036 Length=1096 Score = 98.7 bits (108), Expect = 8e-15 Identities = 95/121 (79%), Gaps = 1/121 (1%) Strand=Plus/Plus Query 550416 CAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGAC 550475 |||| ||||||||||| | || | ||||| || |||||||||||| ||||||||| | Sbjct 1 CAGCCTATTTTAATGATGC-CACTGGCAAGCAACCAAAGATGCTGGAACTATTGCTGGCC 59 Query 550476 TTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATA 550535 | |||||| | | || |||||||| ||||| || ||||| |||| ||||| || |||| Sbjct 60 TGAATGTTATGAGAATCATCAATGAGCCTACAGCAGCTGCTATTGCTTATGGCCTGGATA 119 Query 550536 A 550536 | Sbjct 120 A 120 >seq74 Length=8649107 Score = 98.7 bits (108), Expect = 8e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450 ||||| |||| || | || || ||||| || || ||||| || || ||||| || || Sbjct 7579841 GTTACCAATGCTGTGGTCACAGTGCCAGCTTACTTCAATGATTCTCAGCGTCAGGCAACC 7579782 Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510 |||||||| ||| |||||||| || ||||| ||| | || |||||||| || |||||| Sbjct 7579781 AAAGATGCCGGAACCATTGCTGGTCTCAATGTACTTAGGATAATCAATGAGCCAACTGCT 7579722 Query 550511 GCTGCACTTGCATATGG 550527 ||||| |||| || || Sbjct 7579721 GCTGCTATTGCTTACGG 7579705 Score = 93.3 bits (102), Expect = 3e-13 Identities = 231/347 (67%), Gaps = 4/347 (1%) Strand=Plus/Minus Query 551894 AGCTCTTCGTCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTAC 551953 |||| | || ||||| | ||||| || |||||||| || || | || || || | || Sbjct 7579387 AGCTGTCCGACGTCTCCGTACTGCATGTGAAAGAGCTAAGCGTACCCTCTCTTCCAGCAC 7579328 Query 551954 TCAAACCACTATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTC 552013 ||| ||| |||||| | ||||| | | ||| ||||| || | |||| | ||| | Sbjct 7579327 TCAGGCCAGTATTGAGATTGATTCTCTCTATGAAGGAATCGACTTCTATACCTCCATTAC 7579268 Query 552014 GAGGGCCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGA 552073 | || ||||||||| | | |||| || || | || | || || ||||| Sbjct 7579267 CCGTGCTCGATTTGAAGAGTTGAATGCTGACCTGTTCCGTGGCACCCTCGACCCTGTAGA 7579208 Query 552074 ACAAGTTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGG 552133 | ||| | | ||||| | || | || || || | | ||||| ||||| || || || Sbjct 7579207 AAAAGCTCTTCGAGATGCCAAACTAGACAAGTCACAGATCCATGATATTGTACTGGTGGG 7579148 Query 552134 TGGATCTACAAGAATTCCTAAAATTCGCGAAA--TGTTAAGTTCTTATTTCAATGGTAAA 552191 ||| ||||| | || || || |||| ||| | | || ||| || |||||| || Sbjct 7579147 TGGTTCTACTCGTATCCCCAAGATTCA-GAAGCTTCTGCAGGACTTCTT-CAATGGAAAG 7579090 Query 552192 AAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGC 552238 || | ||| | || | || || |||||||||||||| |||||||| Sbjct 7579089 GAACTGAATAAGAGCATCAACCCTGATGAGGCTGTTGCTTATGGTGC 7579043 Score = 86.0 bits (94), Expect = 5e-11 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 || || ||| | || ||||| || |||||| ||||| | || |||| ||||| || Sbjct 7580736 GGCATTGATCTTGGCACCACCTACTCTTGTGTGGGTGTCTTCCAGCATGGAAAAGTGGAG 7580677 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 || |||||||||||||| || ||| ||||||| ||| ||||| | || || || || Sbjct 7580676 ATAATTGCCAATGATCAGGGGAACCGAACTACCCCAAGCTATGTCGCCTTTACTGACACA 7580617 Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCA 550149 |||| || | || ||||| ||||| |||| Sbjct 7580616 GAACGATTGATCGGCGATGCTGCAAAGAATCA 7580585 >seq26 Length=15501076 Score = 96.9 bits (106), Expect = 3e-14 Identities = 150/212 (71%), Gaps = 3/212 (1%) Strand=Plus/Plus Query 563263 AGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCT 563322 || || ||||||| ||| || || ||| ||||| |||| ||| | | ||||| Sbjct 10001831 AGCACCAGATGAAAGGTGGACTCCTTCTGAATGTTGTAGTCAGACTCAGTACGTCAATCT 10001890 Query 563323 TCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCT 563382 || ||||| || | ||||| || |||||||| |||| ||||||||||||||| ||||| Sbjct 10001891 TCCAGTTGCTTATCAGCAAAGATTAGTCTTTGATGATTAGGAGGAATTCCTTCCTTATCC 10001950 Query 563383 TGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTT 563442 || || || ||||| || || ||||| | | | || || | |||| ||| Sbjct 10001951 TGGATCTTGGCCTTTACATTTTCTATAGTATCTGGTTCA--AC-CTCCATTGTAATAGTC 10002007 Query 563443 TTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || | ||||| ||||| |||||||| ||||| Sbjct 10002008 TTCTCTGTAAGGGTTTTTACGAAAATCTGCAT 10002039 >seq30 Length=14751797 Score = 95.1 bits (104), Expect = 1e-13 Identities = 150/211 (71%), Gaps = 7/211 (3%) Strand=Plus/Minus Query 563267 CAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAA 563326 ||||||| |||||| || || ||| ||||| |||| || | | | |||||| | Sbjct 13753776 CAAGATGGAGGGTAGACTCCTTCTGAATGTTGTAGTCAGATAAA-TACACCCATCTTCCA 13753718 Query 563327 GTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAA 563386 ||| || || ||||| || ||||||||||||| |||||||||| ||| ||||||| | Sbjct 13753717 TTTGCTTACCAGCAAAGATTAGTCTTTGCTGATTGGGAGGAATTCTTTCCTTATCTTAGA 13753658 Query 563387 TTTTTTGTTTTACTGCCTCAATTGTAT-CAGTGTGAGTACA--TTCGAGAGTAACAGTTT 563443 | || |||||| || || |||| ||||| || || || || | | || | Sbjct 13753657 TCTTGGCTTTTACATTTTCTATAGTATCCAGTG---GTTCAACCTCAAGCATGATGGTCT 13753601 Query 563444 TACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | ||| |||| ||||||| |||||| ||||| Sbjct 13753600 TCCCAATAAGGGTTTTAATGAAAATCTGCAT 13753570 >seq10070 Length=1232 Score = 91.5 bits (100), Expect = 1e-12 Identities = 113/152 (74%), Gaps = 2/152 (1%) Strand=Plus/Plus Query 550386 AAGAAG-TTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAA 550444 |||||| |||| | ||||| | |||| |||| ||||||||||| | || || Sbjct 930 AAGAAGGTTACCCACGCAGTTGTTACTGAACCAATCTATTTTAATGATGC-CAGTTGGAA 988 Query 550445 GCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCT 550504 || || |||||||||||| ||||||||| || |||||| | | || |||||||| ||| Sbjct 989 GCAACCAAAGATGCTGGAACTATTGCTGGCCTGAATGTTATGAGAATCATCAATGAGCCT 1048 Query 550505 ACTGCTGCTGCACTTGCATATGGACTTGATAA 550536 || || ||||| |||| ||| | || ||||| Sbjct 1049 ACAGCAGCTGCTATTGCTTATTGCCTGGATAA 1080 >seq73 Length=8706776 Score = 89.7 bits (98), Expect = 4e-12 Identities = 148/212 (70%), Gaps = 5/212 (2%) Strand=Plus/Minus Query 563263 AGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCT 563322 || |||||||||||||| || || ||| ||||| ||| ||| | | |||| Sbjct 2651753 AGCACAAGATGAAGGGTGGACTCCTTCTCAATGTTGTAGTCAA----AGTACGTCTATCT 2651698 Query 563323 TCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCT 563382 || ||||| || || |||| || | |||| | |||||||||||||||||||| ||||| Sbjct 2651697 TCCAGTTGCTTACCAGCAACGATCAATCTTGGTTGATCAGGAGGAATTCCTTCGTTATCC 2651638 Query 563383 TGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTT 563442 || || || ||||| || || || || | | | | || ||| ||| ||| Sbjct 2651637 TGGATCTTGGCTTTTATATTTTCTATAGTGTCCGAGGGTTCAACTTTGAG-CTAATAGTC 2651579 Query 563443 TTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || || ||||| ||||| | |||||| ||||| Sbjct 2651578 TTCCCCGTAAGGGTTTTTATGAAAATCTGCAT 2651547 >seq291 Length=1898989 Score = 87.8 bits (96), Expect = 1e-11 Identities = 154/222 (69%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 550316 TTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCT 550375 ||| | |||||| ||||||| |||| || | | ||||| ||| | || || || Sbjct 881085 TTTGCTCCAGAATAAATTTCTGCTATAATTCTCACTAAAATAAAAGATACTGCTCACACT 881026 Query 550376 TTTGTTGGTCAAGAAG-TTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTC 550434 | | |||| |||||| |||| ||||||| | |||||| | ||||||||||| || | Sbjct 881025 TAT-TTGGGAAAGAAGATTACCTATGCAGTTGTTACTGTAACGGCATATTTTAAAGATGC 880967 Query 550435 ACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTAT 550494 || | || | | |||||| ||||| ||||||||| || ||||| | | || || Sbjct 880966 CCAGTGGCAGTCAAGCAAAGATTCTGGAACTATTGCTGGCCTGAATGTAATGAGGATCAT 880907 Query 550495 CAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536 | ||| ||||| || ||||| ||| ||| | || | ||| Sbjct 880906 TACTGAGCCTACAGCAGCTGCTACTGCTTATCGTCTGGTTAA 880865 >seq353 Length=1223491 Score = 86.0 bits (94), Expect = 5e-11 Identities = 104/140 (74%), Gaps = 4/140 (3%) Strand=Plus/Plus Query 563253 CCTGAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGA 563310 ||| ||||| || || || || ||||| ||| | | ||| |||||||| |||| ||| Sbjct 241186 CCTCAGACGAAGGACCAGGTGCAGGGTGGACTCTTTCTGG--ATATTGTAGTCAGAAAGA 241243 Query 563311 GTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATT 563370 || | |||||| || || || || ||||| || || || ||||| ||||| ||||| Sbjct 241244 GTACGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGAATG 241303 Query 563371 CCTTCTTTATCTTGAATTTT 563390 ||||||||||| || || || Sbjct 241304 CCTTCTTTATCCTGGATCTT 241323 >seq324 Length=1494514 Score = 86.0 bits (94), Expect = 5e-11 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 720789 TCCATCCCTTCCTGCACGACCAATTTCTTGATAATATCCTTCAATATTTTTAGGTGCACC 720848 |||||| | || || | ||||||||| ||||||||| ||| || | |||||| ||||| Sbjct 949367 TCCATCACGGCCAGCTCTACCAATTTCCTGATAATATGATTCCATTTCTTTAGGAGCACC 949308 Query 720849 ATAATGTATAACTGCTCTCACATCACTTTTATTTATTCCCATTCCAAAAGCAATCGTCGC 720908 |||||| || ||| | | ||| |||||| || |||||||||||||| || || || Sbjct 949307 ATAATGAATGACTCTGCGAATGTCAGCTTTATTAATGCCCATTCCAAAAGCTATAGTAGC 949248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028635842661670