Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ictidomys_20tridecemlineatus_20[refseq_20GCF_5F000236235.1_202011- 11-29] 12,483 sequences; 2,478,393,770 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq259 183 2e-40 seq362 120 2e-21 seq1181 111 1e-18 seq487 104 2e-16 seq74 104 2e-16 seq11036 102 5e-16 seq291 102 5e-16 seq8380 100 2e-15 seq6 100 2e-15 seq19 93.3 3e-13 seq455 91.5 1e-12 seq10070 89.7 3e-12 seq324 89.7 3e-12 seq73 89.7 3e-12 seq26 89.7 3e-12 >seq259 Length=2316233 Score = 183 bits (202), Expect = 2e-40 Identities = 374/551 (68%), Gaps = 10/551 (2%) Strand=Plus/Plus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 || || || || || || || || || || |||||||| || | || |||| || Sbjct 1742894 GCCATAGGCATCGACTTGGGTACCACCTATTCTTGTGTAGGGGTGTTCCAGCATGGCAAG 1742953 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 || || || |||||||||||||| || || | || || || ||||| | || || Sbjct 1742954 GTGGAGATCATTGCCAATGACCAGGGCAACCGCACCACCCCCAGCTATGTGGCCTTCACG 1743013 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508 || || |||| |||||||| ||||| || ||| | || | || |||||| || Sbjct 1743014 GATACAGAACGGCTTATTGGGGATGCAGCCAAAAACCAGGTAGCCATGAATCCTCAGAAC 1743073 Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCT 474568 ||| | |||||||| ||| | ||||||| | || ||| ||||| | ||| || || Sbjct 1743074 ACTGTCTTTGATGCCAAACGTCTGATTGGCAGGAAATTTAATGATCCTGTTGTGCAGTCA 1743133 Query 474569 GATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAG-- 474626 |||||| | |||||||||| | ||||| |||| || || || || | | | Sbjct 1743134 GATATGAAACTTTGGCCTTTTCAAGTGATCAATGAAGGAGGCAAGCCCAAGGTGCTGGTG 1743193 Query 474627 --CAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTT 474684 | ||| | | || |||| ||| || | || ||| |||||||||||||||| || Sbjct 1743194 TCCTATAAAGG--GGAGAAA--AAAGCTTTCTACCCTGAAGAAATTTCTTCAATGGTATT 1743249 Query 474685 AGCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAA 474743 | || ||||| |||| || ||| | | | | || || | || |||| || | Sbjct 1743250 GACTAAGATGAAGGAAACTGCAGAG-GCTTTTTTAGGCCACCTGATCACCAATGCTGTGA 1743308 Query 474744 TTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAA 474803 | ||||| || || ||||| ||||| |||||||| || || || || ||||| || | Sbjct 1743309 TCACTGTACCGGCCTATTTCAATGACTCTCAACGCCAGGCCACCAAGGATGCAGGTGTGA 1743368 Query 474804 TTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATG 474863 ||||||| || ||||| || | || || |||||||| ||||| || || |||| |||| Sbjct 1743369 TTGCAGGACTCAATGTGCTAAGAATCATCAATGAACCCACAGCTGCTGCCATTGCGTATG 1743428 Query 474864 GTCTTGATAAG 474874 | | |||||| Sbjct 1743429 GCTTAGATAAG 1743439 Score = 143 bits (158), Expect = 2e-28 Identities = 544/841 (65%), Gaps = 16/841 (2%) Strand=Plus/Plus Query 475340 GAAGATGGTCTTTTCTCTGTAAGAGCAACAGCTGGAGATTCACATCTTGGTGGTGAAGAT 475399 || ||||| |||| |||| || |||||||| || | || || ||||| || || Sbjct 1743515 GATGATGGGATTTTTGAAGTAAAGGCTACAGCTGGGGACACCCACCTAGGTGGAGAGGAC 1743574 Query 475400 TTTGATAATAGACTTGT--ATCATGGTGTGTTGAAGATTTCAAGAGGAAA---AATAAAG 475454 || || || || ||||| | || | ||| || || ||||| |||||| || |||| Sbjct 1743575 TTCGACAACAGGCTTGTGAACCAC--TTTGTAGAGGAGTTCAAAAGGAAACACAAGAAAG 1743632 Query 475455 TTGATCTTTCAACATCTGCTAAAGCATTAAGACGTCTTAGAACTGCTTGTGAACGTGCTA 475514 ||| || | || | || | || ||| | | || ||||| || || || | Sbjct 1743633 AC-ATCAGCCAGAACAAGCGA--GCCGTGAGGCGTTTGCGTACCGCTTGCGAGCGAGCCA 1743689 Query 475515 AGCGAGCTCTTTCTTCTGCTACTCAAACTACTGTTGAAGTTGATTCTCTTTTTGAAGGAA 475574 || | | || || || || ||| | | | | ||| ||||||| |||| |||||| | Sbjct 1743690 AGAGGACCCTGTCATCCAGCACCCAAGCCAATCTGGAAATTGATTCACTTTATGAAGGCA 1743749 Query 475575 TTGATTATAATACTCTTATTACAAGGGCTAAATTTGAAGATATTTGTTCTGATCTCTTTA 475634 |||| | | || ||| || || || |||||||| | ||| | || || |||| Sbjct 1743750 TTGACTTCTACACATCTATCACCAGAGCCCGGTTTGAAGAGCTGTGTGCAGACCTGTTTA 1743809 Query 475635 GAAAAACAATTGAACCCGTTGAACAAGTTCTCAGAGATTCTAAACTTGACAAATCACAAG 475694 | || | ||||| || ||| ||| ||| ||||| | || | || || | || Sbjct 1743810 GGGGTACCCTGGAACCTGTGGAAAAAGCTCTTCGAGATGCCAAGATGGATAAGGCTAAAA 1743869 Query 475695 TCCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTCCAAAAATAAGAGAAA-TGCTT 475753 ||||||| |||||| | || || || || || | || || || | ||||| ||||| Sbjct 1743870 TCCATGACATTGTTTTAGTCGGGGGCTCCACTCGCATCCCTAAGGTGC-AGAAACTGCTT 1743928 Query 475754 TCATCA-TATTTTAATGGTAAAAAGTTAAATGAAAGTGTAAATCCTGATGAAGCTGTTGC 475812 || | ||||||||||| | | || | || | ||||||||||| || || || Sbjct 1743929 -CAGGACTATTTTAATGGACGTGATCTCAACAAGAGCATCAATCCTGATGAGGCAGTAGC 1743987 Query 475813 ATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAATCAGACGAGAAACTAAATAA 475872 ||||| ||||| || || ||||| ||||| ||| | | || || || | | Sbjct 1743988 CTATGGGGCTGCAGTACAGGCAGCCATTTTGATGGGTGACAAATCTGAAAAGGTACAGGA 1744047 Query 475873 TATTGTACTTGTT-GACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTA 475931 | || ||||| ||||| | || || || |||| | || |||| ||| || | | Sbjct 1744048 T-CTGCTTTTGTTGGACGTGGCCCCTCTGTCTCTAGGGTTAGAGACAGCTGGGGGCGTGA 1744106 Query 475932 TGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCA 475991 ||||| || ||| | | ||| | | ||||| || | || | | || ||| Sbjct 1744107 TGACTGTGCTGATTAAGCGTAATTCCACCATCCCCACTAAGCAGACACAGATCTTCACCA 1744166 Query 475992 CTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCA 476051 | ||||| ||||| ||| | || ||||| | | ||| |||||| | | | Sbjct 1744167 CATATTCAGATAACCAACCTGGGGTGCTGATCCAGGTATATGAGGGTGAACGGGCTATGA 1744226 Query 476052 CTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAG 476111 | || || ||| ||| || ||| | || || || |||||||| ||||| | Sbjct 1744227 CACGTGACAACAACCTACTGGGGCGCTTTGACCTGACTGGAATACCTCCTGCACCCAGGG 1744286 Query 476112 GAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTTACTG 476171 |||||||||| ||||| || || ||||| |||||||| ||||| ||||||||||| || | Sbjct 1744287 GAGTTCCTCAGATTGAGGTGACCTTTGACATTGATGCCAATGGAATTCTTAATGTCACAG 1744346 Query 476172 C 476172 | Sbjct 1744347 C 1744347 >seq362 Length=1080710 Score = 120 bits (132), Expect = 2e-21 Identities = 192/270 (71%), Gaps = 7/270 (3%) Strand=Plus/Plus Query 474642 AAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAA 474701 |||||||| |||| | || ||| |||||||| | ||| || | | ||||||||| | | Sbjct 903933 AAACTAAAACATTTGCTCCAGAAGAAATTTCTGCTATGATTCTCACTAAAATGAAAGAGA 903992 Query 474702 CCGCGAGCTCATATCTTGGACAAGAAG-TAACTGATGCAGTAATTACTGTTCCAGCATAT 474760 | | | | ||| | || ||||| | || ||||| | | |||| |||| ||| Sbjct 903993 CTGTGGAGGCTTATTTGTGA--AGAAGGTTACCCATGCAATTGTCACTGAACCAGTCTAT 904050 Query 474761 TTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTT 474820 ||||||||| | || | |||||||| |||||||| |||| ||||| || || |||||| Sbjct 904051 TTTAATGATGC-CAGTGGCAAGCAACCAAAGATGCTGGAACTATTGCTGGCCTGAATGTT 904109 Query 474821 TTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGAATTCT 474880 | | || || ||||| || |||||||| || |||||||| | || ||||||| Sbjct 904110 ATGAGGATCATCAATGAGCCTACAGCAGCTGCTATTGCTTATTGCCTGTATAAGAAGGAG 904169 Query 474881 GACAAAGAAGTAAATGTTTTAATCTTTGAT 474910 || ||||||| || || | || |||||| Sbjct 904170 GA-AAAGAAG--AACATTCTGATGTTTGAT 904196 Score = 107 bits (118), Expect = 1e-17 Identities = 167/235 (71%), Gaps = 4/235 (2%) Strand=Plus/Plus Query 474642 AAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAA 474701 |||||||| |||| | || ||| |||| ||| | ||| || | | ||||||||| | | Sbjct 312913 AAACTAAAACATTTGCTCCAGAAGAAATCTCTGCTATGATTCTCACTAAAATGAAAGAGA 312972 Query 474702 CCGCGAGCTCATATCTTGGACAAGAAG-TAACTGATGCAGTAATTACTGTTCCAGCATAT 474760 | ||| | ||| | || ||||| | || ||||| | ||||| |||| ||| Sbjct 312973 CTGCGGAGGCTTATTTGTGA--AGAAGGTTACCCATGCAATTGTTACTAAACCAGTCTAT 313030 Query 474761 TTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTT 474820 ||||||||| | || | |||||||| |||||||| |||| ||||| | || |||||| Sbjct 313031 TTTAATGATGC-CAGTGGCAAGCAACCAAAGATGCTGGAACTATTGCTTGCCTGAATGTT 313089 Query 474821 TTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGA 474875 | || || ||||| || |||||||| || |||||||| | || ||| ||| Sbjct 313090 ATGAAGATCATCAATGAGCCTACAGCAGCTGCTATTGCTTATTGCCTGGATCAGA 313144 >seq1181 Length=43409 Score = 111 bits (122), Expect = 1e-18 Identities = 168/235 (71%), Gaps = 13/235 (6%) Strand=Plus/Plus Query 474642 AAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAA 474701 ||||||| |||| | || ||| |||| ||| | || |||| ||||||||||| | Sbjct 13049 AAACTAACACATTTGCTCCAGAAGAAATCTCTGCTATAATTTTCACCAAAATGAAAAA-- 13106 Query 474702 CCGCGAGCTCATATCTTGGACAAGAA-GTAACTGATGCAGTAATTACTGTTCCAGCATAT 474760 ||| || |||| ||||| || || ||||||| |||||| |||| ||| Sbjct 13107 -----GGCTTAT---TTGG-GAAGAAGGTTACCCATGCAGTTGTTACTGAACCAGTGTAT 13157 Query 474761 TTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTT 474820 ||||||||| | || | ||||||| |||||||| |||| ||||| | || |||||| Sbjct 13158 TTTAATGATGC-CAGTGGGAAGCAACCAAAGATGCTGGAACTATTGCTAGCCTGAATGTT 13216 Query 474821 TTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGA 474875 | | || || ||||| || |||||||| || |||||||| | || ||||||| Sbjct 13217 ATGAGGATCATCAATGAGCCTACAGCAGCTGCTATTGCTTATTGCCTGGATAAGA 13271 Score = 87.8 bits (96), Expect = 1e-11 Identities = 149/212 (70%), Gaps = 13/212 (6%) Strand=Plus/Plus Query 474642 AAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAA 474701 ||||||| |||| | | ||| |||| ||| | || || | ||||||||||| | Sbjct 12068 AAACTAACACATTTGCTCTAGAAGAAATCTCTGCTATAATTCTCACCAAAATGAAAGAG- 12126 Query 474702 CCGCGAGCTCATATCTTGGACAAGAA-GTAACTGATGCAGTAATTACTGTTCCAGCATAT 474760 ||| || |||| ||||| || || ||||||| |||||| |||| ||| Sbjct 12127 ------GCTTAT---TTGGG-AAGAATGTTACCCATGCAGTTGTTACTGAACCAGTCTAT 12176 Query 474761 TTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTT 474820 ||||||||| | || | ||||||| |||||||| |||| ||||| || || |||||| Sbjct 12177 TTTAATGATGC-CAGTGGGAAGCAACCAAAGATGCTGGAACTATTGCTGGCCTGAATGTT 12235 Query 474821 TTACGTATTATTAATGAACCAACAGCAGCCGC 474852 | | || || ||||| || |||||||| || Sbjct 12236 ATGAGGATCATCAATGAGCCTACAGCAGCTGC 12267 >seq487 Length=469708 Score = 104 bits (114), Expect = 2e-16 Identities = 155/215 (72%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 474663 AACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGA 474721 || |||||||| ||| |||| | | ||||||| | || || ||| | ||| | ||| Sbjct 325185 AAGAAATTTCTGGTATGATTTTCACTATAATGAAAGAGACTGCTGAGG-CTTATTTGGGA 325127 Query 474722 CAAGAAGTA-ACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCA 474780 ||||||| || ||||||| |||| || ||||| |||||||||||| || | || Sbjct 325126 -AAGAAGTTTACGCATGCAGTTGTTACAGTACCAGCCTATTTTAATGATGGCCAGCAACA 325068 Query 474781 AGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACC 474840 |||||| |||||||| ||| ||||| | || || ||| | | || || ||||| || Sbjct 325067 AGCAACCAAAGATGCTAGAACTATTGCTGTCCTGAAAGTTATGAGAATCATCAATGAGCC 325008 Query 474841 AACAGCAGCCGCACTTGCTTATGGTCTTGATAAGA 474875 |||||||| | || ||||| | || ||||||| Sbjct 325007 TACAGCAGCTCCTATTACTTATAGCCTGGATAAGA 324973 Score = 95.1 bits (104), Expect = 8e-14 Identities = 194/286 (68%), Gaps = 2/286 (1%) Strand=Plus/Minus Query 475877 GTACTTGTTGACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACT 475936 ||||| |||| ||| | | || || | ||| ||||||| || ||||| | ||||| Sbjct 324379 GTACTGTTTGAAGTATGTACCCTGACACTTGGTATTGAAACTGTGGGAGGTGTCATGACC 324320 Query 475937 AATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTAT 475996 || || || | || || | | | || |||||| || | | ||||| || | Sbjct 324319 AAGCTGATAGCAAGGAACAATGTGGTACCTACCAAAAAGTCTCAGATCTTTTCTACAGCT 324260 Query 475997 TCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAA 476056 |||||||| ||| | ||||| | ||| | ||| ||||||| || | | | ||| Sbjct 324259 TCTGATAAGCAACCTACTGTTCCAATCAAGGTCTATGAAGGTAAATAACCCCTGAAAAAA 324200 Query 476057 GATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTC-CCAGAGGAGT 476115 || | || || | || ||| |||| || ||||||||||||| |||| || || Sbjct 324199 GACACCCACCTTCTGAGTACATTTTATCTCACTGGAATTCCTCCTGCTCTCCAG-GGGGT 324141 Query 476116 TCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTT 476161 ||||| |||||||| |||||||| || |||| ||||||||| || Sbjct 324140 CCCTCAGATTGAAGTCACTTTTGAGATAGATGTGAATGGTATTTTT 324095 >seq74 Length=8649107 Score = 104 bits (114), Expect = 2e-16 Identities = 108/142 (76%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794 |||| || | || || ||||| || || ||||||||||| ||||| ||||| ||||||| Sbjct 7579834 ATGCTGTGGTCACAGTGCCAGCTTACTTCAATGATTCTCAGCGTCAGGCAACCAAAGATG 7579775 Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854 | |||| ||||| ||||| ||||| | | || || ||||| ||||| || || || Sbjct 7579774 CCGGAACCATTGCTGGTCTCAATGTACTTAGGATAATCAATGAGCCAACTGCTGCTGCTA 7579715 Query 474855 TTGCTTATGGTCTTGATAAGAA 474876 ||||||| ||| | || ||||| Sbjct 7579714 TTGCTTACGGTTTGGACAAGAA 7579693 Score = 96.9 bits (106), Expect = 2e-14 Identities = 95/123 (77%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 476051 ACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGA 476110 || || ||||| ||| |||||| | ||| | || ||| || || ||||| ||| | Sbjct 7578392 ACCAAGGATAACAACCTACTTGGCAAGTTTGAACTCACAGGCATACCCCCTGCACCCCGT 7578333 Query 476111 GGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTTACT 476170 || |||||||| |||||||| || |||||||||||||| ||||| || || |||||| || Sbjct 7578332 GGTGTTCCTCAGATTGAAGTCACATTTGATATTGATGCCAATGGCATCCTGAATGTTTCT 7578273 Query 476171 GCT 476173 ||| Sbjct 7578272 GCT 7578270 Score = 95.1 bits (104), Expect = 8e-14 Identities = 120/165 (73%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 474328 TGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAA 474387 |||| |||| |||||| | || || || ||| |||||| | ||| | || |||| || Sbjct 7580743 TGCAGTTGGCATTGATCTTGGCACCACCTACTCTTGTGTGGGTGTCTTCCAGCATGGAAA 7580684 Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447 ||| || |||||||||||||| || || || |||| || ||| ||||| | ||||| Sbjct 7580683 AGTGGAGATAATTGCCAATGATCAGGGGAACCGAACTACCCCAAGCTATGTCGCCTTTAC 7580624 Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGC 474492 ||| || |||| | || || |||||||| || |||| | ||| Sbjct 7580623 TGACACAGAACGATTGATCGGCGATGCTGCAAAGAATCAGGTTGC 7580579 >seq11036 Length=1096 Score = 102 bits (112), Expect = 5e-16 Identities = 97/123 (79%), Gaps = 1/123 (1%) Strand=Plus/Plus Query 474753 CAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTC 474812 |||| |||||||||||| | || | |||||||| |||||||| |||| ||||| || | Sbjct 1 CAGCCTATTTTAATGATGC-CACTGGCAAGCAACCAAAGATGCTGGAACTATTGCTGGCC 59 Query 474813 TTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATA 474872 | |||||| | | || || ||||| || |||||||| || |||||||||| || |||| Sbjct 60 TGAATGTTATGAGAATCATCAATGAGCCTACAGCAGCTGCTATTGCTTATGGCCTGGATA 119 Query 474873 AGA 474875 ||| Sbjct 120 AGA 122 Score = 95.1 bits (104), Expect = 8e-14 Identities = 276/418 (66%), Gaps = 24/418 (6%) Strand=Plus/Plus Query 475791 TAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTC 475850 |||| || ||||| |||||||||||||| | | ||||||| || | | | | | | | Sbjct 633 TAAACCCAGATGAGGCTGTTGCATATGGTGATACTGTCCAGGCTGGTGTACTCTTTGAT- 691 Query 475851 AATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTC 475910 |||| ||| || | || | | ||||| |||| ||| ||| | || | ||| Sbjct 692 GATCA----AGATAC-AGATGACCTAGTACTGCTTGATGTATGTCCCGTGACACTTGGTA 746 Query 475911 TTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCA 475970 ||||||| || ||||| | |||| || || || || || ||| | || || Sbjct 747 TTGAAACTGTGGGAGGTGTCGTGACCAAACTGATACCAAGGAACACTGTGGTACCCACCA 806 Query 475971 AAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCT 476030 | || || | | ||||| || ||||||||||||| | ||||| | ||| || ||| Sbjct 807 AGAAGTCTCAGATCTTTTCTACAGCTTCTGATAATCAACCTACTGTTCCAATCAAAGTCT 866 Query 476031 TTGAAGGTGAAAGAAAATTCACT-AAAGATAATAACAAACTT---GGAACTTTTAATCTT 476086 ||||| | |||||| | || ||| | | ||| | ||| || || ||| |||| Sbjct 867 ATGAAGAT-AAAGAA---CCCCTGAAAAAAGACAACCACCTTCCAGGTACATTTGATCTC 922 Query 476087 GAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGAT 476146 || ||||||||| | || || || || |||||||| |||||||| || ||| Sbjct 923 ACTGGAATTCCTCCT-------GTGGGGTCCCCCAGATTGAAGTCACTTTTGAGATAGAT 975 Query 476147 GCAAATGGTATTCTTAATGTTACTGCTTGTGATAAATCTAGTAACAAGAGTAAAAATA 476204 | |||| ||||||| | || ||| |||||| |||| |||| ||||||| Sbjct 976 GTGAATGTTATTCTTTGGGCAACAGCTGAAGATAAA---GGTAAAAAGAACAAAAATA 1030 >seq291 Length=1898989 Score = 102 bits (112), Expect = 5e-16 Identities = 165/235 (70%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 474642 AAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAA 474701 ||||||| ||| | || ||| |||||||| | || || | | ||||| ||| | | Sbjct 881096 AAACTAAGACCTTTGCTCCAGAATAAATTTCTGCTATAATTCTCACTAAAATAAAAGATA 881037 Query 474702 CCGCGAGCTCATATCTTGGACAAGAAG-TAACTGATGCAGTAATTACTGTTCCAGCATAT 474760 | || | | ||| | ||| |||||| | || ||||||| ||||||| | |||||| Sbjct 881036 CTGCTCACACTTATTTGGGA-AAGAAGATTACCTATGCAGTTGTTACTGTAACGGCATAT 880978 Query 474761 TTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTT 474820 ||||| ||| | || | || ||| |||||| | |||| ||||| || || ||||| Sbjct 880977 TTTAAAGATGCCCAGTGGCAGTCAAGCAAAGATTCTGGAACTATTGCTGGCCTGAATGTA 880918 Query 474821 TTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGA 474875 | | || |||| ||| || |||||||| || ||||||| |||| | ||||| Sbjct 880917 ATGAGGATCATTACTGAGCCTACAGCAGCTGCTACTGCTTATCGTCTGGTTAAGA 880863 >seq8380 Length=1491 Score = 100 bits (110), Expect = 2e-15 Identities = 116/154 (75%), Gaps = 2/154 (1%) Strand=Plus/Minus Query 474723 AAGAAG-TAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAA 474781 |||||| | || |||| || |||||| |||| |||||||||||| | || | || Sbjct 462 AAGAAGGTTACCCATGCGGTTGTTACTGAACCAGTCTATTTTAATGATAC-CAGTGGGAA 404 Query 474782 GCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCA 474841 ||||| |||||||| |||| ||||| || || |||||| | | || || ||||| || Sbjct 403 GCAACCAAAGATGCTGGAACTATTGCTGGCCTGAATGTTATGAGGATCATCAATGAGCCT 344 Query 474842 ACAGCAGCCGCACTTGCTTATGGTCTTGATAAGA 474875 |||||||| || |||||||| | || ||||||| Sbjct 343 ACAGCAGCTGCTATTGCTTATTGCCTGGATAAGA 310 >seq6 Length=30479472 Score = 100 bits (110), Expect = 2e-15 Identities = 114/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||| |||||||| |||||||| || || | ||| ||||||||||||||||||||||| Sbjct 3763684 ATCTTCCAGTTGCTTACCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTT 3763625 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 || || ||||| ||| || ||| |||| || | | || || || || |||| Sbjct 3763624 ATCCTGGATCTTGGCTTTTGCATTTTCTGTAGTGTCCGAGGGTTCAGCCTCCAGCGTAAC 3763565 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| || || || || || || | |||||| || Sbjct 3763564 AGTCTTCCCTGTAAGGGTTTTTATGAAAATCTG 3763532 >seq19 Length=19581918 Score = 93.3 bits (102), Expect = 3e-13 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794 ||||||| ||||||| ||||| |||||||||||| | || || |||||||| ||||||| Sbjct 13351163 ATGCAGTTGTTACTGTACCAGCCTATTTTAATGATGCCCAGCGGCAAGCAACCAAAGATG 13351104 Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACC 474840 | |||| ||||| || || |||||| | | || || ||||| || Sbjct 13351103 CTGGAACTATTGCTGGCCTGAATGTTATGAGGATCATCAATGAGCC 13351058 >seq455 Length=570085 Score = 91.5 bits (100), Expect = 1e-12 Identities = 115/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 480553 GAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTC 480612 |||| | || ||||||||||| || || || ||| || || |||| | || | Sbjct 193678 GAAGCCTCAGAACAAGATGAAGGGTGGACTCCTTCTAAATGTTGTAGTCAGACAAGGTAC 193619 Query 480613 TGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTT 480672 |||||| |||||||| |||||||| || |||| ||| ||||||||||||||||||| Sbjct 193618 GTCCATCTTCTAGTTGCTTACCAGCAAAGATCAGACTTTGCTGATCAGGAGGAATTCCTT 193559 Query 480673 CCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTA 480710 |||| | || ||||| ||| | | ||| |||||| Sbjct 193558 CCTTATTCTGGATCTTGGCTTTTATATTTTCTATAGTA 193521 >seq10070 Length=1232 Score = 89.7 bits (98), Expect = 3e-12 Identities = 113/153 (74%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 474723 AAGAAG-TAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAA 474781 |||||| | || | ||||| |||||| ||| |||||||||||| | || || Sbjct 930 AAGAAGGTTACCCACGCAGTTGTTACTGAACCAATCTATTTTAATGATGC-CAGTTGGAA 988 Query 474782 GCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCA 474841 ||||| |||||||| |||| ||||| || || |||||| | | || || ||||| || Sbjct 989 GCAACCAAAGATGCTGGAACTATTGCTGGCCTGAATGTTATGAGAATCATCAATGAGCCT 1048 Query 474842 ACAGCAGCCGCACTTGCTTATGGTCTTGATAAG 474874 |||||||| || |||||||| | || |||||| Sbjct 1049 ACAGCAGCTGCTATTGCTTATTGCCTGGATAAG 1081 >seq324 Length=1494514 Score = 89.7 bits (98), Expect = 3e-12 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 627769 CCATCACGTCCTGCTCTACCTATTTCTTGATAATAACCTTCGATATTTTTAGGTGCGCCA 627828 |||||||| || |||||||| ||||| |||||||| ||| || | |||||| || ||| Sbjct 949366 CCATCACGGCCAGCTCTACCAATTTCCTGATAATATGATTCCATTTCTTTAGGAGCACCA 949307 Query 627829 TAATGTATTACTGCTCTCACATCTGATTTATTAATACCCATTCCAAATGCAATTGTTGC 627887 ||||| || ||| | | || | ||||||||| ||||||||||| || || || || Sbjct 949306 TAATGAATGACTCTGCGAATGTCAGCTTTATTAATGCCCATTCCAAAAGCTATAGTAGC 949248 >seq73 Length=8706776 Score = 89.7 bits (98), Expect = 3e-12 Identities = 114/155 (74%), Gaps = 3/155 (2%) Strand=Plus/Minus Query 480616 TATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCT 480675 ||||||| |||||||| ||||||| || | | | |||||||||||||||||||||| | Sbjct 2651702 TATCTTCCAGTTGCTTACCAGCAACGATCAATCTTGGTTGATCAGGAGGAATTCCTTCGT 2651643 Query 480676 TGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTG-TGAAGTTTCAAGGGTA 480734 | || || ||||| ||| | | ||| ||||| || | | | | || ||| | | || Sbjct 2651642 TATCCTGGATCTTGGCTTTTATATTTTCTATAGTGTCCGAGGGTTCAACTTTGA--GCTA 2651585 Query 480735 ATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| || || || || || || | |||||| || Sbjct 2651584 ATAGTCTTCCCCGTAAGGGTTTTTATGAAAATCTG 2651550 >seq26 Length=15501076 Score = 89.7 bits (98), Expect = 3e-12 Identities = 112/153 (73%), Gaps = 3/153 (2%) Strand=Plus/Plus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||| |||||||| ||||||| || || | ||| |||| |||||||||||||||||| Sbjct 10001887 ATCTTCCAGTTGCTTATCAGCAAAGATTAGTCTTTGATGATTAGGAGGAATTCCTTCCTT 10001946 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 || || ||||| || ||| ||| |||||||| | || | || | ||||| Sbjct 10001947 ATCCTGGATCTTGGCCTTTACATTTTCTATAGTATCTG---GTTCAACCTCCATTGTAAT 10002003 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| || | || || || || |||||||| || Sbjct 10002004 AGTCTTCTCTGTAAGGGTTTTTACGAAAATCTG 10002036 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3267643743562484