Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ictidomys_20tridecemlineatus_20[refseq_20GCF_5F000236235.1_202011-
11-29] 12,483 sequences; 2,478,393,770 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq203 228 1e-53
seq112 215 8e-50
seq667 210 3e-48
seq59 100 5e-15
seq31 96.9 5e-14
>seq203
Length=3504862
Score = 228 bits (252), Expect = 1e-53
Identities = 204/256 (80%), Gaps = 0/256 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||| || ||||||||| ||||||| || ||| |||
Sbjct 2014809 TGTACTTGGTGACCGCCTTGGTGCCCTCCGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 2014750
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| |||||||||||| ||||||||||| |||| ||| || ||||||||| |
Sbjct 2014749 GCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGATGGTCGAGCGCTTGTTGTAGT 2014690
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||||||| ||||||| ||||||| |||| |||||||| |||||||||||||
Sbjct 2014689 GCGCCAGGCGCGAGGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTCACAAACGAGTTCA 2014630
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| ||||||||| |||||||||||||||||||||||||||||
Sbjct 2014629 TGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGGGTGCACCTGCTTGAGCACCTTGT 2014570
Query 1485710 AAACAAAGGACGAGTA 1485725
| || || ||||||
Sbjct 2014569 ACACGTAGACCGAGTA 2014554
Score = 219 bits (242), Expect = 7e-51
Identities = 202/256 (79%), Gaps = 0/256 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||| || ||||||||| ||||||| || ||| |||
Sbjct 1994715 TGTACTTGGTGACCGCCTTGGTGCCCTCCGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 1994656
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| ||||||||| || ||||||||||| |||| ||| || ||||||||| |
Sbjct 1994655 GCAGCAGGCGCACCGCCGTCTGGATCTCCCGGGACGTGATGGTCGAGCGCTTGTTGTAGT 1994596
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||||||| ||||||| ||||||| |||| |||||||| |||||||||||||
Sbjct 1994595 GCGCCAGGCGCGAGGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTCACAAACGAGTTCA 1994536
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| |||||||| |||||||||||||||||||||||||||||
Sbjct 1994535 TGATGCCCATGGCCTTGGACGAGATGCCAGTGTCGGGGTGCACCTGCTTGAGCACCTTGT 1994476
Query 1485710 AAACAAAGGACGAGTA 1485725
| || || ||||||
Sbjct 1994475 ACACGTAGACCGAGTA 1994460
Score = 219 bits (242), Expect = 7e-51
Identities = 202/256 (79%), Gaps = 0/256 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||| || ||||||||| ||||||| || ||| |||
Sbjct 3146146 TGTACTTGGTGACCGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 3146087
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| ||||||||| || ||||||||||| |||| ||| || ||||||||| |
Sbjct 3146086 GCAGCAGGCGCACCGCCGTCTGGATCTCCCGGGACGTGATGGTCGAGCGCTTGTTGTAGT 3146027
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||||||| ||||||| ||||||| |||| ||||||||||| ||||||||||
Sbjct 3146026 GCGCCAGGCGCGAGGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTGACGAACGAGTTCA 3145967
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| |||||||| |||||||||||||||||||||||||||||
Sbjct 3145966 TGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGTGCACCTGCTTGAGCACCTTGT 3145907
Query 1485710 AAACAAAGGACGAGTA 1485725
| || || ||||||
Sbjct 3145906 ACACGTAGACCGAGTA 3145891
Score = 214 bits (236), Expect = 3e-49
Identities = 201/256 (79%), Gaps = 0/256 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||| || ||||||||| ||||||| || ||| |||
Sbjct 3162668 TGTACTTGGTGACCGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 3162727
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| ||||||||| || ||||||||||| |||| ||| || ||||||||| |
Sbjct 3162728 GCAGCAGGCGCACCGCCGTCTGGATCTCCCGGGACGTGATGGTCGAGCGCTTGTTGTAGT 3162787
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||||||| ||||||| ||||||| |||| |||||||| || ||||||||||
Sbjct 3162788 GCGCCAGGCGCGAGGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTCACGAACGAGTTCA 3162847
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| |||||||| |||||||||||||||||||||||||||||
Sbjct 3162848 TGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGTGCACCTGCTTGAGCACCTTGT 3162907
Query 1485710 AAACAAAGGACGAGTA 1485725
| || || ||||||
Sbjct 3162908 ACACGTAGACCGAGTA 3162923
Score = 210 bits (232), Expect = 3e-48
Identities = 193/244 (79%), Gaps = 0/244 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||| || ||||||||| ||||||| || ||| |||
Sbjct 1965067 TGTACTTGGTGACCGCCTTGGTGCCCTCCGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 1965126
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| ||||||||| || ||||||||||| |||| ||| || ||||||||| |
Sbjct 1965127 GCAGCAGGCGCACCGCCGTCTGGATCTCCCGGGACGTGATGGTCGAGCGCTTGTTGTAGT 1965186
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||||||| ||||||| ||||||| |||| |||||||| || ||||||||||
Sbjct 1965187 GCGCCAGGCGCGAGGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTCACGAACGAGTTCA 1965246
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| |||||||| |||||||||||||||||||||||||||||
Sbjct 1965247 TGATGCCCATGGCCTTGGACGAGATGCCAGTGTCGGGGTGCACCTGCTTGAGCACCTTGT 1965306
Query 1485710 AAAC 1485713
| ||
Sbjct 1965307 ACAC 1965310
Score = 210 bits (232), Expect = 3e-48
Identities = 193/244 (79%), Gaps = 0/244 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| || || || ||||||||| ||||||| || ||| |||
Sbjct 2062789 TGTACTTGGTGACAGCCTTGGTGCCTTCCGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 2062730
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| |||||||||||| ||||||||||| |||| ||| || ||||||||| |
Sbjct 2062729 GCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGATGGTCGAGCGCTTGTTGTAGT 2062670
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||||||| ||||||| ||||||| |||| |||||||| || ||||||||||
Sbjct 2062669 GCGCCAGGCGCGAGGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTCACGAACGAGTTCA 2062610
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| |||||||| |||||||||||||||||||||||||||||
Sbjct 2062609 TGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGTGCACCTGCTTGAGCACCTTGT 2062550
Query 1485710 AAAC 1485713
| ||
Sbjct 2062549 ACAC 2062546
Score = 210 bits (232), Expect = 3e-48
Identities = 193/244 (79%), Gaps = 0/244 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||| || || |||||| ||||||| |||||| |||
Sbjct 2073367 TGTACTTGGTGACAGCCTTGGTGCCCTCCGACACCGCGTGCTTGGCCAGCTCGCCGGGCA 2073308
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| ||||||||| || ||||||||||| | || ||| || ||||||||| |
Sbjct 2073307 GCAGCAGGCGCACCGCCGTCTGGATCTCCCTGGACGTGATGGTCGAGCGCTTGTTGTAGT 2073248
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||||||| ||||||| | ||||||| |||| |||||||| || ||||||||||
Sbjct 2073247 GCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGATGTCGTTCACGAACGAGTTCA 2073188
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| |||||||| |||||||||||||||||||||||||||||
Sbjct 2073187 TGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGTGCACCTGCTTGAGCACCTTGT 2073128
Query 1485710 AAAC 1485713
| ||
Sbjct 2073127 ACAC 2073124
Score = 210 bits (232), Expect = 3e-48
Identities = 193/244 (79%), Gaps = 0/244 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||| || ||||||||| ||||||| || ||| |||
Sbjct 2798367 TGTACTTGGTGACCGCCTTGGTGCCCTCCGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 2798426
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| ||||||||| || ||||||||||| |||| ||| || ||||||||| |
Sbjct 2798427 GCAGCAGGCGCACCGCCGTCTGGATCTCCCGGGACGTGATGGTCGAGCGCTTGTTGTAGT 2798486
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||||||| ||||||| ||||||| |||| |||||||| || ||||||||||
Sbjct 2798487 GCGCCAGGCGCGAGGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTCACGAACGAGTTCA 2798546
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| |||||||| |||||||||||||||||||||||||||||
Sbjct 2798547 TGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGTGCACCTGCTTGAGCACCTTGT 2798606
Query 1485710 AAAC 1485713
| ||
Sbjct 2798607 ACAC 2798610
Score = 210 bits (232), Expect = 3e-48
Identities = 199/254 (78%), Gaps = 0/254 (0%)
Strand=Plus/Minus
Query 1485472 TACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATG 1485531
||||||||||| |||||||| ||||| || ||||| ||| ||||||| || ||| |||
Sbjct 3135783 TACTTGGTGACCGCCTTGGTGCCCTCGGACACGGCATGCTTGGCCAGCTCCCCGGGCAGC 3135724
Query 1485532 ATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGC 1485591
| |||||||||||| ||||||||||| |||| ||| || ||||||||| | ||
Sbjct 3135723 AGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGATGGTCGAGCGCTTGTTGTAGTGC 3135664
Query 1485592 GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATG 1485651
|||||||| ||||||| ||||||| |||| |||||||| || ||||||||||||
Sbjct 3135663 GCCAGGCGCGAGGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTCACGAACGAGTTCATG 3135604
Query 1485652 ATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAA 1485711
|| ||| | ||| |||||||| ||||||||||||||||||||||||||||||
Sbjct 3135603 ATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGTGCACCTGCTTGAGCACCTTGTAT 3135544
Query 1485712 ACAAAGGACGAGTA 1485725
||| || |||||
Sbjct 3135543 ACATAGATGGAGTA 3135530
Score = 206 bits (228), Expect = 4e-47
Identities = 198/254 (78%), Gaps = 0/254 (0%)
Strand=Plus/Plus
Query 1485472 TACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATG 1485531
|| |||||||| |||||||| ||||| || ||||||||| ||||||| || ||| |||
Sbjct 1900181 TATTTGGTGACCGCCTTGGTGCCCTCCGACACGGCGTGCTTGGCCAGCTCCCCGGGCAGC 1900240
Query 1485532 ATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGC 1485591
| ||||||||| || ||||||||||| |||| ||| || ||||||||| | ||
Sbjct 1900241 AGCAGGCGCACCGCCGTCTGGATCTCCCGGGACGTGATGGTCGAGCGCTTGTTGTAGTGC 1900300
Query 1485592 GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATG 1485651
|||||||| ||||||| ||||||| |||| |||||||| || ||||||||||||
Sbjct 1900301 GCCAGGCGCGAGGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTCACGAACGAGTTCATG 1900360
Query 1485652 ATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAA 1485711
|| ||| | ||| |||||||| ||||||||||||||||||||||||||||||
Sbjct 1900361 ATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGTGCACCTGCTTGAGCACCTTGTAT 1900420
Query 1485712 ACAAAGGACGAGTA 1485725
||| || |||||
Sbjct 1900421 ACATAGATGGAGTA 1900434
Score = 197 bits (218), Expect = 2e-44
Identities = 190/244 (78%), Gaps = 0/244 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||| || || |||||||| ||||| || || |||||| ||||||| || ||| |||
Sbjct 2027288 TGTACTTAGTAACTGCCTTGGTGCCCTCCGACACCGCGTGCTTGGCCAGCTCCCCGGGCA 2027347
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| ||||||||| || ||||||||||| |||| ||| || ||||||||| |
Sbjct 2027348 GCAGCAGGCGCACCGCCGTCTGGATCTCCCGGGACGTGATGGTCGAGCGCTTGTTGTAGT 2027407
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||||||| ||||||| ||||||| |||| |||||||| || ||||||||||
Sbjct 2027408 GCGCCAGGCGCGAGGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTCACGAACGAGTTCA 2027467
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| |||||||| |||||||||||||||||||||||||||||
Sbjct 2027468 TGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGTGCACCTGCTTGAGCACCTTGT 2027527
Query 1485710 AAAC 1485713
| ||
Sbjct 2027528 ACAC 2027531
Score = 192 bits (212), Expect = 9e-43
Identities = 187/241 (78%), Gaps = 0/241 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| ||||||| ||||| || | ||||||| ||||||| || ||| |||
Sbjct 2026952 TGTACTTGGTGACCTCCTTGGTGCCCTCCGACAAGGCGTGCTTGGCCAGCTCCCCGGGCA 2026893
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| || |||||| || ||||||||||| |||| ||| || ||||||||| |
Sbjct 2026892 GCAGCAAGCGCACCGCCGTCTGGATCTCCCGGGACGTGATGGTCGAGCGCTTGTTGTAGT 2026833
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||||||| ||||||| ||||||| |||| |||||||| || ||||||||||
Sbjct 2026832 GCGCCAGGCGCGAGGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTCACGAACGAGTTCA 2026773
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| |||||||| || ||||||||||||||||||||||||||
Sbjct 2026772 TGATGCCCATGGCCTTGGACGAGATGCCGGTGTTGGGGTGCACCTGCTTGAGCACCTTGT 2026713
Query 1485710 A 1485710
|
Sbjct 2026712 A 2026712
Score = 188 bits (208), Expect = 1e-41
Identities = 188/244 (77%), Gaps = 0/244 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||| || || |||||| ||||||| || ||| | |
Sbjct 2815606 TGTACTTGGTGACAGCCTTGGTGCCCTCGGACACCGCGTGCTTGGCCAGCTCCCCGGGGA 2815665
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| ||||||||| || ||||||||||| |||| ||| || ||||||||| |
Sbjct 2815666 GCAGCAGGCGCACCGCCGTCTGGATCTCCCGGGACGTGATGGTCGAGCGCTTGTTGTAGT 2815725
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||||||| ||||||| | || || || | ||||||||||| ||||||||||
Sbjct 2815726 GCGCCAGGCGCGAGGCCTCGCCTGCAATACGCTCAAAGATGTCGTTGACGAACGAGTTCA 2815785
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| |||||||| |||||||||||||||||| ||||||||||
Sbjct 2815786 TGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGTGCACCTGCTTAAGCACCTTGT 2815845
Query 1485710 AAAC 1485713
| ||
Sbjct 2815846 ACAC 2815849
Score = 165 bits (182), Expect = 1e-34
Identities = 181/241 (75%), Gaps = 0/241 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||| |||||||| |||||||| ||||| || ||||||||| ||||||| || || |||
Sbjct 1717147 TGTATTTGGTGACCGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCCCCAGGCA 1717088
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| ||||||||| |||||||||||||| |||| ||| || ||||||||| |
Sbjct 1717087 GTAGCAGGCGCACCGCGGTCTGGATCTCCCGGGACGTGATGGTCGAGCGCTTGTTGTAGT 1717028
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||||||| |||||| | || || || | ||||| |||| || || ||||
Sbjct 1717027 GCGCCAGGCGCGACGCCTCGCCAGCTATCCGTTCAAATATGTCAGTGACGAAGGAATTCA 1716968
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | || ||||||||| ||| |||||||||||||| ||||||||||
Sbjct 1716967 TGATGCTCATGGCCTTCGAGGAGATGCCTGTGTCAGGGTGCACCTGCTTCAGCACCTTGT 1716908
Query 1485710 A 1485710
|
Sbjct 1716907 A 1716907
Score = 100 bits (110), Expect = 5e-15
Identities = 130/180 (72%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||| || ||||||| |||| | | | |||| | ||||| || |||
Sbjct 1724254 TGTACTTGGTGGCGACCTTGGTGTCCTCGGGCCCCGAGTGCTTAGCCAGCTCAGGAGGCA 1724313
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| |||||||| ||| ||||||||||| |||| ||| || ||||||||| |
Sbjct 1724314 GCAGCAGGCGCATGGCCGTCTGGATCTCCCGGGACGTGATGGTCGAGCGCTTGTTGCAGT 1724373
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||||||| ||||||| ||||||| |||| ||||| ||||| |||| ||||
Sbjct 1724374 GCGCCAGGCGCGAGGCCTCGCCCGCGATGCGCTCGAAGATGTCCTTGACGAACGTATTCA 1724433
>seq112
Length=6271480
Score = 215 bits (238), Expect = 8e-50
Identities = 194/244 (80%), Gaps = 0/244 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||| || ||||||||| ||||||| || ||| |||
Sbjct 185070 TGTACTTGGTGACCGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 185011
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| ||||||||| || ||||||||||| || | ||| || ||||||||| |
Sbjct 185010 GCAGCAGGCGCACCGCCGTCTGGATCTCCCGCGACGTGATGGTCGAGCGCTTGTTGTAGT 184951
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
||||||||||| |||||| | ||||||| |||| ||||||||||| ||||||||||
Sbjct 184950 GCGCCAGGCGGGACGCCTCGCCGGCGATGCGCTCGAAGATGTCGTTGACGAACGAGTTCA 184891
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| ||||||||| |||||||||||||||||| ||||||||||
Sbjct 184890 TGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 184831
Query 1485710 AAAC 1485713
| ||
Sbjct 184830 ACAC 184827
Score = 215 bits (238), Expect = 8e-50
Identities = 194/244 (80%), Gaps = 0/244 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||| || ||||||||| ||||||| || ||| |||
Sbjct 220132 TGTACTTGGTGACCGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 220191
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| ||||||||| || ||||||||||| || | ||| || ||||||||| |
Sbjct 220192 GCAGCAGGCGCACCGCCGTCTGGATCTCCCGCGACGTGATGGTCGAGCGCTTGTTGTAGT 220251
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
||||||||||| |||||| | ||||||| |||| ||||||||||| ||||||||||
Sbjct 220252 GCGCCAGGCGGGACGCCTCGCCGGCGATGCGCTCGAAGATGTCGTTGACGAACGAGTTCA 220311
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| ||||||||| |||||||||||||||||| ||||||||||
Sbjct 220312 TGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 220371
Query 1485710 AAAC 1485713
| ||
Sbjct 220372 ACAC 220375
>seq667
Length=186015
Score = 210 bits (232), Expect = 3e-48
Identities = 193/244 (79%), Gaps = 0/244 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||||||||||||||| ||||| || || |||||| ||||||| || ||| |||
Sbjct 45515 TGTACTTGGTGACGGCCTTGGTGCCCTCCGACACAGCGTGCTTGGCCAGCTCCCCGGGCA 45456
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| ||| |||||||| || || | |||||||| ||| || ||||||||| |
Sbjct 45455 GCAGCAGCCGCACGGCCGTTTGCACCTCGCGGGACGTGATGGTCGAGCGCTTGTTGTAGT 45396
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
||||||||||| ||||||| || ||||||| || | ||||||||||| ||||||||||
Sbjct 45395 GCGCCAGGCGGGAGGCCTCGCTGGCGATGCGCTCAAAGATGTCGTTGACGAACGAGTTCA 45336
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| |||||||| ||||||||||||||||||||| |||||||
Sbjct 45335 TGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGTGCACCTGCTTGAGGACCTTGT 45276
Query 1485710 AAAC 1485713
| ||
Sbjct 45275 ACAC 45272
Score = 210 bits (232), Expect = 3e-48
Identities = 193/244 (79%), Gaps = 0/244 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||||||||||||||| ||||| || || || ||| ||||||| || ||| |||
Sbjct 50819 TGTACTTGGTGACGGCCTTGGTGCCCTCCGACACAGCATGCTTGGCCAGCTCCCCGGGCA 50878
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| ||| |||||||| ||||| | |||||||| ||| || ||||||||| |
Sbjct 50879 GCAGCAGCCGCACGGCCGTCTGCACCTCGCGGGACGTGATGGTCGAGCGCTTGTTGTAGT 50938
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
||||||||||| ||||||| || ||||||| || | ||||||||||| ||||||||||
Sbjct 50939 GCGCCAGGCGGGAGGCCTCGCTGGCGATGCGCTCAAAGATGTCGTTGACGAACGAGTTCA 50998
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| |||||||| ||||||||||||||||||||| |||||||
Sbjct 50999 TGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGTGCACCTGCTTGAGGACCTTGT 51058
Query 1485710 AAAC 1485713
| ||
Sbjct 51059 ACAC 51062
>seq59
Length=10161055
Score = 100 bits (110), Expect = 5e-15
Identities = 161/228 (71%), Gaps = 4/228 (2%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||||||||| || ||| ||||||| || || | |
Sbjct 6615491 TGTACTTGGTGACAGCCTTGGTGCCCTCTGAGACAGCATGCTTGGCCAGCTCCCCAGGTA 6615550
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGG-TGCCGATCGTGTTGCGCTTGTTAGTG 1485588
| ||| |||||||| ||||||| || |||| | | ||| || || |||
Sbjct 6615551 GCAGCAGACGCACGGCTGTCTGGACTTCCCGGGAAGTCAGGGTTGTCCGGCCTG--AGTA 6615608
Query 1485589 C-GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647
| | ||||| ||| | || || | | || || | || ||||| ||||| |||||
Sbjct 6615609 CTGGGCCAGCCGGGCAGCTTCACCAGCCAGCCGCTCAAAAATATCGTTCACAAAGGAGTT 6615668
Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTG 1485695
|||||| ||| | ||| |||||||| | || |||||||||||
Sbjct 6615669 CATGATGCTCATGGCCTTGGCAGAGATGCCGATATCCGGGTGCACCTG 6615716
>seq31
Length=13776510
Score = 96.9 bits (106), Expect = 5e-14
Identities = 124/171 (73%), Gaps = 0/171 (0%)
Strand=Plus/Plus
Query 1485480 GACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGATCAGGCG 1485539
|| |||| |||| ||||| || || ||||| || | || ||| ||| | |||||
Sbjct 10339356 GAGGGCCATGGTGCCCTCAGACACCGCGTGTTTGTTGATCTCCCCGGGCAGCAGGAGGCG 10339415
Query 1485540 CACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCGCCAGGCG 1485599
||| || ||||||||||| | || | ||| || || | ||| ||| ||||||||
Sbjct 10339416 CACAGCCGTCTGGATCTCTCTGGAGGTGATGGTCGACCGATGGTTCTGGCGGGCCAGGCG 10339475
Query 1485600 GCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCAT 1485650
||||||||| || ||||||| |||| |||||| || | ||||||| |||
Sbjct 10339476 GCCGGCCTCACTGGCGATGCGCTCGAACATGTCCTTAATGAACGAGTCCAT 10339526
Score = 91.5 bits (100), Expect = 2e-12
Identities = 91/118 (77%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 1485535 AGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCGCC 1485594
||||||||||| |||||||| || | || | ||| ||| ||| | ||| ||| |||
Sbjct 10433287 AGGCGCACGGCTGTCTGGATGTCTCTGGAGGTGATGGTGGAGCGATGGTTCTGGCGGGCC 10433346
Query 1485595 AGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGA 1485652
|| ||||||||||| || ||||||| |||| |||||| ||||| || |||| || ||
Sbjct 10433347 AGATGGCCGGCCTCGCTGGCGATGCGCTCGAACATGTCCTTGACGAAGGAGTCCAGGA 10433404
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7914918526355037
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |